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FFCP PHASE1:Mm9::chr6:55417434..55417435,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:55417434..55417435,+|id=chr6:55417434..55417435,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,2.53e-11,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.08e-14!71;UBERON:0003075!5.08e-14!71;UBERON:0007284!5.08e-14!71;UBERON:0001017!1.40e-13!73;UBERON:0005743!1.40e-13!73;UBERON:0000073!1.37e-12!75;UBERON:0001016!1.37e-12!75;UBERON:0004121!2.09e-12!102;UBERON:0000924!2.09e-12!102;UBERON:0006601!2.09e-12!102;UBERON:0001049!3.10e-11!52;UBERON:0005068!3.10e-11!52;UBERON:0006241!3.10e-11!52;UBERON:0007135!3.10e-11!52;UBERON:0000955!8.63e-10!50;UBERON:0006238!8.63e-10!50;UBERON:0002020!3.25e-09!34;UBERON:0002616!3.47e-09!49;UBERON:0002021!3.29e-08!10;UBERON:0000411!3.29e-08!10;UBERON:0001950!3.29e-08!10;UBERON:0000033!5.47e-08!63;UBERON:0003080!5.93e-08!40;UBERON:0002791!1.43e-07!29;UBERON:0003528!1.43e-07!29;UBERON:0001893!1.43e-07!29;UBERON:0002780!1.99e-07!39;UBERON:0001890!1.99e-07!39;UBERON:0006240!1.99e-07!39;UBERON:0003056!7.42e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-25,73;UBERON:0001016,1.76e-24,75;UBERON:0001049,7.32e-19,52;UBERON:0005068,7.32e-19,52;UBERON:0006241,7.32e-19,52;UBERON:0007135,7.32e-19,52;UBERON:0004121,2.09e-18,95;UBERON:0000924,2.09e-18,95;UBERON:0006601,2.09e-18,95;UBERON:0000955,3.12e-18,47;UBERON:0006238,3.12e-18,47;UBERON:0000073,9.68e-18,54;UBERON:0002021,2.03e-17,10;UBERON:0000411,2.03e-17,10;UBERON:0001950,2.03e-17,10;UBERON:0002616,7.42e-17,46;UBERON:0002346,7.76e-17,64;UBERON:0003075,7.76e-17,64;UBERON:0007284,7.76e-17,64;UBERON:0010371,6.71e-15,73;UBERON:0002619,2.82e-13,17;UBERON:0003080,3.05e-13,40;UBERON:0002020,3.89e-13,34;UBERON:0010314,4.21e-13,92;UBERON:0003528,1.58e-12,29;UBERON:0002791,1.58e-12,29;UBERON:0001893,1.58e-12,29;UBERON:0000956,3.29e-12,21;UBERON:0001869,3.29e-12,21;UBERON:0000203,3.29e-12,21;UBERON:0002780,4.10e-12,39;UBERON:0001890,4.10e-12,39;UBERON:0006240,4.10e-12,39;UBERON:0002410,2.53e-11,9;UBERON:0003056,7.71e-10,49;UBERON:0000010,5.53e-09,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.856952953211411,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.510749352340751,1.53606533256243,0.131886287730194,0.731901148819277,0,0.558365998002762,3.37657566019008,1.98637722109853,1.47314292736834,2.42031857358475,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,1.73485326766136,0.608930956624282,0.691846491768175,0.904335843315735,1.88141931417128,0.628332956648377,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.24685959107234,0.915001205637253,1.13088916901578,2.60736480288415,2.04572365864264,2.49345653471472,1.29793010454206,0.407357455401265,0,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.374806898238915,0.776110112217047,0.215567992932842,0.378212160335639,0,0,0,0,0.411564272815887,1.59227413454795,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.656669856316381,0.324275238183423,0.584799949701329,0,0.402619256281115,2.10289948564127,1.3377599609307,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0.201683524623343,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0.342745537829186,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,1.9266070798535,2.10981035865966,0,0.252470927204373,2.2085575359138,0.390438744296638,2.58508077279359,1.43381278771531,1.55959071857676,1.13230612315533,1.61924280669958,2.92255857911312,1.97643888973262,8.9969968598106,0.283880170416537,0.35613120733451,0.488660878060728,0.989820737835213,0,0.971122544619926,0.906970670894253,0.377210159511796,0,0.614870295887855,0.516856586336442,1.45413491791002,0,0,0,0,1.36175842301515,0.18006109403131,0,0.428674070063185,0,0,0.164549020602121,0.304464949114599,0,0,0,1.15420