FFCP PHASE1:Mm9::chr6:86799482..86799588,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:86799482..86799588,+ | |id=chr6:86799482..86799588,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.94e-18!94;UBERON:0007811!7.91e-18!86;UBERON:0001049!1.45e-13!52;UBERON:0005068!1.45e-13!52;UBERON:0006241!1.45e-13!52;UBERON:0007135!1.45e-13!52;UBERON:0000033!2.80e-13!63;UBERON:0001017!3.84e-13!73;UBERON:0005743!3.84e-13!73;UBERON:0000955!4.39e-13!50;UBERON:0006238!4.39e-13!50;UBERON:0002616!1.53e-12!49;UBERON:0000073!1.68e-12!75;UBERON:0001016!1.68e-12!75;UBERON:0004121!2.06e-12!102;UBERON:0000924!2.06e-12!102;UBERON:0006601!2.06e-12!102;UBERON:0002346!1.73e-11!71;UBERON:0003075!1.73e-11!71;UBERON:0007284!1.73e-11!71;UBERON:0002020!4.21e-10!34;UBERON:0003056!7.08e-10!49;UBERON:0003080!1.24e-09!40;UBERON:0002780!4.36e-09!39;UBERON:0001890!4.36e-09!39;UBERON:0006240!4.36e-09!39;UBERON:0002791!4.31e-08!29;UBERON:0003528!4.31e-08!29;UBERON:0001893!4.31e-08!29;UBERON:0000468!1.16e-07!333;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000477!1.41e-07!154;UBERON:0000475!2.07e-07!200 | |ontology_enrichment_uberon=UBERON:0000153!3.94e-18!94;UBERON:0007811!7.91e-18!86;UBERON:0001049!1.45e-13!52;UBERON:0005068!1.45e-13!52;UBERON:0006241!1.45e-13!52;UBERON:0007135!1.45e-13!52;UBERON:0000033!2.80e-13!63;UBERON:0001017!3.84e-13!73;UBERON:0005743!3.84e-13!73;UBERON:0000955!4.39e-13!50;UBERON:0006238!4.39e-13!50;UBERON:0002616!1.53e-12!49;UBERON:0000073!1.68e-12!75;UBERON:0001016!1.68e-12!75;UBERON:0004121!2.06e-12!102;UBERON:0000924!2.06e-12!102;UBERON:0006601!2.06e-12!102;UBERON:0002346!1.73e-11!71;UBERON:0003075!1.73e-11!71;UBERON:0007284!1.73e-11!71;UBERON:0002020!4.21e-10!34;UBERON:0003056!7.08e-10!49;UBERON:0003080!1.24e-09!40;UBERON:0002780!4.36e-09!39;UBERON:0001890!4.36e-09!39;UBERON:0006240!4.36e-09!39;UBERON:0002791!4.31e-08!29;UBERON:0003528!4.31e-08!29;UBERON:0001893!4.31e-08!29;UBERON:0000468!1.16e-07!333;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000477!1.41e-07!154;UBERON:0000475!2.07e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-14,54;UBERON:0010314,1.04e-13,92;UBERON:0001049,1.45e-13,52;UBERON:0005068,1.45e-13,52;UBERON:0006241,1.45e-13,52;UBERON:0007135,1.45e-13,52;UBERON:0004121,2.32e-13,95;UBERON:0000924,2.32e-13,95;UBERON:0006601,2.32e-13,95;UBERON:0001017,3.84e-13,73;UBERON:0002346,8.19e-13,64;UBERON:0003075,8.19e-13,64;UBERON:0007284,8.19e-13,64;UBERON:0010371,9.46e-13,73;UBERON:0001016,1.68e-12,75;UBERON:0000955,2.00e-11,47;UBERON:0006238,2.00e-11,47;UBERON:0002616,6.62e-11,46;UBERON:0002020,4.21e-10,34;UBERON:0003056,7.08e-10,49;UBERON:0003080,1.24e-09,40;UBERON:0002780,4.36e-09,39;UBERON:0001890,4.36e-09,39;UBERON:0006240,4.36e-09,39;UBERON:0003528,4.31e-08,29;UBERON:0002791,4.31e-08,29;UBERON:0001893,4.31e-08,29;UBERON:0002021,1.19e-07,10;UBERON:0000411,1.19e-07,10;UBERON:0001950,1.19e-07,10 | |||
|phase1_expression=24.6629224541383,23.0323769041978,20.9299650119187,32.9685990324445,31.5564309866199,10.5763941304491,9.57811826441655,39.1243670027976,20.695942156295,27.6196141059952,9.41698825240277,8.45584885350566,57.6946459868163,53.9383882925214,8.99396356902289,9.51633756732182,11.8925519281785,13.0916798623669,19.4702495720149,14.429248161133,41.416082303571,6.7517846816602,9.14199261986274,9.5995453676044,8.02932483735095,10.3361753540704,11.630573896295,13.1437451938392,7.41091335879858,11.089325709437,5.54326276638262,12.065582795733,7.38077745101484,0,2.02196133825892,4.65457007003779,3.26670