FFCP PHASE1:Mm9::chr19:5389924..5389942,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1398|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:5389924..5389942,-|id=chr19:5389924..5389942,-|ontology_enrichment_celltype=CL:0000988!2.84e-16!32;CL:0002032!2.84e-16!32;CL:0000037!2.84e-16!32;CL:0000566!2.84e-16!32;CL:0000837!2.84e-16!32;CL:0000838!9.72e-15!12;CL:0000084!1.50e-13!11;CL:0000827!1.50e-13!11;CL:0000542!2.80e-13!13;CL:0000051!2.80e-13!13;CL:0000791!6.09e-12!9;CL:0000789!6.09e-12!9;CL:0002420!6.09e-12!9;CL:0002419!6.09e-12!9;CL:0000790!6.09e-12!9;CL:0002031!1.66e-11!25;CL:0000624!7.54e-11!8;CL:0000738!3.36e-09!17;CL:0002087!3.36e-09!17;CL:0002320!6.35e-09!46;CL:0000134!6.35e-09!46;CL:0000893!1.01e-08!6;CL:0002489!1.01e-08!6;CL:0000898!1.01e-08!6;CL:0000809!1.01e-08!6;CL:0000810!1.01e-08!6;CL:0000895!1.01e-08!6;CL:0000808!1.01e-08!6;CL:0000894!1.01e-08!6;CL:0000806!1.01e-08!6;CL:0000807!1.01e-08!6;CL:0000805!1.01e-08!6;CL:0002425!1.01e-08!6;CL:0002436!1.01e-08!6;CL:0002427!1.01e-08!6;CL:0002428!1.01e-08!6;CL:0002429!1.01e-08!6;CL:0002433!1.01e-08!6;CL:0002431!1.01e-08!6;CL:0002432!1.01e-08!6;CL:0000063!6.85e-08!66|ontology_enrichment_celltype_v019_2=CL:0000838,2.07e-32,12;CL:0000542,9.35e-30,13;CL:0000051,9.35e-30,13;CL:0000791,1.58e-29,9;CL:0000789,1.58e-29,9;CL:0002420,1.58e-29,9;CL:0002419,1.58e-29,9;CL:0000790,1.58e-29,9;CL:0000084,3.14e-29,11;CL:0000827,3.14e-29,11;CL:0000988,5.69e-27,32;CL:0002032,5.69e-27,32;CL:0000037,5.69e-27,32;CL:0000837,5.69e-27,32;CL:0000624,1.42e-26,8;CL:0000738,2.94e-22,17;CL:0002087,2.94e-22,17;CL:0000893,7.76e-21,6;CL:0002489,7.76e-21,6;CL:0000898,7.76e-21,6;CL:0000809,7.76e-21,6;CL:0000810,7.76e-21,6;CL:0000895,7.76e-21,6;CL:0000808,7.76e-21,6;CL:0000894,7.76e-21,6;CL:0000806,7.76e-21,6;CL:0000807,7.76e-21,6;CL:0000805,7.76e-21,6;CL:0002425,7.76e-21,6;CL:0002436,7.76e-21,6;CL:0002427,7.76e-21,6;CL:0002428,7.76e-21,6;CL:0002429,7.76e-21,6;CL:0002433,7.76e-21,6;CL:0002431,7.76e-21,6;CL:0002432,7.76e-21,6;CL:0002031,1.68e-20,25;CL:0002320,1.08e-17,46;CL:0000134,1.08e-17,46;CL:0000219,1.50e-14,54;CL:0000034,3.96e-12,97;CL:0000723,2.40e-09,91;CL:0000048,2.40e-09,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.14e-08,6|ontology_enrichment_uberon=UBERON:0004177!4.12e-19!29;UBERON:0002193!3.90e-18!48;UBERON:0000072!3.95e-18!27;UBERON:0002390!6.33e-17!45;UBERON:0003061!6.33e-17!45;UBERON:0002370!1.97e-16!23;UBERON:0000974!1.97e-16!23;UBERON:0004807!1.97e-16!23;UBERON:0005058!1.97e-16!23;UBERON:0003351!1.97e-16!23;UBERON:0009113!1.97e-16!23;UBERON:0003295!1.97e-16!23;UBERON:0009722!1.97e-16!23;UBERON:0005562!1.97e-16!23;UBERON:0007690!1.97e-16!23;UBERON:0006562!1.84e-15!24;UBERON:0003408!1.84e-15!24;UBERON:0001557!1.84e-15!24;UBERON:0001042!1.84e-15!24;UBERON:0008814!1.84e-15!24;UBERON:0009145!1.84e-15!24;UBERON:0000063!3.30e-12!35;UBERON:0000065!4.28e-12!41;UBERON:0001004!1.30e-11!42;UBERON:0002405!8.98e-11!70;UBERON:0005057!3.99e-09!51;UBERON:0002384!6.35e-09!46;UBERON:0003081!8.04e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.08e-17,46;UBERON:0000072,1.43e-10,27;UBERON:0002370,2.50e-10,23;UBERON:0000974,2.50e-10,23;UBERON:0004807,2.50e-10,23;UBERON:0005058,2.50e-10,23;UBERON:0003351,2.50e-10,23;UBERON:0009113,2.50e-10,23;UBERON:0003295,2.50e-10,23;UBERON:0009722,2.50e-10,23;UBERON:0005562,2.50e-10,23;UBERON:0007690,2.50e-10,23;UBERON:0006562,7.81e-10,24;UBERON:0003408,7.81e-10,24;UBERON:0001557,7.81e-10,24;UBERON:0001042,7.81e-10,24;UBERON:0008814,7.81e-10,24;UBERON:0009145,7.81e-10,24;UBERON:0004177,7.11e-08,29;UBERON:0005057,7.11e-08,29|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.03298658753261,7.74337971834167