FFCP PHASE1:Hg19::chrX:80377162..80377180,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79366 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8013 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JSL0 | |||
|association_with_transcript=1bp_to_ENST00000430960_5end | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_2_at_HMGN5_5end | |||
|id=chrX:80377162..80377180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.46e-08;29 | |||
|ontology_enrichment_disease=DOID:2531!1.93e-15!51;DOID:0060083!1.93e-15!51;DOID:1240!2.40e-14!39;DOID:8692!1.64e-11!31;DOID:14566!6.93e-11!239;DOID:162!1.16e-10!235;DOID:0050686!3.15e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.09e-14;39!DOID:8692;5.74e-13;31!DOID:2531;7.56e-12;51!DOID:0060083;7.56e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.30e-19,51;DOID:0060083,5.30e-19,51;DOID:1240,5.18e-17,39;DOID:162,3.38e-14,235;DOID:14566,8.66e-14,239;DOID:8692,2.00e-13,31;DOID:0050686,9.00e-12,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.37e-08!57;UBERON:0005068!1.37e-08!57;UBERON:0006241!1.37e-08!57;UBERON:0007135!1.37e-08!57;UBERON:0003080!3.35e-08!42;UBERON:0002780!3.95e-08!41;UBERON:0001890!3.95e-08!41;UBERON:0006240!3.95e-08!41;UBERON:0005743!1.69e-07!86;UBERON:0001017!1.77e-07!82;UBERON:0002346!1.77e-07!90;UBERON:0007023!4.46e-07!115;UBERON:0002616!8.33e-07!59;UBERON:0003056!9.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.82e-08;9!UBERON:0001557;5.82e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.47e-08,41;UBERON:0001890,1.47e-08,41;UBERON:0003080,1.47e-08,41;UBERON:0006240,1.47e-08,41;UBERON:0001049,1.70e-08,56;UBERON:0005068,1.70e-08,56;UBERON:0006241,1.70e-08,56;UBERON:0007135,1.70e-08,56;UBERON:0001017,4.14e-08,81;UBERON:0000073,4.90e-08,53;UBERON:0002616,4.90e-08,53;UBERON:0001737,6.02e-08,9;UBERON:0011216,2.85e-07,223;UBERON:0001016,3.22e-07,89;UBERON:0007023,3.30e-07,114 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.281908808191942,0,0,0,0,0.631719873426831,0,0.737201809504527,0,0.218441372130172,0.791300934685361,2.22779435328084,0.994192127183747,0.672325146451775,0,0.730310090387373,0.487932798790507,0.61560529038394,0,0,4.86601178122796,1.23186982565596,1.63205431473244,20.1731391174591,18.144230268438,22.5112834557123,0.393364276848904,1.53531759238885,0,0.919421224478927,0.30120591877825,0,20.8386769561011,0.710846162437108,4.69760702935756,0.553995408531877,0.401088894940283,0,1.11957737119962,0.647787332037959,1.28787783817093,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,0,1.1507695692886,0,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0,2.14258724659632,0,0,0,0.598390972864896,0,0.580418477257168,0,0.622822248995575,1.7587406567972,0.521482918420201,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0,0,0.44931452458598,0.150176892841506,0,0,0,0,0,0,0,1.28019066769952,0,1.14950487990897,0.661044872784862,1.90810750907073,0,0.587237189370939,0.764546456250458,3.96513985737078,0.560508562981536,4.74091352595139,0.393419540227666,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0.25618263945135,0.520237390239513,2.30213066445147,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0.679856056185397,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.602300476311091,0.383959833463255,0,0.710331756132051,0,0.80642697289893,0.534880391567015,0.579297615531196,0,4.02420515822182,0.767175371061182,0,0,0,0.795285947051099,0,3.97046232089085,3.32594096193846,2.45937399940753,1.30979075497713,0,0.741568885568859,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0.371457501329565,0,0,0,1.13061588384802,0.838998872419812,1.6507082516404,0.626984899610432,0.775250277507987,1.06729878806013,1.00416183829401,0.402829317109147,0,0,1.47065232138347,0,3.30408994651095,3.36794058939255,1.68917220724983,0,0,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.662045904066094,0.573673241497627,0.709336764396714,0.560677600142307,0,0.49333509683432