FFCP PHASE1:Mm9::chr4:147412878..147412925,-: Difference between revisions
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|id=chr4:147412878..147412925,- | |id=chr4:147412878..147412925,- | ||
|ontology_enrichment_celltype=CL:0000221!4.35e-20!44;CL:0000133!4.35e-20!44;CL:0002319!1.48e-19!43;CL:0000540!1.40e-18!33;CL:0000047!1.40e-18!33;CL:0000031!1.40e-18!33;CL:0000404!1.40e-18!33;CL:0000117!4.33e-15!23;CL:0000337!4.33e-15!23;CL:0000055!3.22e-14!50;CL:0000393!1.73e-13!39;CL:0000211!1.73e-13!39 | |ontology_enrichment_celltype=CL:0000221!4.35e-20!44;CL:0000133!4.35e-20!44;CL:0002319!1.48e-19!43;CL:0000540!1.40e-18!33;CL:0000047!1.40e-18!33;CL:0000031!1.40e-18!33;CL:0000404!1.40e-18!33;CL:0000117!4.33e-15!23;CL:0000337!4.33e-15!23;CL:0000055!3.22e-14!50;CL:0000393!1.73e-13!39;CL:0000211!1.73e-13!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.25e-20,44;CL:0000133,4.25e-20,44;CL:0002319,1.45e-19,43;CL:0000540,1.37e-18,33;CL:0000047,1.37e-18,33;CL:0000031,1.37e-18,33;CL:0000404,1.37e-18,33;CL:0000117,4.26e-15,23;CL:0000337,4.26e-15,23;CL:0000393,1.70e-13,39;CL:0000211,1.70e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.14e-31!75;UBERON:0001016!2.14e-31!75;UBERON:0001017!3.80e-30!73;UBERON:0005743!3.80e-30!73;UBERON:0004121!9.94e-27!102;UBERON:0000924!9.94e-27!102;UBERON:0006601!9.94e-27!102;UBERON:0002346!1.39e-21!71;UBERON:0003075!1.39e-21!71;UBERON:0007284!1.39e-21!71;UBERON:0000033!4.11e-21!63;UBERON:0001049!7.19e-21!52;UBERON:0005068!7.19e-21!52;UBERON:0006241!7.19e-21!52;UBERON:0007135!7.19e-21!52;UBERON:0000955!2.09e-19!50;UBERON:0006238!2.09e-19!50;UBERON:0002616!5.35e-19!49;UBERON:0007811!3.17e-18!86;UBERON:0000153!4.05e-18!94;UBERON:0003056!1.35e-16!49;UBERON:0002020!2.25e-15!34;UBERON:0003080!3.09e-14!40;UBERON:0002780!1.17e-13!39;UBERON:0001890!1.17e-13!39;UBERON:0006240!1.17e-13!39;UBERON:0002791!1.96e-12!29;UBERON:0003528!1.96e-12!29;UBERON:0001893!1.96e-12!29;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!2.14e-31!75;UBERON:0001016!2.14e-31!75;UBERON:0001017!3.80e-30!73;UBERON:0005743!3.80e-30!73;UBERON:0004121!9.94e-27!102;UBERON:0000924!9.94e-27!102;UBERON:0006601!9.94e-27!102;UBERON:0002346!1.39e-21!71;UBERON:0003075!1.39e-21!71;UBERON:0007284!1.39e-21!71;UBERON:0000033!4.11e-21!63;UBERON:0001049!7.19e-21!52;UBERON:0005068!7.19e-21!52;UBERON:0006241!7.19e-21!52;UBERON:0007135!7.19e-21!52;UBERON:0000955!2.09e-19!50;UBERON:0006238!2.09e-19!50;UBERON:0002616!5.35e-19!49;UBERON:0007811!3.17e-18!86;UBERON:0000153!4.05e-18!94;UBERON:0003056!1.35e-16!49;UBERON:0002020!2.25e-15!34;UBERON:0003080!3.09e-14!40;UBERON:0002780!1.17e-13!39;UBERON:0001890!1.17e-13!39;UBERON:0006240!1.17e-13!39;UBERON:0002791!1.96e-12!29;UBERON:0003528!1.96e-12!29;UBERON:0001893!1.96e-12!29;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.05e-31,75;UBERON:0001017,3.66e-30,73;UBERON:0004121,1.73e-29,95;UBERON:0000924,1.73