,5.61754863172784,3.5955773327356,2.47293692885543,3.93761678841773,2.62261207256992,0,0,0,0.946386496074713,0.822686601634433,0.84877930359606,0.17008658030214,1.48936426801328,0.261199789138935,0,0.68822784320151,0,0,0.215471232685889,0,0,0.443461021310609,3.81018404075779,1.84519436275371,0,0,0,0.204169356262369,1.25559489221072,0,1.0470474879476,0,0,2.42755176515577,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,3.52343472721246,3.62681071005672,2.35265659399725,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0,2.84831672011889,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,2.51611761462433,2.39961092397363,1.14363204365758,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.568326998791185,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.449724224769707,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,1.18984900995699,1.11961161858926,1.52019971184866,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,1.26404448251271,0.405450430580328,0.410843828659309,0.649604114888975,0.537080087002444,0.198681354781265,0.600977247599844,0.590758108698309,1.00966449948148,0.304827226619999,0.907435666231565,0.38983152295901,0.769694733122636,1.40252282617883,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p@chr19:5389924..5389942,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1398 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:5389924..5389942,- | |||
|description=CAGE_peak_at_chr19:5389924..5389942,- | |||
|id=chr19:5389924..5389942,- | |||
|ontology_enrichment_celltype=CL:0000988!2.84e-16!32;CL:0002032!2.84e-16!32;CL:0000037!2.84e-16!32;CL:0000566!2.84e-16!32;CL:0000837!2.84e-16!32;CL:0000838!9.72e-15!12;CL:0000084!1.50e-13!11;CL:0000827!1.50e-13!11;CL:0000542!2.80e-13!13;CL:0000051!2.80e-13!13;CL:0000791!6.09e-12!9;CL:0000789!6.09e-12!9;CL:0002420!6.09e-12!9;CL:0002419!6.09e-12!9;CL:0000790!6.09e-12!9;CL:0002031!1.66e-11!25;CL:0000624!7.54e-11!8;CL:0000738!3.36e-09!17;CL:0002087!3.36e-09!17;CL:0002320!6.35e-09!46;CL:0000134!6.35e-09!46;CL:0000893!1.01e-08!6;CL:0002489!1.01e-08!6;CL:0000898!1.01e-08!6;CL:0000809!1.01e-08!6;CL:0000810!1.01e-08!6;CL:0000895!1.01e-08!6;CL:0000808!1.01e-08!6;CL:0000894!1.01e-08!6;CL:0000806!1.01e-08!6;CL:0000807!1.01e-08!6;CL:0000805!1.01e-08!6;CL:0002425!1.01e-08!6;CL:0002436!1.01e-08!6;CL:0002427!1.01e-08!6;CL:0002428!1.01e-08!6;CL:0002429!1.01e-08!6;CL:0002433!1.01e-08!6;CL:0002431!1.01e-08!6;CL:0002432!1.01e-08!6;CL:0000063!6.85e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.07e-32,12;CL:0000542,9.35e-30,13;CL:0000051,9.35e-30,13;CL:0000791,1.58e-29,9;CL:0000789,1.58e-29,9;CL:0002420,1.58e-29,9;CL:0002419,1.58e-29,9;CL:0000790,1.58e-29,9;CL:0000084,3.14e-29,11;CL:0000827,3.14e-29,11;CL:0000988,5.69e-27,32;CL:0002032,5.69e-27,32;CL:0000037,5.69e-27,32;CL:0000837,5.69e-27,32;CL:0000624,1.42e-26,8;CL:0000738,2.94e-22,17;CL:0002087,2.94e-22,17;CL:0000893,7.76e-21,6;CL:0002489,7.76e-21,6;CL:0000898,7.76e-21,6;CL:0000809,7.76e-21,6;CL:0000810,7.76e-21,6;CL:0000895,7.76e-21,6;CL:0000808,7.76e-21,6;CL:0000894,7.76e-21,6;CL:0000806,7.76e-21,6;CL:0000807,7.76e-21,6;CL:0000805,7.76e-21,6;CL:0002425,7.76e-21,6;CL:0002436,7.76e-21,6;CL:0002427,7.76e-21,6;CL:0002428,7.76e-21,6;CL:0002429,7.76e-21,6;CL:0002433,7.76e-21,6;CL:0002431,7.76e-21,6;CL:0002432,7.76e-21,6;CL:0002031,1.68e-20,25;CL:0002320,1.08e-17,46;CL:0000134,1.08e-17,46;CL:0000219,1.50e-14,54;CL:0000034,3.96e-12,97;CL:0000723,2.40e-09,91;CL:0000048,2.40e-09,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.14e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.12e-19!29;UBERON:0002193!3.90e-18!48;UBERON:0000072!3.95e-18!27;UBERON:0002390!6.33