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FFCP PHASE1:Mm9::chr2:119625310..119625328,+: Difference between revisions

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{{FFCP|EntrezGene=22174|HGNC=|MCL_coexpression_id=2326|UniProt=P55144|association_with_transcript=60bp_to_ENSMUST00000028763,NM_019392,uc008luq.1_5end|description=CAGE_peak_4_at_Tyro3_5end|id=chr2:119625310..119625328,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.10e-14!75;UBERON:0001016!8.10e-14!75;UBERON:0004121!9.88e-14!102;UBERON:0000924!9.88e-14!102;UBERON:0006601!9.88e-14!102;UBERON:0001017!1.36e-13!73;UBERON:0005743!1.36e-13!73;UBERON:0000955!2.19e-11!50;UBERON:0006238!2.19e-11!50;UBERON:0002616!8.61e-11!49;UBERON:0001049!1.23e-10!52;UBERON:0005068!1.23e-10!52;UBERON:0006241!1.23e-10!52;UBERON:0007135!1.23e-10!52;UBERON:0000033!2.17e-09!63;UBERON:0002021!1.86e-08!10;UBERON:0000411!1.86e-08!10;UBERON:0001950!1.86e-08!10;UBERON:0002020!5.04e-08!34;UBERON:0003080!7.29e-08!40;UBERON:0002346!1.00e-07!71;UBERON:0003075!1.00e-07!71;UBERON:0007284!1.00e-07!71;UBERON:0002791!1.30e-07!29;UBERON:0003528!1.30e-07!29;UBERON:0001893!1.30e-07!29;UBERON:0002780!1.75e-07!39;UBERON:0001890!1.75e-07!39;UBERON:0006240!1.75e-07!39;UBERON:0000956!5.31e-07!21;UBERON:0001869!5.31e-07!21;UBERON:0000203!5.31e-07!21;UBERON:0002619!7.84e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.78e-17,54;UBERON:0001017,2.92e-16,73;UBERON:0000955,9.44e-16,47;UBERON:0006238,9.44e-16,47;UBERON:0001016,1.53e-15,75;UBERON:0001049,1.58e-15,52;UBERON:0005068,1.58e-15,52;UBERON:0006241,1.58e-15,52;UBERON:0007135,1.58e-15,52;UBERON:0002021,2.20e-15,10;UBERON:0000411,2.20e-15,10;UBERON:0001950,2.20e-15,10;UBERON:0002616,1.11e-14,46;UBERON:0004121,2.00e-14,95;UBERON:0000924,2.00e-14,95;UBERON:0006601,2.00e-14,95;UBERON:0010371,4.62e-13,73;UBERON:0002346,5.34e-12,64;UBERON:0003075,5.34e-12,64;UBERON:0007284,5.34e-12,64;UBERON:0003528,4.38e-11,29;UBERON:0002791,4.38e-11,29;UBERON:0001893,4.38e-11,29;UBERON:0002020,7.27e-11,34;UBERON:0003080,7.40e-11,40;UBERON:0002780,3.57e-10,39;UBERON:0001890,3.57e-10,39;UBERON:0006240,3.57e-10,39;UBERON:0002619,1.44e-09,17;UBERON:0000956,1.03e-08,21;UBERON:0001869,1.03e-08,21;UBERON:0000203,1.03e-08,21;UBERON:0000473,5.62e-08,14;UBERON:0003056,9.17e-08,49;UBERON:0003135,2.75e-07,15|phase1_expression=0.480446541314382,0,0.454999239389536,0,0.500895729946347,0,0,0,0.422366166455,0.468129052643987,0,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,1.56478268869608,0,0.439372365468944,0.194429899074283,0,2.87505128729943,0,0,0,0.514518872071894,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0,1.10115880999389,1.40456071893706,1.68967186581868,0,0.182975287204819,0,3.35019598801657,1.12552522006336,1.5279824777681,0,1.42371680799103,0.372798891650601,0.454357159999104,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0,0,0.323533699894818,0,0,1.86391761218122,4.9772735491963,2.72280718857492,0.255457055208591,0,0,0,1.49790639404823,6.40500843946077,1.38219787324151,9.73416193076748,11.7629110371952,3.74018480207208,4.2182728397617,0.611036183101898,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.468508622798644,0.258703370739016,0.646703978798527,0,0,0.219195732427575,1.11218899690239,1.74126083261083,1.02891068203972,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,0.308713837137853,1.98251269790279,0,0.426576501070468,0.696710015581316,0.515469845288373,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0,0,0.469