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FF:11786-124B4: Difference between revisions

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|def=
|def=
|expression_enrichment_score=chr3:63953435..63953499,+!p1@ATXN7!1.96!89.29!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.93!83.93!TCF7;;chr10:35484053..35484076,+!p1@CREM!1.85!167.08!CREM;;chr1:25256756..25256774,-!p1@RUNX3!1.82!118.03!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!1.80!83.93!STAT4;;chr2:231090433..231090469,+!p1@SP140!1.74!54.42!SP140;;chr4:109087445..109087463,-!p1@LEF1!1.74!53.65!LEF1;;chr7:50343634..50343717,+!p2@IKZF1!1.72!51.73!IKZF1;;chr19:16435625..16435682,+!p1@KLF2!1.70!1479.23!KLF2;;chrY:21906594..21906622,-!p1@KDM5D!1.70!48.67!KDM5D;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1176.49!TSC22D3;;chr9:3525727..3525828,-!p2@RFX3!1.65!108.45!RFX3;;chr3:71542615..71542644,-!p12@FOXP1!1.64!42.54!FOXP1;;chr10:35416142..35416169,+!p3@CREM!1.63!108.07!CREM;;chr5:133450365..133450444,+!p1@TCF7!1.61!175.13!TCF7;;chr19:54058073..54058088,+!p1@ZNF331!1.60!38.71!ZNF331;;chr2:157189180..157189290,-!p1@NR4A2!1.53!164.02!NR4A2;;chr14:75745523..75745537,+!p1@FOS!1.52!3598.82!FOS;;chr2:192015750..192015793,-!p2@STAT4!1.52!42.54!STAT4;;chr15:60884706..60884743,-!p1@RORA!1.51!155.20!RORA;;chr20:50159198..50159299,-!p1@NFATC2!1.51!45.22!NFATC2;;chr19:45971246..45971265,+!p1@FOSB!1.50!544.94!FOSB;;chr17:37934365..37934387,-!p2@IKZF3!1.49!29.89!IKZF3;;chr17:38497662..38497713,+!p4@RARA!1.48!33.72!RARA;;chr9:117150254..117150271,-!p1@AKNA!1.47!75.88!AKNA;;chr6:91006518..91006570,-!p1@BACH2!1.45!61.70!BACH2;;chr2:97202991..97203043,+!p3@ARID5A!1.44!26.44!ARID5A;;chr9:102584262..102584276,+!p1@NR4A3!1.41!54.03!NR4A3;;chr17:45810594..45810608,+!p1@TBX21!1.41!24.91!TBX21;;chr3:27763807..27763822,-!p1@EOMES!1.41!24.91!EOMES;;chr19:54041669..54041697,+!p2@ZNF331!1.41!24.53!ZNF331;;chr14:75988771..75988826,+!p1@BATF!1.40!31.81!BATF;;chr12:72056800..72056834,+!p1@THAP2!1.39!31.42!THAP2;;chr3:71542684..71542720,-!p18@FOXP1!1.37!22.23!FOXP1;;chr7:50343895..50343936,+!p5@IKZF1!1.35!21.46!IKZF1;;chr5:133451347..133451358,+!p3@TCF7!1.34!21.08!TCF7;;chr19:19779619..19779670,+!p1@ZNF101!1.33!56.33!ZNF101;;chr6:106546808..106546833,+!p3@PRDM1!1.33!25.68!PRDM1;;chr8:123793988..123794016,+!p1@ZHX2!1.32!34.87!ZHX2;;chr7:50344251..50344288,+!p3@IKZF1!1.32!19.93!IKZF1;;chr10:35484090..35484104,+!p6@CREM!1.31!19.54!CREM;;chr19:54040550..54040594,+!p20@ZNF331!1.31!19.54!ZNF331;;chr2:208394817..208394834,+!p3@CREB1!1.29!73.20!CREB1;;chr3:71542651..71542683,-!p22@FOXP1!1.29!18.39!