e-17!45;UBERON:0003061!6.33e-17!45;UBERON:0002370!1.97e-16!23;UBERON:0000974!1.97e-16!23;UBERON:0004807!1.97e-16!23;UBERON:0005058!1.97e-16!23;UBERON:0003351!1.97e-16!23;UBERON:0009113!1.97e-16!23;UBERON:0003295!1.97e-16!23;UBERON:0009722!1.97e-16!23;UBERON:0005562!1.97e-16!23;UBERON:0007690!1.97e-16!23;UBERON:0006562!1.84e-15!24;UBERON:0003408!1.84e-15!24;UBERON:0001557!1.84e-15!24;UBERON:0001042!1.84e-15!24;UBERON:0008814!1.84e-15!24;UBERON:0009145!1.84e-15!24;UBERON:0000063!3.30e-12!35;UBERON:0000065!4.28e-12!41;UBERON:0001004!1.30e-11!42;UBERON:0002405!8.98e-11!70;UBERON:0005057!3.99e-09!51;UBERON:0002384!6.35e-09!46;UBERON:0003081!8.04e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.08e-17,46;UBERON:0000072,1.43e-10,27;UBERON:0002370,2.50e-10,23;UBERON:0000974,2.50e-10,23;UBERON:0004807,2.50e-10,23;UBERON:0005058,2.50e-10,23;UBERON:0003351,2.50e-10,23;UBERON:0009113,2.50e-10,23;UBERON:0003295,2.50e-10,23;UBERON:0009722,2.50e-10,23;UBERON:0005562,2.50e-10,23;UBERON:0007690,2.50e-10,23;UBERON:0006562,7.81e-10,24;UBERON:0003408,7.81e-10,24;UBERON:0001557,7.81e-10,24;UBERON:0001042,7.81e-10,24;UBERON:0008814,7.81e-10,24;UBERON:0009145,7.81e-10,24;UBERON:0004177,7.11e-08,29;UBERON:0005057,7.11e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.03298658753261,7.74337971834167,5.61754863172784,3.5955773327356,2.47293692885543,3.93761678841773,2.62261207256992,0,0,0,0.946386496074713,0.822686601634433,0.84877930359606,0.17008658030214,1.48936426801328,0.261199789138935,0,0.68822784320151,0,0,0.215471232685889,0,0,0.443461021310609,3.81018404075779,1.84519436275371,0,0,0,0.204169356262369,1.25559489221072,0,1.0470474879476,0,0,2.42755176515577,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,3.52343472721246,3.62681071005672,2.35265659399725,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0,2.84831672011889,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,2.51611761462433,2.39961092397363,1.14363204365758,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.568326998791185,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.449724224769707,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,1.18984900995699,1.11961161858926,1.52019971184866,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,1.26404448251271,0.405450430580328,0.410843828659309,0.649604114888975,0.537080087002444,0.198681354781265,0.600977247599844,0.590758108698309,1.00966449948148,0.304827226619999,0.907435666231565,0.38983152295901,0.769694733122636,1.40252282617883,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr19:5389924..5389942,- | |||
}} |
Latest revision as of 08:10, 4 August 2015
Short description: | p@chr19:5389924..5389942, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5389924..5389942, - |
Coexpression cluster: | MCL_coexpression_mm9:1398 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.08e-17 | 46 |
segment of respiratory tract | 1.43e-10 | 27 |
thymus | 2.50e-10 | 23 |
neck | 2.50e-10 | 23 |
respiratory system epithelium | 2.50e-10 | 23 |
hemolymphoid system gland | 2.50e-10 | 23 |
pharyngeal epithelium | 2.50e-10 | 23 |
thymic region | 2.50e-10 | 23 |
pharyngeal gland | 2.50e-10 | 23 |
entire pharyngeal arch endoderm | 2.50e-10 | 23 |
thymus primordium | 2.50e-10 | 23 |
early pharyngeal endoderm | 2.50e-10 | 23 |
pharynx | 7.81e-10 | 24 |
gland of gut | 7.81e-10 | 24 |
upper respiratory tract | 7.81e-10 | 24 |
chordate pharynx | 7.81e-10 | 24 |
pharyngeal arch system | 7.81e-10 | 24 |
pharyngeal region of foregut | 7.81e-10 | 24 |
hemopoietic organ | 7.11e-08 | 29 |
immune organ | 7.11e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.14e-08 | 6 |