380496577004,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0,0.163863314715738,0,0.433947175744535,0,0,1.47529281905711,0.551873492609465,2.24770825982909,2.69586879162067,0.163934945376675,0.252470927204373,0.94652465824877,0,1.72338718186239,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,9.3183181762324,0.709700426041343,0.712262414669021,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.258717367565509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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:22174
|HGNC=
|MCL_coexpression_id=2326
|TSSclassifier=NA
|UniProt=uniprot:P55144
|association_with_transcript=60bp_to_ENSMUST00000028763,NM_019392,uc008luq.1_5end
|cluster_id=chr2:119625310..119625328,+
|description=CAGE_peak_4_at_Tyro3_5end
|id=chr2:119625310..119625328,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.10e-14!75;UBERON:0001016!8.10e-14!75;UBERON:0004121!9.88e-14!102;UBERON:0000924!9.88e-14!102;UBERON:0006601!9.88e-14!102;UBERON:0001017!1.36e-13!73;UBERON:0005743!1.36e-13!73;UBERON:0000955!2.19e-11!50;UBERON:0006238!2.19e-11!50;UBERON:0002616!8.61e-11!49;UBERON:0001049!1.23e-10!52;UBERON:0005068!1.23e-10!52;UBERON:0006241!1.23e-10!52;UBERON:0007135!1.23e-10!52;UBERON:0000033!2.17e-09!63;UBERON:0002021!1.86e-08!10;UBERON:0000411!1.86e-08!10;UBERON:0001950!1.86e-08!10;UBERON:0002020!5.04e-08!34;UBERON:0003080!7.29e-08!40;UBERON:0002346!1.00e-07!71;UBERON:0003075!1.00e-07!71;UBERON:0007284!1.00e-07!71;UBERON:0002791!1.30e-07!29;UBERON:0003528!1.30e-07!29;UBERON:0001893!1.30e-07!29;UBERON:0002780!1.75e-07!39;UBERON:0001890!1.75e-07!39;UBERON:0006240!1.75e-07!39;UBERON:0000956!5.31e-07!21;UBERON:0001869!5.31e-07!21;UBERON:0000203!5.31e-07!21;UBERON:0002619!7.84e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.78e-17,54;UBERON:0001017,2.92e-16,73;UBERON:0000955,9.44e-16,47;UBERON:0006238,9.44e-16,47;UBERON:0001016,1.53e-15,75;UBERON:0001049,1.58e-15,52;UBERON:0005068,1.58e-15,52;UBERON:0006241,1.58e-15,52;UBERON:0007135,1.58e-15,52;UBERON:0002021,2.20e-15,10;UBERON:0000411,2.20e-15,10;UBERON:0001950,2.20e-15,10;UBERON:0002616,1.11e-14,46;UBERON:0004121,2.00e-14,95;UBERON:0000924,2.00e-14,95;UBERON:0006601,2.00e-14,95;UBERON:0010371,4.62e-13,73;UBERON:0002346,5.34e-12,64;UBERON:0003075,5.34e-12,64;UBERON:0007284,5.34e-12,64;UBERON:0003528,4.38e-11,29;UBERON:0002791,4.38e-11,29;UBERON:0001893,4.38e-11,29;UBERON:0002020,7.27e-11,34;UBERON:0003080,7.40e-11,40;UBERON:0002780,3.57e-10,39;UBERON:0001890,3.57e-10,39;UBERON:0006240,3.57e-10,39;UBERON:0002619,1.44e-09,17;UBERON:0000956,1.03e-08,21;UBERON:0001869,1.03e-08,21;UBERON:0000203,1.03e-08,21;UBERON:0000473,5.62e-08,14;UBERON:0003056,9.17e-08,49;UBERON:0003135,2.75e-07,15
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0.500895729946347,0,0,0,0.422366166455,0.468129052643987,0,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,1.56478268869608,0,0.439372365468944,0.194429899074283,0,2.87505128729943,0,0,0,0.514518872071894,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0,1.10115880999389,1.40456071893706,1.68967186581868,0,0.182975287204819,0,3.35019598801657,1.12552522006336,1.5279824777681,0,1.42371680799103,0.372798891650601,0.454357159999104,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0,0,0.323533699894818,0,0,1.86391761218122,4.9772735491963,2.72280718857492,0.255457055208591,0,0,0,1.49790639404823,6.40500843946077,1.38219787324151,9.73416193076748,11.7629110371952,3.74018480207208,4.2182728397617,0.611