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.28!18.01!LEF1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3698.08!JUNB;;chr19:19729477..19729542,-!p1@PBX4!1.24!34.49!PBX4;;chr10:8096772..8096787,+!p2@GATA3!1.24!19.54!GATA3;;chr13:74707894..74707947,-!p6@KLF12!1.24!18.01!KLF12;;chr11:128392273..128392308,-!p2@ETS1!1.23!67.45!ETS1;;chr21:36421535..36421610,-!p2@RUNX1!1.23!56.33!RUNX1;;chr18:46475696..46475713,-!p1@SMAD7!1.23!18.01!SMAD7;;chr3:71355163..71355209,-!p5@FOXP1!1.22!21.46!FOXP1;;chr2:231090471..231090504,+!p2@SP140!1.22!15.71!SP140;;chr7:50344289..50344323,+!p1@IKZF1!1.22!15.71!IKZF1;;chr3:18486354..18486377,-!p2@SATB1!1.20!18.78!SATB1;;chr5:142814241..142814278,-!p12@NR3C1!1.20!14.95!NR3C1;;chr14:64971288..64971316,-!p2@ZBTB25!1.19!44.45!ZBTB25;;chr8:60031619..60031676,-!p1@TOX!1.19!31.04!TOX;;chr16:79634624..79634642,-!p1@MAF!1.18!54.80!MAF;;chr8:81397846..81397860,+!p3@ZBTB10!1.18!17.63!ZBTB10;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.18!IKZF3;;chr13:41593425..41593480,-!p1@ELF1!1.17!86.61!ELF1;;chr20:51588873..51588953,+!p1@TSHZ2!1.17!18.39!TSHZ2;;chr10:3824332..3824425,-!p4@KLF6!1.16!21.84!KLF6;;chr11:128392085..128392232,-!p1@ETS1!1.14!428.82!ETS1;;chr6:391743..391759,+!p1@IRF4!1.14!12.65!IRF4;;chr16:3313791..3313834,+!p2@ZNF263!1.13!27.59!ZNF263;;chr14:64970670..64970712,-!p3@ZBTB25!1.12!26.44!ZBTB25;;chr10:35416223..35416234,+!p12@CREM!1.12!12.26!CREM;;chr8:67525443..67525459,-!p2@MYBL1!1.11!17.63!MYBL1;;chr7:137620650..137620677,-!p3@CREB3L2!1.11!11.88!CREB3L2;;chr3:23986824..23986848,+!p2@NR1D2!1.10!64.76!NR1D2;;chr6:91006575..91006602,-!p2@BACH2!1.10!17.24!BACH2;;chr10:35416172..35416184,+!p13@CREM!1.10!11.50!CREM;;chr4:57522674..57522699,-!p5@HOPX!1.10!11.50!HOPX;;chr19:54041645..54041661,+!p5@ZNF331!1.10!11.50!ZNF331;;chr3:39195075..39195088,-!p1@CSRNP1!1.09!71.66!CSRNP1;;chr2:97202480..97202499,+!p1@ARID5A!1.08!112.67!ARID5A;;chr2:192015677..192015691,-!p3@STAT4!1.08!11.11!STAT4;;chr14:75988831..75988847,+!p2@BATF!1.08!11.11!BATF;;chr20:51589835..51589848,+!p5@TSHZ2!1.08!11.11!TSHZ2;;chr12:72056773..72056796,+!p3@THAP2!1.07!14.18!THAP2;;chr6:12009042..12009092,+!p6@HIVEP1!1.06!13.80!HIVEP1;;chr4:38665769..38665801,+!p2@KLF3!1.05!93.89!KLF3;;chr4:57522598..57522664,-!p3@HOPX!1.05!10.35!HOPX;;chr6:106546834..106546850,+!p4@PRDM1!1.05!10.35!PRDM1;;chr19:45972701..45972774,+!p2@FOSB!1.04!13.80!FOSB;;chr8:81397820..81397836,+!p2@ZBTB10!1.04!12.65!ZBTB10;;chr10:35416125..35416138,+!p10@CREM!1.04!11.88!CREM;;chr3:71179699..71179744,-!p2@FOXP1!1.02!72.43!FOXP1;;chr1:45805693..45805718,+!p3@TOE1!1.02!20.69!TOE1;;chr17:37934204..37934241,-!p3@IKZF3!1.02!9.58!IKZF3;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.01!53.65!ZNF10;;chr19:12721790..12721810,+!p2@ZNF791!1.01!26.06!ZNF791;;chrX:106960221..106960236,-!p3@TSC22D3!1.01!26.06!TSC22D3;;chr17:38497715..38497734,+!p8@RARA!1.01!9.20!RARA;;chr7:50348268..50348366,+!p4@IKZF1!1.01!9.20!IKZF1;;chr21:36421147..36421193,-!p10@RUNX1!1.01!9.20!RUNX1;;chr11:67007548..67007610,+!p3@KDM2A!1.00!68.21!KDM2A;;chr6:15249128..15249177,+!p4@JARID2!1.00!16.48!JARID2;;chr4:57522166..57522260,-!p2@HOPX!1.00!10.35!HOPX;;chr9:102584241..102584261,+!p4@NR4A3!0.99!13.80!NR4A3;;chr17:37934280..37934299,-!p6@IKZF3!0.99!8.81!IKZF3;;chr14:75746722..75746777,+!p2@FOS!0.98!11.11!FOS;;chr4:109088940..109089037,-!p4@LEF1!0.97!8.43!LEF1;;chr10:35485013..35485034,+!p15@CREM!0.97!8.43!CREM;;chr2:208031542..208031595,-!p2@KLF7!0.96!58.63!KLF7;;chr19:52674696..52674758,-!p1@ZNF836!0.96!24.91!ZNF836;;chr20:56195474..56195506,-!p1@ZBP1!0.96!8.05!ZBP1;;chr21:36421347..36421380,-!p8@RUNX1!0.96!8.05!RUNX1;;chr17:38020516..38020544,-!p5@IKZF3!0.96!8.05!IKZF3;;chr10:104154246..104154347,+!p3@NFKB2!0.95!50.20!NFKB2;;chrX:101186981..101187030,-!p1@ZMAT1!0.95!26.44!ZMAT1;;chr15:60884747..60884774,-!p3@RORA!0.95!19.93!RORA;;chr11:128563948..128564003,+!p1@FLI1!0.94!95.42!FLI1;;chr8:60031563..60031574,-!p7@TOX!0.94!7.66!TOX;;chr2:68592406..68592424,+!p1@PLEK!0.94!7.66!PLEK;;chr3:63898321..63898396,+!p3@ATXN7!0.93!17.63!ATXN7;;chr10:8096631..8096660,+!p1@GATA3!0.93!9.20!GATA3;;chr2:68592394..68592405,+!p2@PLEK!0.92!7.28!PLEK;;chr4:109089901..109089930,-!p3@LEF1!0.92!7.28!LEF1;;chr6:106546731..106546755,+!p5@PRDM1!0.92!7.28!PRDM1;;chrY:2803415..2803468,+!p1@ZFY!0.92!7.28!ZFY;;chr6:143266297..143266356,-!p1@HIVEP2!0.91!36.02!HIVEP2;;chr6:106546786..106546802,+!p6@PRDM1!0.90!6.90!PRDM1;;chr17:56565257..56565283,-!p2@HSF5!0.90!6.90!HSF5;;chr20:56195525..56195556,-!p2@ZBP1!0.90!6.90!ZBP1;;chr13:41240717..41240735,-!p2@FOXO1!0.89!47.90!FOXO1;;chr16:79633894..79633954,-!p3@MAF!0.89!13.41!MAF;;chr11:67007611..67007622,+!p6@KDM2A!0.89!9.20!KDM2A;;chr8:81397876..81397898,+!p5@ZBTB10!0.89!8.05!ZBTB10;;chr19:18392422..18392440,-!p1@JUND!0.88!948.85!JUND;;chr2:43453734..43453751,-!p1@ZFP36L2!0.88!744.98!ZFP36L2;;chr7:77428066..77428132,+!p2@PHTF2!0.88!45.22!PHTF2;;chr11:85375237..85375277,-!p4@CREBZF!0.88!7.66!CREBZF;;chr11:128392265..128392267,-!p10@ETS1!0.88!6.51!ETS1;;chr19:12444440..12444455,-!p1@ZNF563!0.87!11.50!ZNF563;;chrX:106960249..106960260,-!p5@TSC22D3!0.87!10.35!TSC22D3;;chr4:38665810..38665827,+!p1@KLF3!0.86!96.57!KLF3;;chr7:21467674..21467727,+!p1@SP4!0.86!26.06!SP4;;chr14:65569101..65569119,-!p3@MAX!0.86!20.69!MAX;;chr7:99097863..99097936,-!p1@ZNF394!0.85!64.76!ZNF394;;chr4:185395633..185395651,-!p2@IRF2!0.85!9.96!IRF2;;chr2:100759037..100759058,-!p2@AFF3!0.85!6.13!AFF3;;chr3:71179687..71179696,-!p54@FOXP1!0.85!6.13!FOXP1;;chr3:71542747..71542766,-!p34@FOXP1!0.85!6.13!FOXP1;;chr14:64971893..64971928,-!p8@ZBTB25!0.85!6.13!ZBTB25;;chr20:52226313..52226350,-!p3@ZNF217!0.85!6.13!ZNF217;;chrX:106960180..106960197,-!p2@TSC22D3!0.84!23.76!TSC22D3;;chr17:36861675..36861697,+!p3@MLLT6!0.84!14.56!MLLT6;;chr2:157199008..157199023,-!p3@NR4A2!0.84!13.03!NR4A2;;chr19:16435523..16435619,+!p2@KLF2!0.84!8.43!KLF2;;chr2:61108695..61108753,+!p1@REL!0.83!42.15!REL;;chr13:74708246..74708264,-!p8@KLF12!0.83!6.51!KLF12;;chr7:50344144..50344157,+!p6@IKZF1!0.83!5.75!IKZF1;;chr19:54041574..54041589,+!p6@ZNF331!0.83!5.75!ZNF331;;chr10:3827389..3827408,-!p1@KLF6!0.82!466.00!KLF6;;chr5:131826457..131826514,-!p1@IRF1!0.82!239.51!IRF1;;chr12:57914286..57914304