FFCP PHASE1:Mm9::chr18:60907987..60908064,-: Difference between revisions
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|id=chr18:60907987..60908064,- | |id=chr18:60907987..60908064,- | ||
|ontology_enrichment_celltype=CL:0002319!5.03e-18!43;CL:0000221!7.12e-18!44;CL:0000133!7.12e-18!44;CL:0000540!1.71e-14!33;CL:0000047!1.71e-14!33;CL:0000031!1.71e-14!33;CL:0000404!1.71e-14!33;CL:0000117!1.28e-13!23;CL:0000337!1.28e-13!23;CL:0000055!2.09e-13!50;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39 | |ontology_enrichment_celltype=CL:0002319!5.03e-18!43;CL:0000221!7.12e-18!44;CL:0000133!7.12e-18!44;CL:0000540!1.71e-14!33;CL:0000047!1.71e-14!33;CL:0000031!1.71e-14!33;CL:0000404!1.71e-14!33;CL:0000117!1.28e-13!23;CL:0000337!1.28e-13!23;CL:0000055!2.09e-13!50;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.98e-18,43;CL:0000221,7.05e-18,44;CL:0000133,7.05e-18,44;CL:0000540,1.70e-14,33;CL:0000047,1.70e-14,33;CL:0000031,1.70e-14,33;CL:0000404,1.70e-14,33;CL:0000117,1.27e-13,23;CL:0000337,1.27e-13,23;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.35e-28!73;UBERON:0005743!3.35e-28!73;UBERON:0000073!1.61e-27!75;UBERON:0001016!1.61e-27!75;UBERON:0004121!1.22e-25!102;UBERON:0000924!1.22e-25!102;UBERON:0006601!1.22e-25!102;UBERON:0002346!1.32e-19!71;UBERON:0003075!1.32e-19!71;UBERON:0007284!1.32e-19!71;UBERON:0001049!2.69e-19!52;UBERON:0005068!2.69e-19!52;UBERON:0006241!2.69e-19!52;UBERON:0007135!2.69e-19!52;UBERON:0000955!1.45e-18!50;UBERON:0006238!1.45e-18!50;UBERON:0002616!5.03e-18!49;UBERON:0000033!6.04e-17!63;UBERON:0002020!2.82e-15!34;UBERON:0003080!6.49e-15!40;UBERON:0002780!2.34e-14!39;UBERON:0001890!2.34e-14!39;UBERON:0006240!2.34e-14!39;UBERON:0003056!5.82e-14!49;UBERON:0002791!4.89e-12!29;UBERON:0003528!4.89e-12!29;UBERON:0001893!4.89e-12!29;UBERON:0000153!3.53e-10!94;UBERON:0000468!2.92e-09!333;UBERON:0000025!8.43e-09!114;UBERON:0007811!8.87e-09!86;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0004111!2.69e-08!122;UBERON:0000479!3.22e-07!349;UBERON:0000922!8.82e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!3.35e-28!73;UBERON:0005743!3.35e-28!73;UBERON:0000073!1.61e-27!75;UBERON:0001016!1.61e-27!75;UBERON:0004121!1.22e-25!102;UBERON:0000924!1.22e-25!102;UBERON:0006601!1.22e-25!102;UBERON:0002346!1.32e-19!71;UBERON:0003075!1.32e-19!71;UBERON:0007284!1.32e-19!71;UBERON:0001049!2.69e-19!52;UBERON:0005068!2.69e-19!52;UBERON:0006241!2.69e-19!52;UBERON:0007135!2.69e-19!52;UBERON:0000955!1.45e-18!50;UBERON:0006238!1.45e-18!50;UBERON:0002616!5.03e-18!49;UBERON:0000033!6.04e-17!63;UBERON:0002020!2.82e-15!34;UBERON:0003080!6.49e-15!40;UBERON:0002780!2.34e-14!39;UBERON:0001890!2.34e-14!39;UBERON:0006240!2.34e-14!39;UBERON:0003056!5.82e-14!49;UBERON:0002791!4.89e-12!29;UBERON:0003528!4.89e-12!29;UBERON:0001893!4.89e-12!29;UBERON:0000153!3.53e-10!94;UBERON:0000468!2.92e-09!333;UBERON:0000025!8.43e-09!114;UBERON:0007811!8.87e-09!86;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0004111!2.69e-08!122;UBERON:0000479!3.22e-07!349;UBERON:0000922!8.82e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