036183101898,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.468508622798644,0.258703370739016,0.646703978798527,0,0,0.219195732427575,1.11218899690239,1.74126083261083,1.02891068203972,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,0.308713837137853,1.98251269790279,0,0.426576501070468,0.696710015581316,0.515469845288373,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0,0,0.469380496577004,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0,0.163863314715738,0,0.433947175744535,0,0,1.47529281905711,0.551873492609465,2.24770825982909,2.69586879162067,0.163934945376675,0.252470927204373,0.94652465824877,0,1.72338718186239,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,9.3183181762324,0.709700426041343,0.712262414669021,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0,0.469343416127421,0.21183207086382,0.220528398054962,0.8244312647074,1.45317984026315,0.965006798850494,2.02932984805332,1.47726809770555,0.291480836629851,2.78137953015765,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.406638934253697,1.62008011232702,1.67270636811575,1.74690050996942,1.88810084938749,1.65306911450672,4.18809507174447,0.129614973291793,0,0.56369293868419,2.8408143748356,2.81279433777066,2.72231663681667,1.80823752868824,3.04121025883401,4.3422178298929,6.38001485735356,3.46035836604846,1.20792060413003,1.44015003128933,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,2.49403421976732,0,0.179427713218951,0.167884616364078,1.54551675225752,0.93841237725591,0.549454872801795,4.50173596066038,0,7.34177395402186,4.60325236507177,9.73922372846974,3.78077001156113,7.53590771747707,4.5323633843382,14.1754725048679,13.9599572999508,12.6879874515577,12.9440077937955,0,0,0,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.463537303779422,0.77163688185482,0,0.588795680537589,0,0.177475806159338,0,0.726732083161643,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,1.35034627686799,1.24905288968973,0.467863216890817,1.07435527024149,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p4@Tyro3
}}

Revision as of 20:49, 3 August 2015

Short description:p4@Tyro3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tyro3_5end
Coexpression cluster:MCL_coexpression_mm9:2326
Association with transcript: 60bp_to_ENSMUST00000028763, NM_019392, uc008luq.1_5end
EntrezGene:22174
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Tyro3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I46.38
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.78e-1754
central nervous system2.92e-1673
brain9.44e-1647
future brain9.44e-1647
nervous system1.53e-1575
neural tube1.58e-1552
neural rod1.58e-1552
future spinal cord1.58e-1552
neural keel1.58e-1552
occipital lobe2.20e-1510
visual cortex2.20e-1510
neocortex2.20e-1510
regional part of brain1.11e-1446
ectoderm-derived structure2.00e-1495
ectoderm2.00e-1495
presumptive ectoderm2.00e-1495
ecto-epithelium4.62e-1373
neurectoderm5.34e-1264
neural plate5.34e-1264
presumptive neural plate5.34e-1264
brain grey matter4.38e-1129
regional part of telencephalon4.38e-1129
telencephalon4.38e-1129
gray matter7.27e-1134
anterior neural tube7.40e-1140
regional part of forebrain3.57e-1039
forebrain3.57e-1039
future forebrain3.57e-1039
regional part of cerebral cortex1.44e-0917
cerebral cortex1.03e-0821
cerebral hemisphere1.03e-0821
pallium1.03e-0821
testis5.62e-0814
pre-chordal neural plate9.17e-0849
male reproductive organ2.75e-0715
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