,-!p1@DDIT3!0.82!221.12!DDIT3;;chr10:3827417..3827428,-!p3@KLF6!0.82!51.73!KLF6;;chr16:68119324..68119364,+!p1@NFATC3!0.82!26.83!NFATC3;;chr6:45390269..45390298,+!p5@RUNX2!0.82!9.58!RUNX2;;chr4:103422499..103422632,+!p1@NFKB1!0.81!123.01!NFKB1;;chr18:77155922..77155939,+!p1@NFATC1!0.81!15.71!NFATC1;;chr16:79634595..79634620,-!p2@MAF!0.81!10.35!MAF;;chr5:142782823..142782854,-!p3@NR3C1!0.81!8.05!NR3C1;;chr16:88752889..88752921,-!p1@SNAI3!0.81!6.51!SNAI3;;chr9:117150303..117150312,-!p3@AKNA!0.80!6.90!AKNA;;chr8:41909982..41910009,-!p2@KAT6A!0.80!6.13!KAT6A;;chr19:54041603..54041615,+!p10@ZNF331!0.80!5.37!ZNF331;;chr2:100759010..100759035,-!p1@AFF3!0.80!5.37!AFF3;;chr4:109089573..109089585,-!p8@LEF1!0.80!5.37!LEF1;;chr9:3526360..3526421,-!p5@RFX3!0.79!9.96!RFX3;;chr11:67007522..67007533,+!p5@KDM2A!0.79!9.20!KDM2A;;chr17:36861735..36861755,+!p4@MLLT6!0.79!9.20!MLLT6;;chr9:32550965..32551031,-!p4@TOPORS!0.79!8.43!TOPORS;;chr19:19779686..19779697,+!p3@ZNF101!0.79!6.13!ZNF101;;chr11:67007477..67007493,+!p2@KDM2A!0.78!46.37!KDM2A;;chr19:9546177..9546224,-!p1@ZNF266!0.78!39.47!ZNF266;;chr9:3525867..3525902,-!p3@RFX3!0.78!18.78!RFX3;;chr19:22235279..22235301,+!p1@ZNF257!0.78!9.96!ZNF257;;chr14:99737850..99737852,-!p3@BCL11B!0.78!4.98!BCL11B;;chr16:89789271..89789291,+!p5@ZNF276!0.78!4.98!ZNF276;;chr5:142814316..142814335,-!p18@NR3C1!0.78!4.98!NR3C1;;chr6:152011654..152011682,+!p1@ESR1!0.78!4.98!ESR1;;chr6:91006503..91006517,-!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331630,+!p2@ZNF141!0.30!1.92!ZNF141;;chr9:86593238..86593252,-!p3@HNRNPK!0.30!1.92!HNRPK;;chr11:67007535..67007546,+!p7@KDM2A!0.30!1.92!KDM2A;;chr19:9649253..9649265,-!p3@ZNF426!0.30!1.53!ZNF426;;chr1:211432872..211432883,+!p7@RCOR3!0.30!1.53!RCOR3;;chr15:31619200..31619211,+!p12@KLF13!0.30!1.15!KLF13;;chr6:44355478..44355489,+!p5@CDC5L!0.30!1.15!CDC5L;;chr17:38474489..38474548,+!p1@RARA!0.29!55.18!RARA;;chr12:69753448..69753577,+!p1@YEATS4!0.29!34.87!YEATS4;;chr3:169491171..169491205,+!p1@MYNN!0.29!30.27!MYNN;;chr10:38299546..38299686,+!p1@ZNF33A!0.29!25.29!ZNF33A;;chr19:36705998..36706021,+!p2@ZNF146!0.29!24.91!ZNF146;;chr4:76439665..76439699,+!p1@THAP6!0.29!24.14!THAP6;;chr18:48494379..48494426,+!p1@ELAC1,p2@SMAD4!0.29!19.16!SMAD4;;chr14:100705200..100705237,+!p3@YY1!0.29!13.03!YY1;;chr16:89284104..89284150,+!p1@ZNF778!0.29!11.88!ZNF778;;chr19:45504688..45504782,+!p1@RELB!0.29!9.96!RELB;;chr19:21106049..21106072,+!p1@ZNF85!0.29!9.20!ZNF85;;chr19:11959532..11959593,+!p1@ZNF439!0.29!6.13!ZNF439;;chr19:56135928..56135936,-!p1@ZNF784!0.29!6.13!ZNF784;;chr1:173837488..173837526,+!p1@ZBTB37!0.29!5.37!ZBTB37;;chr9:2015306..2015323,+!p3@SMARCA2!0.29!3.83!SMARCA2;;chr19:58326246..58326262,-!p2@ZNF552!0.29!3.45!ZNF552;;chr19:19932586..19932598,-!p2@ZNF506!0.29!2.68!ZNF506;;chr19:36909484..36909525,-!p2@ZFP82!0.29!2.68!ZFP82;;chr14:35873101..35873119,-!p6@NFKBIA!0.29!1.53!NFKBIA;;chr6:35227247..35227280,+!p3@ZNF76!0