FFCP PHASE1:Mm9::chr1:139987046..139987054,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=250|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:139987046..139987054,-|id=chr1:139987046..139987054,-|ontology_enrichment_celltype=CL:0000838!1.66e-15!12;CL:0000084!9.69e-15!11;CL:0000827!9.69e-15!11;CL:0000542!4.65e-14!13;CL:0000051!4.65e-14!13;CL:0000791!6.94e-13!9;CL:0000789!6.94e-13!9;CL:0002420!6.94e-13!9;CL:0002419!6.94e-13!9;CL:0000790!6.94e-13!9;CL:0000624!1.37e-11!8;CL:0000738!5.41e-10!17;CL:0002087!5.41e-10!17;CL:0000988!5.79e-10!32;CL:0002032!5.79e-10!32;CL:0000037!5.79e-10!32;CL:0000566!5.79e-10!32;CL:0000837!5.79e-10!32;CL:0002031!1.06e-09!25;CL:0000893!5.71e-09!6;CL:0002489!5.71e-09!6;CL:0000898!5.71e-09!6;CL:0000809!5.71e-09!6;CL:0000810!5.71e-09!6;CL:0000895!5.71e-09!6;CL:0000808!5.71e-09!6;CL:0000894!5.71e-09!6;CL:0000806!5.71e-09!6;CL:0000807!5.71e-09!6;CL:0000805!5.71e-09!6;CL:0002425!5.71e-09!6;CL:0002436!5.71e-09!6;CL:0002427!5.71e-09!6;CL:0002428!5.71e-09!6;CL:0002429!5.71e-09!6;CL:0002433!5.71e-09!6;CL:0002431!5.71e-09!6;CL:0002432!5.71e-09!6|ontology_enrichment_celltype_v019_2=CL:0000791,2.26e-08,9;CL:0000789,2.26e-08,9;CL:0002420,2.26e-08,9;CL:0002419,2.26e-08,9;CL:0000790,2.26e-08,9;CL:0000084,7.12e-07,11;CL:0000827,7.12e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.90e-23!29;UBERON:0002370!1.55e-20!23;UBERON:0000974!1.55e-20!23;UBERON:0004807!1.55e-20!23;UBERON:0005058!1.55e-20!23;UBERON:0003351!1.55e-20!23;UBERON:0009113!1.55e-20!23;UBERON:0003295!1.55e-20!23;UBERON:0009722!1.55e-20!23;UBERON:0005562!1.55e-20!23;UBERON:0007690!1.55e-20!23;UBERON:0006562!1.99e-19!24;UBERON:0003408!1.99e-19!24;UBERON:0001557!1.99e-19!24;UBERON:0001042!1.99e-19!24;UBERON:0008814!1.99e-19!24;UBERON:0009145!1.99e-19!24;UBERON:0002390!6.10e-18!45;UBERON:0003061!6.10e-18!45;UBERON:0002193!1.42e-17!48;UBERON:0000072!1.33e-16!27;UBERON:0005057!2.26e-16!51;UBERON:0000065!2.74e-15!41;UBERON:0002405!8.17e-15!70;UBERON:0001004!9.43e-15!42;UBERON:0000063!1.74e-11!35;UBERON:0005911!1.00e-10!69;UBERON:0001041!1.77e-10!92;UBERON:0003929!6.87e-10!55;UBERON:0000077!1.89e-09!97;UBERON:0002368!2.66e-09!60;UBERON:0002530!5.97e-09!65;UBERON:0003081!7.89e-09!88;UBERON:0000490!5.16e-08!66;UBERON:0003104!5.84e-08!131;UBERON:0009142!5.84e-08!131;UBERON:0001007!1.07e-07!128;UBERON:0001555!1.07e-07!128;UBERON:0007026!1.07e-07!128;UBERON:0004119!2.00e-07!130;UBERON:0000925!2.00e-07!130;UBERON:0006595!2.00e-07!130;UBERON:0004921!2.07e-07!126;UBERON:0004185!2.07e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.07e-25,29;UBERON:0005057,1.07e-25,29;UBERON:0002370,1.09e-23,23;UBERON:0000974,1.09e-23,23;UBERON:0004807,1.09e-23,23;UBERON:0005058,1.09e-23,23;UBERON:0003351,1.09e-23,23;UBERON:0009113,1.09e-23,23;UBERON:0003295,1.09e-23,23;UBERON:0009722,1.09e-23,23;UBERON:0005562,1.09e-23,23;UBERON:0007690,1.09e-23,23;UBERON:0006562,1.24e-22,24;UBERON:0003408,1.24e-22,24;UBERON:0001557,1.24e-22,24;UBERON:0001042,1.24e-22,24;UBERON:0008814,1.24e-22,24;UBERON