377059036,0.161464426695906,0.180938774784468,0.119372344003136,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.648032044930808,0.627264888043406,0.87345025498471,1.34864346384821,0.578574190077352,0.523511883968059,0.388844919875379,0,0,0.598066184175915,1.48912641411388,2.52786544847262,0.904118764344118,1.68956125490778,1.76035857968631,1.5624526181274,0.419437377702843,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0.375364950902364,0,0.643105137237198,0,2.82375921308533,2.30162618253588,1.71868654031819,2.749650917499,1.37016503954128,3.7769694869485,2.70009000092722,2.70192721934532,3.62513927187364,1.03552062350364,0,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0,1.23621034343337,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0.952587382566147,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0.887379030796687,0.238436189947321,0.726732083161643,0.470546902076653,0.423073039458382,0.182927972872773,0.789209134313529,0.950628796921032,0.561142271657738,0.711810108745045,0.492522411877817,0,0,0.578719832943424,1.24905288968973,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843|short_description=p@chr6:55417434..55417435,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr6:55417434..55417435,+
|description=CAGE_peak_at_chr6:55417434..55417435,+
|id=chr6:55417434..55417435,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,2.53e-11,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.08e-14!71;UBERON:0003075!5.08e-14!71;UBERON:0007284!5.08e-14!71;UBERON:0001017!1.40e-13!73;UBERON:0005743!1.40e-13!73;UBERON:0000073!1.37e-12!75;UBERON:0001016!1.37e-12!75;UBERON:0004121!2.09e-12!102;UBERON:0000924!2.09e-12!102;UBERON:0006601!2.09e-12!102;UBERON:0001049!3.10e-11!52;UBERON:0005068!3.10e-11!52;UBERON:0006241!3.10e-11!52;UBERON:0007135!3.10e-11!52;UBERON:0000955!8.63e-10!50;UBERON:0006238!8.63e-10!50;UBERON:0002020!3.25e-09!34;UBERON:0002616!3.47e-09!49;UBERON:0002021!3.29e-08!10;UBERON:0000411!3.29e-08!10;UBERON:0001950!3.29e-08!10;UBERON:0000033!5.47e-08!63;UBERON:0003080!5.93e-08!40;UBERON:0002791!1.43e-07!29;UBERON:0003528!1.43e-07!29;UBERON:0001893!1.43e-07!29;UBERON:0002780!1.99e-07!39;UBERON:0001890!1.99e-07!39;UBERON:0006240!1.99e-07!39;UBERON:0003056!7.42e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-25,73;UBERON:0001016,1.76e-24,75;UBERON:0001049,7.32e-19,52;UBERON:0005068,7.32e-19,52;UBERON:0006241,7.32e-19,52;UBERON:0007135,7.32e-19,52;UBERON:0004121,2.09e-18,95;UBERON:0000924,2.09e-18,95;UBERON:0006601,2.09e-18,95;UBERON:0000955,3.12e-18,47;UBERON:0006238,3.12e-18,47;UBERON:0000073,9.68e-18,54;UBERON:0002021,2.03e-17,10;UBERON:0000411,2.03e-17,10;UBERON:0001950,2.03e-17,10;UBERON:0002616,7.42e-17,46;UBERON:0002346,7.76e-17,64;UBERON:0003075,7.76e-17,64;UBERON:0007284,7.76e-17,64;UBERON:0010371,6.71e-15,73;UBERON:0002619,2.82e-13,17;UBERON:0003080,3.05e-13,40;UBERON:0002020,3.89e-13,34;UBERON:0010314,4.21e-13,92;UBERON:0003528,1.58e-12,29;UBERON:0002791,1.58e-12,29;UBERON:0001893,1.58e-12,29;UBERON:0000956,3.29e-12,21;UBERON:0001869,3.29e-12,21;UBERON:0000203,3.29e-12,21;UBERON:0002780,4.10e-12,39;UBERON:0001890,4.10e-12,39;UBERON:0006240,4.10e-12,39;UBERON:0002410,2.53e-11,9;UBERON:0003056,7.71e-10,49;UBERON:0000010,5.53e-09,11