970019791,13.811543814318,7.0320181007142,8.89990364755457,9.99993529652724,6.14740936462601,13.1087795318411,13.2191658874356,13.6858857146345,17.0698479510364,17.9950009200049,14.171635164729,12.5221124158649,19.8318497055769,21.6978953519312,12.9377307928474,13.2548258785612,64.5572306390096,56.7998520550764,17.7509010864803,24.9284092746718,20.6268836910977,23.6710259205729,28.5655128806898,31.0577387718028,14.5703148789727,17.7858959222228,7.64914759689189,14.8329954385046,12.7886420690298,11.085204089181,16.5213871288268,21.1526809109294,22.0059679480656,17.8776217148675,40.5624397853401,32.4676755198872,19.2310554767478,14.9518934788449,19.3035945188104,70.4741638396088,101.639121115809,90.9350676876961,28.0917792865313,24.0612502674337,26.5665818983948,81.2422527094019,63.5921749335798,91.6789486660861,41.8372591372608,35.8776635613739,32.247104127777,17.5684768532987,16.7768863437064,27.8269909153611,6.88339101585109,15.6393406752783,10.7940638327563,11.0461990966104,10.3046184032387,12.6399978118577,12.6118438707763,8.83272415649754,12.3668851078619,22.9574774235989,21.815501160434,40.7688383530633,35.5533351576666,9.95858788651585,8.61423542615335,7.58286667522175,16.3282947998256,46.0909432891966,31.7666177598725,20.8182392119363,15.8322048722313,17.0655467969483,17.3331036635516,20.1076689202055,15.9596570988688,30.8993709667967,25.7386855317443,17.6922110389975,25.0738617418484,17.6673214768315,21.3345111379498,9.31958806090611,118.283441992665,114.357901920146,14.3055950916811,3.47463861067169,4.79922184794726,3.55796635804581,95.7162185796817,78.6901036848038,27.6439574648302,112.464335164403,108.934784822721,83.115217823824,74.1442572219652,22.8120175024708,19.4074874151745,13.3943061969848,34.5124643653817,16.0048144844126,18.3921683546778,18.7264614997563,17.6324636867787,28.439256645255,27.288222420673,27.9231139187992,46.3079033622838,14.4430555265004,24.016472181313,20.9381837755099,19.9468116509093,23.3559689349502,28.2084254882955,20.9897779136102,12.5391588095651,3.51106593656617,3.08817488537658,4.54661599032948,19.6769483908727,20.8728193383176,19.2666405763286,25.8051761787879,22.0375939557092,23.7571353846563,28.1366073147993,31.6562613651551,29.0745702494252,26.3295759861569,26.2667942526552,35.9134826288141,32.3101972209984,24.8091630278887,29.1227928710007,109.771353150474,27.7842453424068,27.755177770639,21.9493970330742,15.1434657880016,18.1144604051142,17.0105048945163,21.3784536100743,15.5664630691409,16.3594038456801,17.0830462156024,15.811099653505,14.8287773192159,14.1259095149217,17.5467678407208,20.6728463990471,15.1296634912286,18.1218558661474,11.1904061562318,16.9087798662399,33.8123207019241,16.9030602111611,19.7831536910978,22.3733265450116,27.5078936490519,32.4742325555125,29.2017633784957,23.0752696533767,10.9687472022245,11.0117769772622,10.0245087507734,8.7696223830093,11.3601667977562,8.20002343158217,11.4581633301639,9.78166867332756,9.40384315295205,10.158772287959,7.18841032636773,13.0249331683976,8.11297950097858,10.3557339958316,9.14926808961752,10.6137574699941,26.7892125741577,16.8647356475731,18.2520773615069,17.8232340063948,20.1833613528112,21.4408009525524,21.4239276797412,21.8549685600735,25.2216230569906,28.7904096543407,28.2234940523752,26.2181303545181,22.1036776788346,20.6848153771562,21.1107797514981,10.3342079925555,15.2446924635901,14.9005843004556,74.1743725743599,73.3745158067192,15.0820149746541,17.6729649043061,18.2994767261429,16.3984272604588,18.0955654095551