:0009145,1.24e-22,24;UBERON:0000077,5.90e-21,35;UBERON:0000072,6.14e-20,27;UBERON:0002390,7.43e-16,45;UBERON:0003061,7.43e-16,45;UBERON:0002193,9.73e-15,48;UBERON:0002405,9.73e-15,48;UBERON:0007811,1.54e-14,36;UBERON:0000065,1.46e-12,41;UBERON:0001004,3.20e-12,42;UBERON:0000153,6.74e-12,43;UBERON:0003929,7.93e-11,55;UBERON:0002368,9.16e-10,60;UBERON:0001041,1.53e-09,80;UBERON:0002530,7.27e-09,65;UBERON:0000490,1.06e-08,66;UBERON:0005911,3.08e-08,69;UBERON:0000949,8.17e-08,72;UBERON:0003081,3.39e-07,87|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,2.111830832275,0.70219357896598,1.54096171402954,0.638177271962691,0.513602189793617,0.524522414513984,0,0,0,0.630924330716475,0.685572168028694,0.42438965179803,0,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,5.75072826109418,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.370389054739423,0,1.50363650493128,1.14389086603261,0.339956859987711,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.202725215290164,0.102710957164827,0.77952493786677,0,0.39736270956253,3.24527713703916,1.77227432609493,2.42319479875554,2.13379058634,3.62974266492626,2.33898913775406,2.5977197242889,2.33753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:139987046..139987054,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=250 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:139987046..139987054,- | |||
|description=CAGE_peak_at_chr1:139987046..139987054,- | |||
|id=chr1:139987046..139987054,- | |||
|ontology_enrichment_celltype=CL:0000838!1.66e-15!12;CL:0000084!9.69e-15!11;CL:0000827!9.69e-15!11;CL:0000542!4.65e-14!13;CL:0000051!4.65e-14!13;CL:0000791!6.94e-13!9;CL:0000789!6.94e-13!9;CL:0002420!6.94e-13!9;CL:0002419!6.94e-13!9;CL:0000790!6.94e-13!9;CL:0000624!1.37e-11!8;CL:0000738!5.41e-10!17;CL:0002087!5.41e-10!17;CL:0000988!5.79e-10!32;CL:0002032!5.79e-10!32;CL:0000037!5.79e-10!32;CL:0000566!5.79e-10!32;CL:0000837!5.79e-10!32;CL:0002031!1.06e-09!25;CL:0000893!5.71e-09!6;CL:0002489!5.71e-09!6;CL:0000898!5.71e-09!6;CL:0000809!5.71e-09!6;CL:0000810!5.71e-09!6;CL:0000895!5.71e-09!6;CL:0000808!5.71e-09!6;CL:0000894!5.71e-09!6;CL:0000806!5.71e-09!6;CL:0000807!5.71e-09!6;CL:0000805!5.71e-09!6;CL:0002425!5.71e-09!6;CL:0002436!5.71e-09!6;CL:0002427!5.71e-09!6;CL:0002428!5.71e-09!6;CL:0002429!5.71e-09!6;CL:0002433!5.71e-09!6;CL:0002431!5.71e-09!6;CL:0002432!5.71e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.26e-08,9;CL:0000789,2.26e-08,9;CL:0002420,2.26e-08,9;CL:0002419,2.26e-08,9;CL:0000790,2.26e-08,9;CL:0000084,7.12e-07,11;CL:0000827,7.12e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.90e-23!29;UBERON:0002370!1.55e-20!23;UBERON:0000974!1.55e-20!23;UBERON:0004807!1.55e-20!23;UBERON:0005058!1.55e-20!23;UBERON:0003351!1.55e-20!23;UBERON:0009113!1.55e-20!23;UBERON:0003295!1.55e-20!23;UBERON:0009722!1.55e-20!23;UBERON:0005562!1.55e-20!23;UBERON:0007690!1.55e-20!23;UBERON:0006562!1.99e-19!24;UBERON:0003408!1.99e-19!24;UBERON:0001557!1.99e-19!24;UBERON:0001042!1.99e-19!24;UBERON:0008814!1.