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.856952953211411,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.510749352340751,1.53606533256243,0.131886287730194,0.731901148819277,0,0.558365998002762,3.37657566019008,1.98637722109853,1.47314292736834,2.42031857358475,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,1.73485326766136,0.608930956624282,0.691846491768175,0.904335843315735,1.88141931417128,0.628332956648377,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.24685959107234,0.915001205637253,1.13088916901578,2.60736480288415,2.04572365864264,2.49345653471472,1.29793010454206,0.407357455401265,0,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.374806898238915,0.776110112217047,0.215567992932842,0.378212160335639,0,0,0,0,0.411564272815887,1.59227413454795,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.656669856316381,0.324275238183423,0.584799949701329,0,0.402619256281115,2.10289948564127,1.3377599609307,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0.201683524623343,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0.342745537829186,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,1.9266070798535,2.10981035865966,0,0.252470927204373,2.2085575359138,0.390438744296638,2.58508077279359,1.43381278771531,1.55959071857676,1.13230612315533,1.61924280669958,2.92255857911312,1.97643888973262,8.9969968598106,0.283880170416537,0.35613120733451,0.488660878060728,0.989820737835213,0,0.971122544619926,0.906970670894253,0.377210159511796,0,0.614870295887855,0.516856586336442,1.45413491791002,0,0,0,0,1.36175842301515,0.18006109403131,0,0.428674070063185,0,0,0.164549020602121,0.304464949114599,0,0,0,1.15420377059036,0.161464426695906,0.180938774784468,0.119372344003136,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.648032044930808,0.627264888043406,0.87345025498471,1.34864346384821,0.578574190077352,0.523511883968059,0.388844919875379,0,0,0.598066184175915,1.48912641411388,2.52786544847262,0.904118764344118,1.68956125490778,1.76035857968631,1.5624526181274,0.419437377702843,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0.375364950902364,0,0.643105137237198,0,2.82375921308533,2.30162618253588,1.71868654031819,2.749650917499,1.37016503954128,3.7769694869485,2.70009000092722,2.70192721934532,3.62513927187364,1.03552062350364,0,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0,1.23621034343337,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0.952587382566147,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0.887379030796687,0.238436189947321,0.726732083161643,0.470546902076653,0.423073039458382,0.182927972872773,0.789209134313529,0.950628796921032,0.561142271657738,0.711810108745045,0.492522411877817,0,0,0.578719832943424,1.24905288968973,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843
|short_description=p@chr6:55417434..55417435,+
}}

Latest revision as of 23:45, 5 August 2015

Short description:p@chr6:55417434..55417435, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:55417434..55417435, +
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr6:55417434..55417435+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron2.53e-119

Uber anatomy
Ontology termp-valuen
central nervous system2.02e-2573
nervous system1.76e-2475
neural tube7.32e-1952
neural rod7.32e-1952
future spinal cord7.32e-1952
neural keel7.32e-1952
ectoderm-derived structure2.09e-1895
ectoderm2.09e-1895
presumptive ectoderm2.09e-1895
brain3.12e-1847
future brain3.12e-1847
regional part of nervous system9.68e-1854
occipital lobe2.03e-1710
visual cortex2.03e-1710
neocortex2.03e-1710
regional part of brain7.42e-1746
neurectoderm7.76e-1764
neural plate7.76e-1764
presumptive neural plate7.76e-1764
ecto-epithelium6.71e-1573
regional part of cerebral cortex2.82e-1317
anterior neural tube3.05e-1340
gray matter3.89e-1334
structure with developmental contribution from neural crest4.21e-1392
brain grey matter1.58e-1229
regional part of telencephalon1.58e-1229
telencephalon1.58e-1229
cerebral cortex3.29e-1221
cerebral hemisphere3.29e-1221
pallium3.29e-1221
regional part of forebrain4.10e-1239
forebrain4.10e-1239
future forebrain4.10e-1239
autonomic nervous system2.53e-119
pre-chordal neural plate7.71e-1049
peripheral nervous system5.53e-0911
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