,20.5513166239195,19.6062833192507,20.3815102167959,20.2405350837447,18.704374906324,24.903130010631,79.0450438397645,25.2653351670718,16.2039699337202,23.6186091062685,29.0347416431662,35.84118735179,11.8962511715941,14.511530734308,18.483297816078,22.147641966058,19.3684143204674,21.7079766261306,21.0849563096953,21.3898427030833,30.97160227771,20.0295356292498,29.9093075419742,59.9173706126667,15.1251318986301,13.9707378485375,20.7906923980645,28.7291178500483,30.322698992352,25.834196234533,23.4438010818241,24.4058576386259,21.183207086382,35.9461288829588,29.5146392765249,20.3445177636841,23.4014148721245,23.3969794246147,26.5908257586999,18.0718118710507,95.4940305354125,12.9861869406368,16.9237231729842,16.2971184085346,11.3021074202815,14.3528939107076,12.5827995263587,8.15896463970505,6.71766971153558,4.97519905695926,13.3653886522116,16.9239756565907,21.7551829825728,15.8767851008048,18.1906817532588,15.0670168984863,17.3975006836419,22.4817399572914,21.2022313007064,14.5168770086808,33.552322906694,36.0763480757882,17.3439193411015,14.7258056506817,22.9452402245976,16.5324574051496,14.5302267922069,16.4300134104056,22.9159717325352,20.2378534741622,22.2257391159926,25.9227005632079,29.0730230977924,19.0561702372754,17.255440803691,25.984164595559,29.7184314808019,32.5837421841274,31.2508168751919,33.3778331414545,27.8667401856887,35.5885787078849,31.9619006883784,42.0043465988333,41.467303746982,53.7633750035217,12.923631866067,16.6489465030549,19.3781930276468,11.7519231454855,25.8874056003135,29.6538311212868,17.5825559296574,15.8632600518509,21.0660283694853,81.3242653368576,72.2710621316268,89.3717000965459,110.501596246991,89.7458100899541,92.9134493789332,101.253375034771,106.275803960916,91.5347666148093,113.389508273649,16.3984009182999,24.7395421508639,19.8050982674796,23.8244582726928,12.7864029203069,17.0974462858513,19.7799587743438,20.8095407811283,19.2551525755089,19.4576853058124,19.7713853914387,22.4465346249431,20.8820561657838,23.0490548657529,23.318800395979,24.2909782554368,26.5375106413719,23.534924896572,18.5438655361488,21.9326391000252,13.7147700954166,21.2970967391205,19.7902037656276,17.4415699958794,18.6336573222355,21.9151834439442,24.6952763378243,18.9410192235247,21.3212458738003,18.5176949647054,21.9474783529722,23.3455623230085,25.7815557196904,21.3812840836633,22.5700734847935,25.2308683717325,23.1592292360954,24.7101712155543,28.11938481412,22.2797333310711,19.245030356495 | |phase1_expression=24.6629224541383,23.0323769041978,20.9299650119187,32.9685990324445,31.5564309866199,10.5763941304491,9.57811826441655,39.1243670027976,20.695942156295,27.6196141059952,9.41698825240277,8.45584885350566,57.6946459868163,53.9383882925214,8.99396356902289,9.51633756732182,11.8925519281785,13.0916798623669,19.4702495720149,14.429248161133,41.416082303571,6.7517846816602,9.14199261986274,9.5995453676044,8.02932483735095,10.3361753540704,11.630573896295,13.1437451938392,7.41091335879858,11.089325709437,5.54326276638262,12.065582795733,7.38077745101484,0,2.02196133825892,4.65457007003779,3.26670970019791,13.811543814318,7.0320181007142,8.89990364755457,9.99993529652724,6.14740936462601,13.1087795318411,13.2191658874356,13.6858857146345,17.0698479510364,17.9950009200049,14.171635164729,12.5221124158649,19.8318497055769,21.6978953519312,12.9377307928474,13.2548258785612,64.5572306390096,56.7998520550764,17.7509010864803,24.9284092746718,20.6268836910977,23.6710259205729,28.5655128806898,31.0577387718028,14.