99e-19!24;UBERON:0009145!1.99e-19!24;UBERON:0002390!6.10e-18!45;UBERON:0003061!6.10e-18!45;UBERON:0002193!1.42e-17!48;UBERON:0000072!1.33e-16!27;UBERON:0005057!2.26e-16!51;UBERON:0000065!2.74e-15!41;UBERON:0002405!8.17e-15!70;UBERON:0001004!9.43e-15!42;UBERON:0000063!1.74e-11!35;UBERON:0005911!1.00e-10!69;UBERON:0001041!1.77e-10!92;UBERON:0003929!6.87e-10!55;UBERON:0000077!1.89e-09!97;UBERON:0002368!2.66e-09!60;UBERON:0002530!5.97e-09!65;UBERON:0003081!7.89e-09!88;UBERON:0000490!5.16e-08!66;UBERON:0003104!5.84e-08!131;UBERON:0009142!5.84e-08!131;UBERON:0001007!1.07e-07!128;UBERON:0001555!1.07e-07!128;UBERON:0007026!1.07e-07!128;UBERON:0004119!2.00e-07!130;UBERON:0000925!2.00e-07!130;UBERON:0006595!2.00e-07!130;UBERON:0004921!2.07e-07!126;UBERON:0004185!2.07e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.07e-25,29;UBERON:0005057,1.07e-25,29;UBERON:0002370,1.09e-23,23;UBERON:0000974,1.09e-23,23;UBERON:0004807,1.09e-23,23;UBERON:0005058,1.09e-23,23;UBERON:0003351,1.09e-23,23;UBERON:0009113,1.09e-23,23;UBERON:0003295,1.09e-23,23;UBERON:0009722,1.09e-23,23;UBERON:0005562,1.09e-23,23;UBERON:0007690,1.09e-23,23;UBERON:0006562,1.24e-22,24;UBERON:0003408,1.24e-22,24;UBERON:0001557,1.24e-22,24;UBERON:0001042,1.24e-22,24;UBERON:0008814,1.24e-22,24;UBERON:0009145,1.24e-22,24;UBERON:0000077,5.90e-21,35;UBERON:0000072,6.14e-20,27;UBERON:0002390,7.43e-16,45;UBERON:0003061,7.43e-16,45;UBERON:0002193,9.73e-15,48;UBERON:0002405,9.73e-15,48;UBERON:0007811,1.54e-14,36;UBERON:0000065,1.46e-12,41;UBERON:0001004,3.20e-12,42;UBERON:0000153,6.74e-12,43;UBERON:0003929,7.93e-11,55;UBERON:0002368,9.16e-10,60;UBERON:0001041,1.53e-09,80;UBERON:0002530,7.27e-09,65;UBERON:0000490,1.06e-08,66;UBERON:0005911,3.08e-08,69;UBERON:0000949,8.17e-08,72;UBERON:0003081,3.39e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,2.111830832275,0.70219357896598,1.54096171402954,0.638177271962691,0.513602189793617,0.524522414513984,0,0,0,0.630924330716475,0.685572168028694,0.42438965179803,0,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,5.75072826109418,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.370389054739423,0,1.50363650493128,1.14389086603261,0.339956859987711,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.202725215290164,0.102710957164827,0.77952493786677,0,0.39736270956253,3.24527713703916,1.77227432609493,2.42319479875554,2.13379058634,3.62974266492626,2.33898913775406,2.5977197242889,2.33753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:139987046..139987054,- | |||
}} |
Latest revision as of 22:08, 4 August 2015
Short description: | p@chr1:139987046..139987054, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:139987046..139987054, - |
Coexpression cluster: | MCL_coexpression_mm9:250 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.26e-08 | 9 |
alpha-beta T cell | 2.26e-08 | 9 |
immature T cell | 2.26e-08 | 9 |
mature T cell | 2.26e-08 | 9 |
immature alpha-beta T cell | 2.26e-08 | 9 |
T cell | 7.12e-07 | 11 |
pro-T cell | 7.12e-07 | 11 |