,0.933633106199299,0.269421344139376,0.980771418680752,0.151357427644931,0,0.234321431833797,0,0,1.04614076386261,0.587172493218824,0.971237666208789,0.98315564691574,1.63323337003915,1.47401180774122,0.826606249406124,0,0,0,0,1.85169725349473,0.625592599359821,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0.340296549480063,0.179389635688862,0,0.211931901159562,0.300091096084402,0.515262646192195,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0,0.323292113637624,0.355009592516614,0.302256294682921,0.508681776931463,0.193260853163297,0,0.573609190778008,6.70855383712775,7.81925633096763,6.9716365721711,3.21349270547648,4.79409616663694,4.37972830890996,0,1.92972281457866,0,1.85747171212792,0,10.0560780033867,9.27215795429559,11.5685294344071,9.48528165498588,10.4582133164355,9.72809538355496,11.5954925017741,13.1468381633982,15.774633434802,0.738155454624648,0,0,1.47008711385542,5.07020139287323,3.9313088667105,4.13552934676983,6.18048339180511,0.245976877086227,4.80389868835872,1.53650399572076,0,1.50793458617446,1.574003567695,0.651616610620649,0,2.88662684050547,1.73895607462615,1.40890433082986,0,0.462985512576611,0.951270761172991,0,0,1.23108503043699,0.702012795417713,1.33768046059855,0,1.6798212819886,0.567100388969546,0.895585227028483,0.871901815541886,0,41.8763752211552,2.3773077183571,1.03664057770386,2.45003920808834,1.38866676769018,1.39695367442772,0.381988425558278,0,0,1.33675740514321,2.40274446275134,2.85826432630578,0.897048674762886,0,2.12681028880755,0.517086863031111,0,2.535908257668,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0.65147236858747,0,3.95975936466715,3.01439377059586,0.871533458600294,2.7992437530976,0,1.00451418286425,4.21667878966063,0.239624855491583,0,1.42636905040718,0.144781306667579,1.02738161275192,0.895304816199478,0.112085143993527,0.197030760201927,0.646882724578552,0.77005821767849,4.31960861178188,6.50699269288109,3.86644406388848,2.01019518401218,0.637938751653163,0.749007023947182,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0.207970861530807,0.178428988797162,0,0,0,0,0,1.32845119707087,0.184369168541703,0.955719759148911,0,0,1.03384013061444,0.431428401637234,0.320182673410333,0,0,0.30239029332968,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.532685175939381,0.410635780069046,0.519254429183621,0.464841513839837,0.846016147141356,0.601519410909855,0.736647911487171,0.114814448164607,0,0,0,1.77135275340154,0,0,2.63879072232189,0,0.170093705276516,1.29549549661284,0,0.541892875087706,0,0.509752546090077,0.831076008928724,0.447749509444357,18.4178296382585,16.4704334145687,3.33385162651306,0.328014645699706,0.650756789328606,4.01859945426117,9.065377017016,10.808744489597,0.574265537996172,0,0,0.483353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| |||
|short_description=p2@HMGN5 | |||
}} |
Revision as of 06:12, 23 January 2014
Short description: | p2@HMGN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMGN5_5end |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | 1bp_to_ENST00000430960_5end |
EntrezGene: | HMGN5 |
HGNC: | 8013 |
UniProt: | Q5JSL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.47e-08 | 41 |
forebrain | 1.47e-08 | 41 |
anterior neural tube | 1.47e-08 | 41 |
future forebrain | 1.47e-08 | 41 |
neural tube | 1.70e-08 | 56 |
neural rod | 1.70e-08 | 56 |
future spinal cord | 1.70e-08 | 56 |
neural keel | 1.70e-08 | 56 |
central nervous system | 4.14e-08 | 81 |
regional part of nervous system | 4.90e-08 | 53 |
regional part of brain | 4.90e-08 | 53 |
larynx | 6.02e-08 | 9 |
organ system subdivision | 2.85e-07 | 223 |
nervous system | 3.22e-07 | 89 |
adult organism | 3.30e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.30e-19 | 51 |
immune system cancer | 5.30e-19 | 51 |
leukemia | 5.18e-17 | 39 |
cancer | 3.38e-14 | 235 |
disease of cellular proliferation | 8.66e-14 | 239 |
myeloid leukemia | 2.00e-13 | 31 |
organ system cancer | 9.00e-12 | 137 |