5703148789727,17.7858959222228,7.64914759689189,14.8329954385046,12.7886420690298,11.085204089181,16.5213871288268,21.1526809109294,22.0059679480656,17.8776217148675,40.5624397853401,32.4676755198872,19.2310554767478,14.9518934788449,19.3035945188104,70.4741638396088,101.639121115809,90.9350676876961,28.0917792865313,24.0612502674337,26.5665818983948,81.2422527094019,63.5921749335798,91.6789486660861,41.8372591372608,35.8776635613739,32.247104127777,17.5684768532987,16.7768863437064,27.8269909153611,6.88339101585109,15.6393406752783,10.7940638327563,11.0461990966104,10.3046184032387,12.6399978118577,12.6118438707763,8.83272415649754,12.3668851078619,22.9574774235989,21.815501160434,40.7688383530633,35.5533351576666,9.95858788651585,8.61423542615335,7.58286667522175,16.3282947998256,46.0909432891966,31.7666177598725,20.8182392119363,15.8322048722313,17.0655467969483,17.3331036635516,20.1076689202055,15.9596570988688,30.8993709667967,25.7386855317443,17.6922110389975,25.0738617418484,17.6673214768315,21.3345111379498,9.31958806090611,118.283441992665,114.357901920146,14.3055950916811,3.47463861067169,4.79922184794726,3.55796635804581,95.7162185796817,78.6901036848038,27.6439574648302,112.464335164403,108.934784822721,83.115217823824,74.1442572219652,22.8120175024708,19.4074874151745,13.3943061969848,34.5124643653817,16.0048144844126,18.3921683546778,18.7264614997563,17.6324636867787,28.439256645255,27.288222420673,27.9231139187992,46.3079033622838,14.4430555265004,24.016472181313,20.9381837755099,19.9468116509093,23.3559689349502,28.2084254882955,20.9897779136102,12.5391588095651,3.51106593656617,3.08817488537658,4.54661599032948,19.6769483908727,20.8728193383176,19.2666405763286,25.8051761787879,22.0375939557092,23.7571353846563,28.1366073147993,31.6562613651551,29.0745702494252,26.3295759861569,26.2667942526552,35.9134826288141,32.3101972209984,24.8091630278887,29.1227928710007,109.771353150474,27.7842453424068,27.755177770639,21.9493970330742,15.1434657880016,18.1144604051142,17.0105048945163,21.3784536100743,15.5664630691409,16.3594038456801,17.0830462156024,15.811099653505,14.8287773192159,14.1259095149217,17.5467678407208,20.6728463990471,15.1296634912286,18.1218558661474,11.1904061562318,16.9087798662399,33.8123207019241,16.9030602111611,19.7831536910978,22.3733265450116,27.5078936490519,32.4742325555125,29.2017633784957,23.0752696533767,10.9687472022245,11.0117769772622,10.0245087507734,8.7696223830093,11.3601667977562,8.20002343158217,11.4581633301639,9.78166867332756,9.40384315295205,10.158772287959,7.18841032636773,13.0249331683976,8.11297950097858,10.3557339958316,9.14926808961752,10.6137574699941,26.7892125741577,16.8647356475731,18.2520773615069,17.8232340063948,20.1833613528112,21.4408009525524,21.4239276797412,21.8549685600735,25.2216230569906,28.7904096543407,28.2234940523752,26.2181303545181,22.1036776788346,20.6848153771562,21.1107797514981,10.3342079925555,15.2446924635901,14.9005843004556,74.1743725743599,73.3745158067192,15.0820149746541,17.6729649043061,18.2994767261429,16.3984272604588,18.0955654095551,20.5513166239195,19.6062833192507,20.3815102167959,20.2405350837447,18.704374906324,24.903130010631,79.0450438397645,25.2653351670718,16.2039699337202,23.6186091062685,29.0347416431662,35.84118735179,11.8962511715941,14.511530734308,18.483297816078,22.147641966058,19.3684143204674,21.7079766261306,21.0849563096953,21.3898427030833,30.97160227771,20.0295356292498,29.9093075419742,59.9173706126667,15.1251318986301,13