FFCP PHASE1:Hg19::chr6:26199162..26199173,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4767 | |||
|TSSclassifier=strong | |||
|UniProt=P68431 | |||
|association_with_transcript=290bp_to_NM_003530,uc003ngv.2_5end | |||
|description=CAGE_peak_18_at_HIST1H3D_5end | |||
|id=chr6:26199162..26199173,- | |||
|ontology_enrichment_celltype=CL:0000945!4.21e-14!24;CL:0000826!4.21e-14!24;CL:0000838!2.91e-11!52;CL:0000542!6.70e-11!53;CL:0000051!6.70e-11!53;CL:0000236!9.87e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.65e-13;5!CL:0000236;2.83e-11;13!CL:0000945;1.54e-10;24!CL:1000746;1.13e-09;7!CL:1000612;1.13e-09;7!CL:0000054;5.93e-09;2!CL:0002593;5.93e-09;2!CL:0000137;5.93e-09;2!CL:0000092;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.23e-13,5;CL:0000945,1.41e-10,24;CL:0000826,1.41e-10,24;CL:0000236,1.67e-10,14;CL:1000746,1.04e-09,7;CL:1000612,1.04e-09,7;CL:0000054,5.94e-09,2;CL:0000137,5.94e-09,2;CL:0000092,5.94e-09,2;CL:0002593,7.49e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.78e-15!51;DOID:0060083!2.78e-15!51;DOID:162!2.94e-15!235;DOID:14566!3.72e-15!239;DOID:0060058!6.20e-11!10;DOID:0050686!2.84e-10!137;DOID:1240!1.63e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:9119;5.10e-17;1!DOID:0060085;1.41e-16;1!DOID:3165;1.41e-16;1!DOID:0060121;1.41e-16;1!DOID:2438;1.41e-16;1!DOID:4418;1.41e-16;1!DOID:200;5.93e-09;2!DOID:4305;5.93e-09;2!DOID:0060058;4.95e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,5.53e-17,1;DOID:0060085,1.41e-16,1;DOID:3165,1.41e-16,1;DOID:0060121,1.41e-16,1;DOID:2438,1.41e-16,1;DOID:4418,1.41e-16,1;DOID:200,5.94e-09,2;DOID:4305,5.94e-09,2;DOID:0060058,3.77e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.13e-09;7!UBERON:0001229;1.13e-09;7!UBERON:0002456;5.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,3.60e-12,12;UBERON:0010532,1.04e-09,7;UBERON:0000074,1.04e-09,7;UBERON:0001229,1.04e-09,7;UBERON:0001230,1.04e-09,7;UBERON:0003220,1.04e-09,7;UBERON:0005749,1.04e-09,7;UBERON:0004199,1.04e-09,7;UBERON:0004209,1.04e-09,7;UBERON:0004198,1.04e-09,7;UBERON:0002456,7.49e-09,2;UBERON:0005103,1.31e-08,8;UBERON:0000083,1.31e-08,8;UBERON:0009201,1.31e-08,8;UBERON:0006553,1.31e-08,8;UBERON:0003074,1.31e-08,8;UBERON:0003060,1.31e-08,8;UBERON:0000080,9.52e-08,9;UBERON:0002120,9.52e-08,9;UBERON:0004875,9.52e-08,9;UBERON:0005721,9.52e-08,9;UBERON:0005754,9.52e-08,9;UBERON:0007297,9.52e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.408001382488506,0,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.629686250509434,0,0,0,0,0.30120591877825,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0,0.400395987036012,0,1.32208974556972,0.954053754535364,0,2.34894875748376,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0.260118695119756,0.328875809207352,0.552700035571697,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0.284567373393656,0.159426272728822,0.399158742865633,0.191505370132367,0,0.324621940274555,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,2.33150377598474,0,0,0,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0.333926115068718,0.659215496907038,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0.167821586975843,0.948768663620925,0.635746315921515,0,0,0.565412285735763,0,0,0,0,0,0,0.104421949505455,0,0,0,0.91227394607833,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0.432164393964449,0,0,0.135904206073614,0.104602846312333,0.611989305817931,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0.338693328263138,0,0,0.321506296930038,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.82092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,1.58330377895165,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0.327130788511688,0,0,0.422624246717254,0.39997479170986,0.320075189082423,0.861074898304078,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0.667388411352415,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,1.00918676322552,0,0,0,0,0,0,0,0.162806537221949,0.533636729388577,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p18@HIST1H3D | |||
}} |
Revision as of 10:35, 22 January 2014
Short description: | p18@HIST1H3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_HIST1H3D_5end |
Coexpression cluster: | NA |
Association with transcript: | 290bp_to_NM_003530, uc003ngv.2_5end |
EntrezGene: | HIST1H3D |
HGNC: | 4767 |
UniProt: | P68431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.23e-13 | 5 |
lymphocyte of B lineage | 1.41e-10 | 24 |
pro-B cell | 1.41e-10 | 24 |
B cell | 1.67e-10 | 14 |
glomerular cell | 1.04e-09 | 7 |
kidney corpuscule cell | 1.04e-09 | 7 |
bone matrix secreting cell | 5.94e-09 | 2 |
osteocyte | 5.94e-09 | 2 |
osteoclast | 5.94e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intraembryonic coelom | 3.60e-12 | 12 |
primitive nephron | 1.04e-09 | 7 |
renal glomerulus | 1.04e-09 | 7 |
renal corpuscle | 1.04e-09 | 7 |
glomerular capsule | 1.04e-09 | 7 |
metanephric mesenchyme | 1.04e-09 | 7 |
glomerular tuft | 1.04e-09 | 7 |
S-shaped body | 1.04e-09 | 7 |
renal vesicle | 1.04e-09 | 7 |
comma-shaped body | 1.04e-09 | 7 |
internal thoracic artery | 7.49e-09 | 2 |
mesonephric epithelium | 1.31e-08 | 8 |
mesonephric tubule | 1.31e-08 | 8 |
nephric duct | 1.31e-08 | 8 |
renal duct | 1.31e-08 | 8 |
mesonephric duct | 1.31e-08 | 8 |
pronephric duct | 1.31e-08 | 8 |
mesonephros | 9.52e-08 | 9 |
pronephros | 9.52e-08 | 9 |
nephrogenic cord | 9.52e-08 | 9 |
pronephric mesoderm | 9.52e-08 | 9 |
rostral part of nephrogenic cord | 9.52e-08 | 9 |
presumptive pronephric mesoderm | 9.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 5.53e-17 | 1 |
organ system benign neoplasm | 1.41e-16 | 1 |
skin benign neoplasm | 1.41e-16 | 1 |
integumentary system benign neoplasm | 1.41e-16 | 1 |
dermis tumor | 1.41e-16 | 1 |
cutaneous fibrous histiocytoma | 1.41e-16 | 1 |
giant cell tumor | 5.94e-09 | 2 |
bone giant cell tumor | 5.94e-09 | 2 |
lymphoma | 3.77e-07 | 10 |