FFCP PHASE1:Hg19::chr6:52441770..52441784,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9697 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16855 | |||
|TSSclassifier=strong | |||
|UniProt=Q15035 | |||
|association_with_transcript=-57bp_to_ENST00000182527_5end | |||
|coexpression_cluster_id=C4613 | |||
|description=CAGE_peak_2_at_TRAM2_5end | |||
|id=chr6:52441770..52441784,- | |||
|ontology_enrichment_celltype=CL:0000055!2.43e-45!180;CL:0000057!5.61e-30!75;CL:0000222!3.64e-20!119;CL:0000144!2.14e-16!625;CL:0002371!1.60e-15!591;CL:0000680!8.50e-15!57;CL:0000056!8.50e-15!57;CL:0000355!8.50e-15!57;CL:0002620!1.05e-13!23;CL:0000183!1.12e-13!59;CL:0000187!2.94e-13!54;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000048!2.45e-12!430;CL:0000012!4.70e-12!682;CL:0000220!6.80e-12!246;CL:0000723!2.48e-11!436;CL:0002321!2.50e-11!248;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000393!1.75e-10!60;CL:0000211!1.75e-10!60;CL:0000034!4.27e-10!444;CL:0000359!5.98e-08!32;CL:0002334!9.32e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.41e-17;23!CL:0000057;1.90e-14;73!CL:0002320;6.20e-11;188!CL:0000192;2.05e-09;43!CL:0000187;2.16e-09;55!CL:0000134;3.26e-09;55!CL:0000359;2.54e-08;32!CL:0002334;5.28e-08;12!CL:0000723;8.47e-08;61!CL:0000048;1.42e-07;58!CL:0002494;2.24e-07;16!CL:0000393;5.88e-07;61!CL:0000211;5.88e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.45e-36,76;CL:0000048,4.15e-21,427;CL:0000222,1.74e-20,121;CL:0000723,7.39e-20,433;CL:0000034,2.89e-18,441;CL:0000680,6.16e-18,58;CL:0000056,6.16e-18,58;CL:0000355,6.16e-18,58;CL:0002620,9.73e-17,23;CL:0000187,5.02e-16,55;CL:0000192,7.68e-13,43;CL:0000514,7.68e-13,43;CL:0000393,9.28e-13,61;CL:0000211,9.28e-13,61;CL:0002320,1.46e-10,361;CL:0002321,3.89e-10,250;CL:0000359,9.24e-09,32;CL:0000134,1.85e-08,354;CL:0000219,2.11e-08,386;CL:0002334,4.61e-08,12;CL:0002494,1.26e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;4.85e-10;58!CL:0000514;2.05e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.39e-20!83;UBERON:0002329!5.39e-20!83;UBERON:0003077!5.39e-20!83;UBERON:0003059!5.39e-20!83;UBERON:0007282!5.39e-20!83;UBERON:0009618!5.39e-20!83;UBERON:0007285!5.39e-20!83;UBERON:0004290!7.25e-18!70;UBERON:0000486!3.92e-15!82;UBERON:0005256!4.43e-15!143;UBERON:0002049!6.57e-15!79;UBERON:0007798!6.57e-15!79;UBERON:0002385!1.64e-13!63;UBERON:0001015!1.64e-13!63;UBERON:0000383!1.64e-13!63;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0004872!8.22e-13!84;UBERON:0000490!2.35e-12!138;UBERON:0000055!4.33e-12!69;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0001981!6.48e-11!60;UBERON:0007500!6.48e-11!60;UBERON:0004537!6.48e-11!60;UBERON:0006965!6.48e-11!60;UBERON:0001637!1.95e-10!42;UBERON:0003509!1.95e-10!42;UBERON:0004572!1.95e-10!42;UBERON:0004535!2.54e-10!110;UBERON:0002100!2.74e-10!216;UBERON:0003914!2.92e-10!118;UBERON:0002097!9.05e-10!40;UBERON:0001009!1.56e-09!113;UBERON:0003102!1.95e-09!95;UBERON:0000475!4.40e-09!365;UBERON:0004573!9.81e-09!33;UBERON:0004571!9.81e-09!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.70e-10;41!UBERON:0002384;1.78e-10;198!UBERON:0002199;8.55e-10;46!UBERON:0002416;8.55e-10;46!UBERON:0001637;1.31e-09;42!UBERON:0003509;1.31e-09;42!UBERON:0004572;1.31e-09;42!UBERON:0004573;9.94e-09;33!UBERON:0004571;9.94e-09;33!UBERON:0003102;2.57e-08;50!UBERON:0002067;1.37e-07;9!UBERON:0002204;3.33e-07;70!UBERON:0001434;4.28e-07;36!UBERON:0002049;4.71e-07;75!UBERON:0007798;4.71e-07;75!UBERON:0007500;5.68e-07;56!UBERON:0001981;5.68e-07;56!UBERON:0004537;5.68e-07;56!UBERON:0000055;8.06e