e-29,95;UBERON:0006601,1.73e-29,95;UBERON:0002346,7.46e-25,64;UBERON:0003075,7.46e-25,64;UBERON:0007284,7.46e-25,64;UBERON:0000073,3.76e-22,54;UBERON:0010371,1.26e-21,73;UBERON:0001049,7.01e-21,52;UBERON:0005068,7.01e-21,52;UBERON:0006241,7.01e-21,52;UBERON:0007135,7.01e-21,52;UBERON:0010314,1.44e-19,92;UBERON:0000955,1.64e-17,47;UBERON:0006238,1.64e-17,47;UBERON:0002616,4.12e-17,46;UBERON:0003056,1.32e-16,49;UBERON:0002020,2.21e-15,34;UBERON:0003080,3.04e-14,40;UBERON:0002780,1.15e-13,39;UBERON:0001890,1.15e-13,39;UBERON:0006240,1.15e-13,39;UBERON:0003528,1.93e-12,29;UBERON:0002791,1.93e-12,29;UBERON:0001893,1.93e-12,29;UBERON:0000956,1.05e-07,21;UBERON:0001869,1.05e-07,21;UBERON:0000203,1.05e-07,21;UBERON:0003076,1.55e-07,12;UBERON:0003057,1.55e-07,12 | |||
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| ||
|short_description=p1@Clcn6 | |short_description=p1@Clcn6 | ||
}} | }} |
Revision as of 14:32, 13 November 2012
Short description: | p1@Clcn6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clcn6_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000030879, ENSMUST00000094479, ENSMUST00000105711_5end |
EntrezGene: | Clcn6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.25e-20 | 44 |
neurectodermal cell | 4.25e-20 | 44 |
neural cell | 1.45e-19 | 43 |
neuron | 1.37e-18 | 33 |
neuronal stem cell | 1.37e-18 | 33 |
neuroblast | 1.37e-18 | 33 |
electrically signaling cell | 1.37e-18 | 33 |
CNS neuron (sensu Vertebrata) | 4.26e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.26e-15 | 23 |
electrically responsive cell | 1.70e-13 | 39 |
electrically active cell | 1.70e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.05e-31 | 75 |
central nervous system | 3.66e-30 | 73 |
ectoderm-derived structure | 1.73e-29 | 95 |
ectoderm | 1.73e-29 | 95 |
presumptive ectoderm | 1.73e-29 | 95 |
neurectoderm | 7.46e-25 | 64 |
neural plate | 7.46e-25 | 64 |
presumptive neural plate | 7.46e-25 | 64 |
regional part of nervous system | 3.76e-22 | 54 |
ecto-epithelium | 1.26e-21 | 73 |
neural tube | 7.01e-21 | 52 |
neural rod | 7.01e-21 | 52 |
future spinal cord | 7.01e-21 | 52 |
neural keel | 7.01e-21 | 52 |
structure with developmental contribution from neural crest | 1.44e-19 | 92 |
brain | 1.64e-17 | 47 |
future brain | 1.64e-17 | 47 |
regional part of brain | 4.12e-17 | 46 |
pre-chordal neural plate | 1.32e-16 | 49 |
gray matter | 2.21e-15 | 34 |
anterior neural tube | 3.04e-14 | 40 |
regional part of forebrain | 1.15e-13 | 39 |
forebrain | 1.15e-13 | 39 |
future forebrain | 1.15e-13 | 39 |
brain grey matter | 1.93e-12 | 29 |
regional part of telencephalon | 1.93e-12 | 29 |
telencephalon | 1.93e-12 | 29 |
cerebral cortex | 1.05e-07 | 21 |
cerebral hemisphere | 1.05e-07 | 21 |
pallium | 1.05e-07 | 21 |
posterior neural tube | 1.55e-07 | 12 |
chordal neural plate | 1.55e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.