FFCP PHASE1:Mm9::chr2:73112323..73112364,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=184|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:73112323..73112364,+|id=chr2:73112323..73112364,+|ontology_enrichment_celltype=CL:0000117!3.33e-15!23;CL:0000337!3.33e-15!23;CL:0000540!2.16e-12!33;CL:0000047!2.16e-12!33;CL:0000031!2.16e-12!33;CL:0000404!2.16e-12!33;CL:0002609!2.82e-11!6;CL:0002319!7.03e-11!43;CL:0000221!1.62e-10!44;CL:0000133!1.62e-10!44;CL:0000393!8.68e-10!39;CL:0000211!8.68e-10!39;CL:0000055!1.16e-08!50;CL:0002608!4.37e-07!3|ontology_enrichment_celltype_v019_2=CL:0002608,1.31e-33,3;CL:0002609,3.20e-17,6;CL:0000117,3.46e-17,23;CL:0000337,3.46e-17,23;CL:0002613,1.46e-15,3;CL:0000540,5.10e-12,33;CL:0000047,5.10e-12,33;CL:0000031,5.10e-12,33;CL:0000404,5.10e-12,33;CL:0000393,3.52e-10,39;CL:0000211,3.52e-10,39;CL:0002319,3.09e-09,43;CL:0000221,5.01e-09,44;CL:0000133,5.01e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.67e-11!73;UBERON:0005743!9.67e-11!73;UBERON:0002020!2.37e-10!34;UBERON:0000073!2.85e-10!75;UBERON:0001016!2.85e-10!75;UBERON:0000955!3.33e-10!50;UBERON:0006238!3.33e-10!50;UBERON:0002791!8.62e-10!29;UBERON:0003528!8.62e-10!29;UBERON:0001893!8.62e-10!29;UBERON:0001954!1.48e-09!7;UBERON:0003022!1.48e-09!7;UBERON:0002421!1.48e-09!7;UBERON:0000349!1.48e-09!7;UBERON:0002600!1.48e-09!7;UBERON:0002616!3.36e-09!49;UBERON:0002780!1.06e-08!39;UBERON:0001890!1.06e-08!39;UBERON:0006240!1.06e-08!39;UBERON:0003080!2.23e-08!40;UBERON:0001049!3.26e-08!52;UBERON:0005068!3.26e-08!52;UBERON:0006241!3.26e-08!52;UBERON:0007135!3.26e-08!52;UBERON:0000033!5.87e-08!63;UBERON:0004121!8.16e-08!102;UBERON:0000924!8.16e-08!102;UBERON:0006601!8.16e-08!102;UBERON:0003056!4.62e-07!49;UBERON:0000369!7.00e-07!5;UBERON:0002435!7.00e-07!5;UBERON:0000204!7.00e-07!5;UBERON:0010082!7.00e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.92e-20,5;UBERON:0002435,1.92e-20,5;UBERON:0000204,1.92e-20,5;UBERON:0010082,1.92e-20,5;UBERON:0001954,7.21e-15,7;UBERON:0003022,7.21e-15,7;UBERON:0002421,7.21e-15,7;UBERON:0000349,7.21e-15,7;UBERON:0002600,7.21e-15,7;UBERON:0003528,8.94e-14,29;UBERON:0002791,8.94e-14,29;UBERON:0001893,8.94e-14,29;UBERON:0002420,4.65e-13,8;UBERON:0007245,4.65e-13,8;UBERON:0010009,4.65e-13,8;UBERON:0010011,4.65e-13,8;UBERON:0000454,4.65e-13,8;UBERON:0002020,9.17e-12,34;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0002780,2.90e-10,39;UBERON:0001890,2.90e-10,39;UBERON:0006240,2.90e-10,39;UBERON:0003080,5.22e-10,40;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002616,1.05e-08,46;UBERON:0003056,3.58e-08,49;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52;UBERON:0000073,2.06e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.210324961351382,0,0.220868540951614,2.20483438586917,3.83381884072945,1.83843757322004,0,0.255374676170375,0.46081959976873,1.45074916503213,3.01909223887952,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,3.01570445070875,0,0,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0,0,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr2:73112323..73112364,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:73112323..73112364,+ | |||
|description=CAGE_peak_at_chr2:73112323..73112364,+ | |||