.29!1.53!ZNF76;;chr6:44355499..44355514,+!p3@CDC5L!0.29!1.15!CDC5L;;chr16:88519743..88519754,+!p2@ZFPM1!0.29!1.15!ZFPM1;;chr4:144434814..144434932,+!p1@SMARCA5!0.28!86.61!SMARCA5;;chr19:39390587..39390646,+!p1@NFKBIB!0.28!26.83!NFKBIB;;chr3:129158715..129158766,-!p2@MBD4!0.28!16.10!MBD4;;chr1:167190091..167190156,+!p1@POU2F1!0.28!13.03!POU2F1;;chr13:37393351..37393423,+!p1@RFXAP!0.28!12.26!RFXAP;;chr14:102786063..102786112,+!p1@ZNF839!0.28!11.88!ZNF839;;chr17:47439568..47439641,-!p2@ZNF652!0.28!9.20!ZNF652;;chr19:37157713..37157760,-!p1@ZNF461!0.28!9.20!ZNF461;;chr19:58326267..58326292,-!p1@ZNF552!0.28!5.37!ZNF552;;chr1:40997285..40997352,+!p1@ZNF684!0.28!5.37!ZNF684;;chr6:157099198..157099221,+!p3@ARID1B!0.28!4.98!ARID1B;;chr2:148778570..148778589,+!p4@MBD5!0.28!4.60!MBD5;;chr19:54041382..54041437,+!p3@ZNF331!0.28!4.22!ZNF331;;chr5:178450797..178450814,+!p1@ZNF879!0.28!3.83!ZNF879;;chr19:37958318..37958365,-!p2@ZNF569!0.28!3.83!ZNF569;;chr19:58071166..58071189,-!p2@ZNF550!0.28!3.45!ZNF550;;chr4:87928307..87928321,+!p8@AFF1!0.28!3.07!AFF1;;chr14:64970427..64970457,+!p3@ZBTB1!0.28!2.68!ZBTB1;;chr17:2304226..2304239,-!p3@MNT!0.28!2.68!MNT;;chr16:29817399..29817425,+!p13@MAZ!0.28!2.30!MAZ;;chr14:24584138..24584192,-!p2@NRL!0.28!1.92!NRL;;chr7:64023410..64023428,-!p2@ZNF680!0.28!1.92!ZNF680;;chr8:128747757..128747800,+!p7@MYC!0.28!1.53!MYC;;chr16:89787436..89787450,+!p4@ZNF276!0.28!1.53!ZNF276;;chr1:38325227..38325246,-!p2@MTF1!0.28!1.53!MTF1;;chr1:45805788..45805801,+!p6@TOE1!0.28!1.53!TOE1;;chr22:21356345..21356367,-!p3@THAP7!0.28!1.53!THAP7;;chrX:131624056..131624069,-!p2@MBNL3!0.28!1.53!MBNL3;;chr22:21355865..21355886,-!p5@THAP7!0.28!1.15!THAP7;;chr13:20357063..20357105,-!p1@PSPC1!0.27!54.80!PSPC1;;chr6:56954919..56955000,+!p1@ZNF451!0.27!33.34!ZNF451;;chr12:11802600..11802685,+!p1@ETV6!0.27!25.29!ETV6;;chr17:36861496..36861586,+!p1@MLLT6!0.27!15.71!MLLT6;;chr1:6640046..6640101,+!p1@ZBTB48!0.27!12.65!ZBTB48;;chr12:96588219..96588263,+!p2@ELK3!0.27!11.50!ELK3;;chr19:57999101..57999158,+!p1@ZNF419!0.27!10.73!ZNF419;;chr19:18392274..18392286,-!p3@JUND!0.27!10.35!JUND;;chr19:58361185..58361235,+!p2@ZNF587!0.27!8.43!ZNF587;;chr7:149194843..149194922,-!p2@ZNF746!0.27!8.05!ZNF746;;chr3:129158854..129158883,-!p3@MBD4!0.27!7.66!MBD4;;chrX:129244840..129244881,-!p2@ELF4!0.27!5.75!ELF4;;chr19:12721760..12721778,+!p3@ZNF791!0.27!4.98!ZNF791;;chr7:17338324..17338341,+!p3@AHR!0.27!4.98!AHR;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790,CL:0002425,CL:0002427
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790,CL:0002425,CL:0002427
|fonse_cell_line=
|fonse_cell_line=

Revision as of 15:39, 15 May 2017

Name:CD4+CD25-CD45RA- memory conventional T cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13239
Sample type:primary cells
Genomic View: UCSC
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age25
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number4