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.52e-22,71;UBERON:0003059,6.52e-22,71;UBERON:0007282,6.52e-22,71;UBERON:0004290,6.52e-22,71;UBERON:0009618,6.52e-22,71;UBERON:0007524,1.35e-21,73;UBERON:0007503,2.09e-21,78;UBERON:0003077,2.85e-21,72;UBERON:0007285,2.85e-21,72;UBERON:0000486,4.69e-18,83;UBERON:0000490,8.52e-18,148;UBERON:0001134,1.85e-16,62;UBERON:0002036,1.85e-16,62;UBERON:0003082,1.85e-16,62;UBERON:0002385,5.57e-16,64;UBERON:0001015,5.57e-16,64;UBERON:0000383,5.57e-16,64;UBERON:0005256,7.71e-16,122;UBERON:0002049,2.72e-15,78;UBERON:0007798,2.72e-15,78;UBERON:0002199,3.15e-15,46;UBERON:0002416,3.15e-15,46;UBERON:0002097,1.93e-13,41;UBERON:0004872,1.98e-13,83;UBERON:0004535,1.02e-12,109;UBERON:0003104,1.28e-12,160;UBERON:0009142,1.28e-12,160;UBERON:0000055,6.04e-12,68;UBERON:0001637,7.78e-12,42;UBERON:0003509,7.78e-12,42;UBERON:0004572,7.78e-12,42;UBERON:0001009,9.05e-12,112;UBERON:0002384,5.65e-11,371;UBERON:0007500,1.76e-10,59;UBERON:0001981,1.76e-10,59;UBERON:0004537,1.76e-10,59;UBERON:0006965,1.76e-10,59;UBERON:0004573,1.05e-09,33;UBERON:0004571,1.05e-09,33;UBERON:0003914,1.77e-09,117;UBERON:0003102,5.18e-09,99;UBERON:0000926,5.52e-09,315;UBERON:0004120,5.52e-09,315;UBERON:0006603,5.52e-09,315;UBERON:0002100,4.54e-08,199;UBERON:0002067,1.47e-07,9;UBERON:0004016,1.47e-07,9;UBERON:0010083,1.47e-07,9 | |||
|phase1_expression=5.81370813665781,6.20891519283851,7.04772020479856,3.00219895059391,4.02264984984559,1.74467704820074,2.53299878168311,8.84407822797563,1.56711376919903,3.19454117451962,0,1.31064823278103,0.263766978228454,8.16857929536308,9.94192127183747,1.34465029290355,1.80808358407193,2.92124036154949,2.92759679274304,2.46242116153576,8.56802903225863,2.82109249330279,0.572471974262113,1.36874425072884,2.38531015230125,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0.154934401160603,0,0,1.10799081706375,0.401088894940283,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0.633765858935825,0,0,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,4.87613732627923,2.68280343881454,2.04580098949649,9.03597880961416,11.5307719446255,7.82171202388448,0.795285947051099,1.94653948121054,1.98523116044542,2.66075276955077,2.81071314218003,0.392937226493138,0,0,0,0,0.26591592103773,0,0,0,3.9752481473341,6.02164216574287,3.47140501607594,2.82653970962005,3.35599548967925,2.20094433552054,2.92592953151535,3.87625138753993,3.5576626268671,3.68192674041137,1.20848795132744,1.52054421143703,0.732186172644509,2.94130464276695,3.24056779152704,1.7859945656816,0.44905874525234,0.225222960966644,3.06633274931766,1.89853131913626,1.28241220751285,0,0,0.436094052142534,10.933382937297,5.31848148991235,7.81214166797991,14.0549944166919,6.02936249737207,3.92474320099615,5.33744978648525,7.89336154934912,8.09148692039392,3.77189881795127,3.43269996538263,7.87058623753643,2.88087962239999,2.57753575017176,5.61888138294577,9.12754914471119,15.2437654162837,4.22764195117554,10.3598684395604,12.0787693763934,8.37032102145062,3.31652656741774,5.26961483996404,2.37600571456411,4.69807165629258,10.9219363432563,8.62341770179486,2.86171393721913,3.37820003654303,14.6843981206617,10.9744405220209,16.243853177348,5.55880817954408,2.26864366320042,14.5305604907978,8.75585294156127,9.53693555218028,21.606558918077,10.4083054530823,9.01741890159702,10.6086608109006,14.1772119082664,5.16416127354353,10.8546522924969,10.3095886479375,3.23292113637624,20.9455659584802,8.56392834934942,8.30846902321389,0.386521706326594,0.545492241181669,0.860413786167011,0,0,0,0.10366105501537,0.252320850