FFCP PHASE1:Mm9::chr19:37250515..37250524,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:37250515..37250524,- | |id=chr19:37250515..37250524,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.10e-08!63;UBERON:0004121!3.57e-08!102;UBERON:0000924!3.57e-08!102;UBERON:0006601!3.57e-08!102;UBERON:0004111!3.92e-08!122;UBERON:0000955!7.56e-08!50;UBERON:0006238!7.56e-08!50;UBERON:0003103!1.59e-07!43;UBERON:0001049!1.91e-07!52;UBERON:0005068!1.91e-07!52;UBERON:0006241!1.91e-07!52;UBERON:0007135!1.91e-07!52;UBERON:0002616!3.24e-07!49;UBERON:0000025!4.30e-07!114;UBERON:0002346!6.35e-07!71;UBERON:0003075!6.35e-07!71;UBERON:0007284!6.35e-07!71;UBERON:0001017!8.78e-07!73;UBERON:0005743!8.78e-07!73;UBERON:0000073!9.43e-07!75;UBERON:0001016!9.43e-07!75 | |ontology_enrichment_uberon=UBERON:0000033!1.10e-08!63;UBERON:0004121!3.57e-08!102;UBERON:0000924!3.57e-08!102;UBERON:0006601!3.57e-08!102;UBERON:0004111!3.92e-08!122;UBERON:0000955!7.56e-08!50;UBERON:0006238!7.56e-08!50;UBERON:0003103!1.59e-07!43;UBERON:0001049!1.91e-07!52;UBERON:0005068!1.91e-07!52;UBERON:0006241!1.91e-07!52;UBERON:0007135!1.91e-07!52;UBERON:0002616!3.24e-07!49;UBERON:0000025!4.30e-07!114;UBERON:0002346!6.35e-07!71;UBERON:0003075!6.35e-07!71;UBERON:0007284!6.35e-07!71;UBERON:0001017!8.78e-07!73;UBERON:0005743!8.78e-07!73;UBERON:0000073!9.43e-07!75;UBERON:0001016!9.43e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.91e-14,10;UBERON:0000411,8.91e-14,10;UBERON:0001950,8.91e-14,10;UBERON:0000955,4.39e-12,47;UBERON:0006238,4.39e-12,47;UBERON:0002616,2.19e-10,46;UBERON:0000073,3.84e-10,54;UBERON:0002346,1.30e-09,64;UBERON:0003075,1.30e-09,64;UBERON:0007284,1.30e-09,64;UBERON:0003056,1.45e-09,49;UBERON:0010314,3.08e-09,92;UBERON:0001049,6.09e-09,52;UBERON:0005068,6.09e-09,52;UBERON:0006241,6.09e-09,52;UBERON:0007135,6.09e-09,52;UBERON:0000956,2.02e-08,21;UBERON:0001869,2.02e-08,21;UBERON:0000203,2.02e-08,21;UBERON:0003080,2.19e-08,40;UBERON:0001017,3.35e-08,73;UBERON:0010371,4.10e-08,73;UBERON:0001016,6.48e-08,75;UBERON:0002619,6.95e-08,17;UBERON:0004121,8.12e-08,95;UBERON:0000924,8.12e-08,95;UBERON:0006601,8.12e-08,95;UBERON:0003528,1.07e-07,29;UBERON:0002791,1.07e-07,29;UBERON:0001893,1.07e-07,29;UBERON:0007023,1.33e-07,51;UBERON:0002780,6.77e-07,39;UBERON:0001890,6.77e-07,39;UBERON:0006240,6.77e-07,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0.510749352340751,1.38245879930619,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0,0,0,0,0,0.376999773989026,0,1.73519228303894,0,0,0.220841518460394,0,0,2.04946557908083,1.25668024088073,0,0,0,0,2.54644086988199,2.28750301409313,0.125654352112864,1.39059456153821,2.55715457330331,1.66230435647648,0.811206315338788,0,0.248813941220186,0,1.05220927943237,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.817357396570186,0.822799249567402,0.492502392237286,1.29710095273369,0.877199924551994,0.658650345873152,1.07365135008297,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.126473074248515,0.885660887877613,0,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.963303539926752,0.586058432961016,0,1.26235463602186,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.24924921495265,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,1.12950368523413,0,1.71868654031819,0.515559547031063,0.685082519770642,3.0215755895588,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0.510749352340751,1.38245879930619,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0,0,0,0,0,0.376999773989026,0,1.73519228303894,0,0,0.220841518460394,0,0,2.04946557908083,1.25668024088073,0,0,0,0,2.54644086988199,2.28750301409313,0.125654352112864,1.39059456153821,2.55715457330331,1.66230435647648,0.811206315338788,0,0.248813941220186,0,1.05220927943237,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.817357396570186,0.822799249567402,0.492502392237286,1.29710095273369,0.877199924551994,0.658650345873152,1.07365135008297,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.126473074248515,0.885660887877613,0,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.963303539926752,0.586058432961016,0,1.26235463602186,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.24924921495265,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,1.12950368523413,0,1.71868654031819,0.515559547031063,0.685082519770642,3.0215755895588,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p10@Cpeb3 | |short_description=p10@Cpeb3 | ||
}} | }} |
Revision as of 21:50, 13 November 2012
Short description: | p10@Cpeb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Cpeb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 21bp_to_ENSMUST00000142973_5end |
EntrezGene: | Cpeb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.91e-14 | 10 |
visual cortex | 8.91e-14 | 10 |
neocortex | 8.91e-14 | 10 |
brain | 4.39e-12 | 47 |
future brain | 4.39e-12 | 47 |
regional part of brain | 2.19e-10 | 46 |
regional part of nervous system | 3.84e-10 | 54 |
neurectoderm | 1.30e-09 | 64 |
neural plate | 1.30e-09 | 64 |
presumptive neural plate | 1.30e-09 | 64 |
pre-chordal neural plate | 1.45e-09 | 49 |
structure with developmental contribution from neural crest | 3.08e-09 | 92 |
neural tube | 6.09e-09 | 52 |
neural rod | 6.09e-09 | 52 |
future spinal cord | 6.09e-09 | 52 |
neural keel | 6.09e-09 | 52 |
cerebral cortex | 2.02e-08 | 21 |
cerebral hemisphere | 2.02e-08 | 21 |
pallium | 2.02e-08 | 21 |
anterior neural tube | 2.19e-08 | 40 |
central nervous system | 3.35e-08 | 73 |
ecto-epithelium | 4.10e-08 | 73 |
nervous system | 6.48e-08 | 75 |
regional part of cerebral cortex | 6.95e-08 | 17 |
ectoderm-derived structure | 8.12e-08 | 95 |
ectoderm | 8.12e-08 | 95 |
presumptive ectoderm | 8.12e-08 | 95 |
brain grey matter | 1.07e-07 | 29 |
regional part of telencephalon | 1.07e-07 | 29 |
telencephalon | 1.07e-07 | 29 |
adult organism | 1.33e-07 | 51 |
regional part of forebrain | 6.77e-07 | 39 |
forebrain | 6.77e-07 | 39 |
future forebrain | 6.77e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.