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005369
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13239 CAGE DRX008062 DRR008934
Accession ID Hg19

Library idBAMCTSS
CNhs13239 DRZ000359 DRZ001744
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.566
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.165
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.221
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.247
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.566
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.219
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.518
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.787
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.397
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.829
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.327
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.256
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.368
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.717
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.853
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.465
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.209
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.432
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.247
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.247
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.903
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.141
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.37
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.829
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.844
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.564
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.72
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.992
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.332
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.898
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.411
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.247
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.332
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13239

Jaspar motifP-value
MA0002.23.34367e-7
MA0003.10.633
MA0004.10.87
MA0006.10.0806
MA0007.10.741
MA0009.10.0858
MA0014.10.643
MA0017.10.784
MA0018.23.66639e-10
MA0019.10.275
MA0024.10.647
MA0025.10.0274
MA0027.10.551
MA0028.11.37653e-5
MA0029.10.363
MA0030.11.77628e-4
MA0031.16.72121e-6
MA0035.20.121
MA0038.10.315
MA0039.20.729
MA0040.10.593
MA0041.10.843
MA0042.10.622
MA0043.10.00151
MA0046.10.363
MA0047.20.0258
MA0048.10.784
MA0050.13.04223e-7
MA0051.10.00293
MA0052.10.0262
MA0055.10.767
MA0057.10.389
MA0058.10.638
MA0059.10.7
MA0060.10.883
MA0061.17.51223e-5
MA0062.27.48837e-21
MA0065.20.593
MA0066.10.385
MA0067.10.00163
MA0068.10.732
MA0069.10.781
MA0070.10.872
MA0071.10.904
MA0072.10.00573
MA0073.10.874
MA0074.10.483
MA0076.19.61873e-8