.29e-28,73;UBERON:0001016,1.59e-27,75;UBERON:0004121,3.14e-25,95;UBERON:0000924,3.14e-25,95;UBERON:0006601,3.14e-25,95;UBERON:0000073,1.93e-21,54;UBERON:0002346,1.52e-19,64;UBERON:0003075,1.52e-19,64;UBERON:0007284,1.52e-19,64;UBERON:0001049,2.66e-19,52;UBERON:0005068,2.66e-19,52;UBERON:0006241,2.66e-19,52;UBERON:0007135,2.66e-19,52;UBERON:0010371,2.79e-18,73;UBERON:0000955,6.62e-17,47;UBERON:0006238,6.62e-17,47;UBERON:0002616,2.23e-16,46;UBERON:0010314,2.83e-16,92;UBERON:0002020,2.80e-15,34;UBERON:0003080,6.44e-15,40;UBERON:0002780,2.32e-14,39;UBERON:0001890,2.32e-14,39;UBERON:0006240,2.32e-14,39;UBERON:0003056,5.77e-14,49;UBERON:0003528,4.86e-12,29;UBERON:0002791,4.86e-12,29;UBERON:0001893,4.86e-12,29;UBERON:0000025,8.39e-09,114;UBERON:0000956,2.42e-08,21;UBERON:0001869,2.42e-08,21;UBERON:0000203,2.42e-08,21;UBERON:0004111,2.68e-08,122;UBERON:0000922,1.76e-07,320;UBERON:0000479,3.55e-07,349 | |||
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| ||
|short_description=p2@Ndst1 | |short_description=p2@Ndst1 | ||
}} | }} |
Revision as of 08:28, 14 November 2012
Short description: | p2@Ndst1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ndst1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1392 |
Association with transcript: | 9bp_to_uc008fav.1_5end |
EntrezGene: | Ndst1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.98e-18 | 43 |
ectodermal cell | 7.05e-18 | 44 |
neurectodermal cell | 7.05e-18 | 44 |
neuron | 1.70e-14 | 33 |
neuronal stem cell | 1.70e-14 | 33 |
neuroblast | 1.70e-14 | 33 |
electrically signaling cell | 1.70e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.27e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-13 | 23 |
electrically responsive cell | 1.27e-10 | 39 |
electrically active cell | 1.27e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.29e-28 | 73 |
nervous system | 1.59e-27 | 75 |
ectoderm-derived structure | 3.14e-25 | 95 |
ectoderm | 3.14e-25 | 95 |
presumptive ectoderm | 3.14e-25 | 95 |
regional part of nervous system | 1.93e-21 | 54 |
neurectoderm | 1.52e-19 | 64 |
neural plate | 1.52e-19 | 64 |
presumptive neural plate | 1.52e-19 | 64 |
neural tube | 2.66e-19 | 52 |
neural rod | 2.66e-19 | 52 |
future spinal cord | 2.66e-19 | 52 |
neural keel | 2.66e-19 | 52 |
ecto-epithelium | 2.79e-18 | 73 |
brain | 6.62e-17 | 47 |
future brain | 6.62e-17 | 47 |
regional part of brain | 2.23e-16 | 46 |
structure with developmental contribution from neural crest | 2.83e-16 | 92 |
gray matter | 2.80e-15 | 34 |
anterior neural tube | 6.44e-15 | 40 |
regional part of forebrain | 2.32e-14 | 39 |
forebrain | 2.32e-14 | 39 |
future forebrain | 2.32e-14 | 39 |
pre-chordal neural plate | 5.77e-14 | 49 |
brain grey matter | 4.86e-12 | 29 |
regional part of telencephalon | 4.86e-12 | 29 |
telencephalon | 4.86e-12 | 29 |
tube | 8.39e-09 | 114 |
cerebral cortex | 2.42e-08 | 21 |
cerebral hemisphere | 2.42e-08 | 21 |
pallium | 2.42e-08 | 21 |
anatomical conduit | 2.68e-08 | 122 |
embryo | 1.76e-07 | 320 |
tissue | 3.55e-07 | 349 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.