875628,0,10.9514672630871,10.935095949279,8.28809528114883,9.75172648867156,14.4375896333917,0.473227200159376,0.674338760312407,0.964044119533928,0.330881918197182,0.653638332277218,0,0.539325232640658,0.784885860501384,0,5.16708818237254,4.20725321410337,3.2925920906512,4.41026134156626,1.26755034821831,1.96565443335525,1.77236972004421,0,0.491953754172454,1.88724591328378,0,0,0.100528972411631,0.648119116109707,0.977424915930974,3.11980435583874,1.44331342025273,1.62302566965108,3.99189560401794,0.288732895522148,0,1.52203321787679,0,0,0.246217006087397,0.234004265139238,0,0,0.671928512795438,0.425325291727159,0,0.290633938513962,0,0.492663237895943,0,0,0.288239906833923,0.25248486685276,0.126995788584338,0.381988425558278,1.17217447210047,0,1.02827492703324,0,0.857479297891735,9.86753542239174,7.41132117016576,7.0404754388112,2.19761916788222,3.57656445851882,5.071816515336,4.5209479819428,9.36066932202295,6.68739173081569,15.6034045225606,14.9196420249016,3.57444984145369,0,1.64648067356154,4.56030658011229,1.77695974371273,2.37585561880029,2.71295439353627,2.61460037580088,1.59956785891291,0,0,0,8.86611965318856,14.9320516584348,2.85273810081437,13.1750989067497,12.328579353023,7.16243852959582,0,0.591092280605782,0.431255149719035,0.256686072559497,0.76228387266739,0,0,0.167516265334349,0,0,0,0,8.46571292862065,13.0044335475516,9.76554085319048,16.8456397839954,18.735043823702,11.6699787125112,12.5341314042203,6.3198680942821,6.82222512167955,11.3820378421755,9.29915837949611,6.45292089895961,4.17041349446798,11.7480694477644,5.49029478097369,0,0,0.426910231213777,0,1.66435439510497,0,6.4508030032882,9.36118037057181,8.13914273855913,10.1229927912004,5.62877973973374,8.04269605718038,5.93672265779964,4.31787142647436,5.50441348470694,8.86973284949139,3.63478100428535,5.92672930145792,0.604297247958111,0,0,1.83703117063371,1.0925470080403,1.31124414959424,0,0,0.784349769176855,0,0,3.4120015221269,1.19065593693561,1.0795795805107,1.54227252690289,2.70946437543853,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,1.96808787419823,0,0.721287081534056,1.92295876118521,3.21787049690293,1.72279661398852,0.650060246036521,11.2478750890912,2.32009723901093,1.84858340537573,2.76306614507033,5.37562632689669,2.0409846524972,2.75531718437034,3.664744978892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| |||
|short_description=p2@TRAM2 | |||
}} |
Revision as of 12:18, 22 January 2014
Short description: | p2@TRAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAM2_5end |
Coexpression cluster: | C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic |
Association with transcript: | -57bp_to_ENST00000182527_5end |
EntrezGene: | TRAM2 |
HGNC: | 16855 |
UniProt: | Q15035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.45e-36 | 76 |
multi fate stem cell | 4.15e-21 | 427 |
mesodermal cell | 1.74e-20 | 121 |
somatic stem cell | 7.39e-20 | 433 |
stem cell | 2.89e-18 | 441 |
muscle precursor cell | 6.16e-18 | 58 |
myoblast | 6.16e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.16e-18 | 58 |
skin fibroblast | 9.73e-17 | 23 |
muscle cell | 5.02e-16 | 55 |
smooth muscle cell | 7.68e-13 | 43 |
smooth muscle myoblast | 7.68e-13 | 43 |
electrically responsive cell | 9.28e-13 | 61 |
electrically active cell | 9.28e-13 | 61 |
connective tissue cell | 1.46e-10 | 361 |
embryonic cell | 3.89e-10 | 250 |
vascular associated smooth muscle cell | 9.24e-09 | 32 |
mesenchymal cell | 1.85e-08 | 354 |
motile cell | 2.11e-08 | 386 |
preadipocyte | 4.61e-08 | 12 |
cardiocyte | 1.26e-07 | 16 |