.9707378485375,20.7906923980645,28.7291178500483,30.322698992352,25.834196234533,23.4438010818241,24.4058576386259,21.183207086382,35.9461288829588,29.5146392765249,20.3445177636841,23.4014148721245,23.3969794246147,26.5908257586999,18.0718118710507,95.4940305354125,12.9861869406368,16.9237231729842,16.2971184085346,11.3021074202815,14.3528939107076,12.5827995263587,8.15896463970505,6.71766971153558,4.97519905695926,13.3653886522116,16.9239756565907,21.7551829825728,15.8767851008048,18.1906817532588,15.0670168984863,17.3975006836419,22.4817399572914,21.2022313007064,14.5168770086808,33.552322906694,36.0763480757882,17.3439193411015,14.7258056506817,22.9452402245976,16.5324574051496,14.5302267922069,16.4300134104056,22.9159717325352,20.2378534741622,22.2257391159926,25.9227005632079,29.0730230977924,19.0561702372754,17.255440803691,25.984164595559,29.7184314808019,32.5837421841274,31.2508168751919,33.3778331414545,27.8667401856887,35.5885787078849,31.9619006883784,42.0043465988333,41.467303746982,53.7633750035217,12.923631866067,16.6489465030549,19.3781930276468,11.7519231454855,25.8874056003135,29.6538311212868,17.5825559296574,15.8632600518509,21.0660283694853,81.3242653368576,72.2710621316268,89.3717000965459,110.501596246991,89.7458100899541,92.9134493789332,101.253375034771,106.275803960916,91.5347666148093,113.389508273649,16.3984009182999,24.7395421508639,19.8050982674796,23.8244582726928,12.7864029203069,17.0974462858513,19.7799587743438,20.8095407811283,19.2551525755089,19.4576853058124,19.7713853914387,22.4465346249431,20.8820561657838,23.0490548657529,23.318800395979,24.2909782554368,26.5375106413719,23.534924896572,18.5438655361488,21.9326391000252,13.7147700954166,21.2970967391205,19.7902037656276,17.4415699958794,18.6336573222355,21.9151834439442,24.6952763378243,18.9410192235247,21.3212458738003,18.5176949647054,21.9474783529722,23.3455623230085,25.7815557196904,21.3812840836633,22.5700734847935,25.2308683717325,23.1592292360954,24.7101712155543,28.11938481412,22.2797333310711,19.245030356495 | ||
|short_description=p1@Aak1 | |short_description=p1@Aak1 | ||
}} | }} |
Revision as of 02:11, 15 November 2012
Short description: | p1@Aak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000089519, NM_001040106, NM_177762, uc009csr.1, uc009css.1, uc009cst.1_5end |
EntrezGene: | Aak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.09e-14 | 54 |
structure with developmental contribution from neural crest | 1.04e-13 | 92 |
neural tube | 1.45e-13 | 52 |
neural rod | 1.45e-13 | 52 |
future spinal cord | 1.45e-13 | 52 |
neural keel | 1.45e-13 | 52 |
ectoderm-derived structure | 2.32e-13 | 95 |
ectoderm | 2.32e-13 | 95 |
presumptive ectoderm | 2.32e-13 | 95 |
central nervous system | 3.84e-13 | 73 |
neurectoderm | 8.19e-13 | 64 |
neural plate | 8.19e-13 | 64 |
presumptive neural plate | 8.19e-13 | 64 |
ecto-epithelium | 9.46e-13 | 73 |
nervous system | 1.68e-12 | 75 |
brain | 2.00e-11 | 47 |
future brain | 2.00e-11 | 47 |
regional part of brain | 6.62e-11 | 46 |
gray matter | 4.21e-10 | 34 |
pre-chordal neural plate | 7.08e-10 | 49 |
anterior neural tube | 1.24e-09 | 40 |
regional part of forebrain | 4.36e-09 | 39 |
forebrain | 4.36e-09 | 39 |
future forebrain | 4.36e-09 | 39 |
brain grey matter | 4.31e-08 | 29 |
regional part of telencephalon | 4.31e-08 | 29 |
telencephalon | 4.31e-08 | 29 |
occipital lobe | 1.19e-07 | 10 |
visual cortex | 1.19e-07 | 10 |
neocortex | 1.19e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.