MA0077.10.0244
MA0078.10.661
MA0079.20.703
MA0080.23.43991e-12
MA0081.10.00591
MA0083.10.166
MA0084.10.44
MA0087.10.406
MA0088.10.526
MA0090.11.38726e-4
MA0091.10.36
MA0092.10.759
MA0093.10.92
MA0099.20.0766
MA0100.10.75
MA0101.10.0275
MA0102.20.967
MA0103.10.643
MA0104.20.061
MA0105.14.5702e-6
MA0106.10.0312
MA0107.10.057
MA0108.23.76511e-4
MA0111.10.658
MA0112.20.538
MA0113.10.833
MA0114.10.74
MA0115.10.427
MA0116.10.00467
MA0117.10.0123
MA0119.10.101
MA0122.10.456
MA0124.10.214
MA0125.10.186
MA0131.10.098
MA0135.10.764
MA0136.15.78667e-25
MA0137.20.764
MA0138.20.132
MA0139.10.108
MA0140.10.0975
MA0141.10.334
MA0142.10.348
MA0143.10.451
MA0144.10.812
MA0145.10.0441
MA0146.10.728
MA0147.10.101
MA0148.10.117
MA0149.10.294
MA0150.10.579
MA0152.10.00934
MA0153.10.349
MA0154.10.242
MA0155.10.263
MA0156.12.30843e-23
MA0157.11.447e-4
MA0159.10.489
MA0160.10.9
MA0162.10.383
MA0163.12.77839e-4
MA0164.10.84
MA0258.10.82
MA0259.10.187



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13239

Novel motifP-value
10.713
100.0255
1000.96
1010.439
1020.904
1030.543
1040.656
1050.159
1060.733
1070.00202
1080.468
1090.211
110.447
1100.969
1110.549
1120.931
1130.381
1140.923
1150.391
1160.0868
1170.00282
1180.488
1190.169
120.593
1200.726
1210.821
1220.577
1230.0844
1240.691
1250.537
1260.405
1270.977
1280.57
1290.884
130.715
1300.626
1310.524
1320.228
1330.713
1340.747
1350.943
1360.9
1370.0375
1380.752
1390.159
140.68
1400.315
1410.887
1420.626
1430.00125
1440.79
1450.467
1460.86
1470.0152
1480.295
1490.532
150.253
1500.81
1510.608
1520.557
1530.926
1540.518
1550.0245
1560.588
1570.217
1580.02
1590.233
160.479
1600.12
1610.563
1620.0138
1630.388
1640.18
1650.644
1660.294
1670.346
1680.471
1690.145
170.707
180.89
190.032
20.308
200.286
210.843
220.348
230.54
240.7
250.105
260.989
270.67
280.531
290.0316
30.435
300.154
310.723
320.0282
330.191
340.396
350.302
360.0355
370.257
380.712
390.194
40.557
400.798
410.105
420.192
430.645
440.882
450.266
460.703
470.389
480.61
490.277
50.475
500.415
510.808
520.385
530.616
540.995
550.963
560.799
570.901
580.155
590.5
60.642
600.707
610.15
620.205
630.734
640.741
650.654
660.733
670.681
680.74
690.805
70.477
700.191
710.108
720.152
730.509
740.986
750.026
760.174
770.00821
780.575
790.472
80.415
800.00163
810.815
820.347
830.461
840.585
850.629
860.0737
870.845
880.892
890.0342
90.985
900.159
910.998
920.939
930.513
940.28
950.00457
960.594
970.455
980.346
993.7156e-6



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13239


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)
0000898 (naive T cell)
0000895 (naive thymus-derived CD4-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011122 (human CD4-positiveCD25-CD45RA- naive conventional T cells sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
CL:0002425 (early T lineage precursor)
CL:0002427 (resting double-positive thymocyte)

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