|id=chr2:73112323..73112364,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.33e-15!23;CL:0000337!3.33e-15!23;CL:0000540!2.16e-12!33;CL:0000047!2.16e-12!33;CL:0000031!2.16e-12!33;CL:0000404!2.16e-12!33;CL:0002609!2.82e-11!6;CL:0002319!7.03e-11!43;CL:0000221!1.62e-10!44;CL:0000133!1.62e-10!44;CL:0000393!8.68e-10!39;CL:0000211!8.68e-10!39;CL:0000055!1.16e-08!50;CL:0002608!4.37e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.31e-33,3;CL:0002609,3.20e-17,6;CL:0000117,3.46e-17,23;CL:0000337,3.46e-17,23;CL:0002613,1.46e-15,3;CL:0000540,5.10e-12,33;CL:0000047,5.10e-12,33;CL:0000031,5.10e-12,33;CL:0000404,5.10e-12,33;CL:0000393,3.52e-10,39;CL:0000211,3.52e-10,39;CL:0002319,3.09e-09,43;CL:0000221,5.01e-09,44;CL:0000133,5.01e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.67e-11!73;UBERON:0005743!9.67e-11!73;UBERON:0002020!2.37e-10!34;UBERON:0000073!2.85e-10!75;UBERON:0001016!2.85e-10!75;UBERON:0000955!3.33e-10!50;UBERON:0006238!3.33e-10!50;UBERON:0002791!8.62e-10!29;UBERON:0003528!8.62e-10!29;UBERON:0001893!8.62e-10!29;UBERON:0001954!1.48e-09!7;UBERON:0003022!1.48e-09!7;UBERON:0002421!1.48e-09!7;UBERON:0000349!1.48e-09!7;UBERON:0002600!1.48e-09!7;UBERON:0002616!3.36e-09!49;UBERON:0002780!1.06e-08!39;UBERON:0001890!1.06e-08!39;UBERON:0006240!1.06e-08!39;UBERON:0003080!2.23e-08!40;UBERON:0001049!3.26e-08!52;UBERON:0005068!3.26e-08!52;UBERON:0006241!3.26e-08!52;UBERON:0007135!3.26e-08!52;UBERON:0000033!5.87e-08!63;UBERON:0004121!8.16e-08!102;UBERON:0000924!8.16e-08!102;UBERON:0006601!8.16e-08!102;UBERON:0003056!4.62e-07!49;UBERON:0000369!7.00e-07!5;UBERON:0002435!7.00e-07!5;UBERON:0000204!7.00e-07!5;UBERON:0010082!7.00e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.92e-20,5;UBERON:0002435,1.92e-20,5;UBERON:0000204,1.92e-20,5;UBERON:0010082,1.92e-20,5;UBERON:0001954,7.21e-15,7;UBERON:0003022,7.21e-15,7;UBERON:0002421,7.21e-15,7;UBERON:0000349,7.21e-15,7;UBERON:0002600,7.21e-15,7;UBERON:0003528,8.94e-14,29;UBERON:0002791,8.94e-14,29;UBERON:0001893,8.94e-14,29;UBERON:0002420,4.65e-13,8;UBERON:0007245,4.65e-13,8;UBERON:0010009,4.65e-13,8;UBERON:0010011,4.65e-13,8;UBERON:0000454,4.65e-13,8;UBERON:0002020,9.17e-12,34;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0002780,2.90e-10,39;UBERON:0001890,2.90e-10,39;UBERON:0006240,2.90e-10,39;UBERON:0003080,5.22e-10,40;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002616,1.05e-08,46;UBERON:0003056,3.58e-08,49;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52;UBERON:0000073,2.06e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.210324961351382,0,0.220868540951614,2.20483438586917,3.83381884072945,1.83843757322004,0,0.255374676170375,0.46081959976873,1.45074916503213,3.01909223887952,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,3.01570445070875,0,0,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0,0,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr2:73112323..73112364,+ | |||
}} |
Latest revision as of 10:46, 5 August 2015
Short description: | p@chr2:73112323..73112364, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:73112323..73112364, + |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.31e-33 | 3 |
neuron of cerebral cortex | 3.20e-17 | 6 |
CNS neuron (sensu Vertebrata) | 3.46e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.46e-17 | 23 |
striatum neuron | 1.46e-15 | 3 |
neuron | 5.10e-12 | 33 |
neuronal stem cell | 5.10e-12 | 33 |
neuroblast | 5.10e-12 | 33 |
electrically signaling cell | 5.10e-12 | 33 |
electrically responsive cell | 3.52e-10 | 39 |
electrically active cell | 3.52e-10 | 39 |
neural cell | 3.09e-09 | 43 |
ectodermal cell | 5.01e-09 | 44 |
neurectodermal cell | 5.01e-09 | 44 |