FFCP PHASE1:Mm9::chr4:150482563..150482655,-: Difference between revisions
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|id=chr4:150482563..150482655,- | |id=chr4:150482563..150482655,- | ||
|ontology_enrichment_celltype=CL:0000117!3.14e-13!23;CL:0000337!3.14e-13!23;CL:0000540!8.41e-13!33;CL:0000047!8.41e-13!33;CL:0000031!8.41e-13!33;CL:0000404!8.41e-13!33;CL:0000393!5.85e-08!39;CL:0000211!5.85e-08!39;CL:0000221!5.42e-07!44;CL:0000133!5.42e-07!44;CL:0002319!9.74e-07!43 | |ontology_enrichment_celltype=CL:0000117!3.14e-13!23;CL:0000337!3.14e-13!23;CL:0000540!8.41e-13!33;CL:0000047!8.41e-13!33;CL:0000031!8.41e-13!33;CL:0000404!8.41e-13!33;CL:0000393!5.85e-08!39;CL:0000211!5.85e-08!39;CL:0000221!5.42e-07!44;CL:0000133!5.42e-07!44;CL:0002319!9.74e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-13,23;CL:0000337,1.36e-13,23;CL:0000540,3.76e-13,33;CL:0000047,3.76e-13,33;CL:0000031,3.76e-13,33;CL:0000404,3.76e-13,33;CL:0000393,2.05e-08,39;CL:0000211,2.05e-08,39;CL:0000221,7.69e-07,44;CL:0000133,7.69e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.70e-24!102;UBERON:0000924!2.70e-24!102;UBERON:0006601!2.70e-24!102;UBERON:0000033!7.76e-23!63;UBERON:0002346!6.74e-22!71;UBERON:0003075!6.74e-22!71;UBERON:0007284!6.74e-22!71;UBERON:0001017!4.48e-21!73;UBERON:0005743!4.48e-21!73;UBERON:0000073!3.12e-20!75;UBERON:0001016!3.12e-20!75;UBERON:0001049!1.93e-19!52;UBERON:0005068!1.93e-19!52;UBERON:0006241!1.93e-19!52;UBERON:0007135!1.93e-19!52;UBERON:0000955!1.86e-18!50;UBERON:0006238!1.86e-18!50;UBERON:0003056!2.59e-18!49;UBERON:0002616!8.75e-18!49;UBERON:0002020!3.33e-16!34;UBERON:0003080!4.98e-15!40;UBERON:0002780!2.43e-14!39;UBERON:0001890!2.43e-14!39;UBERON:0006240!2.43e-14!39;UBERON:0002791!3.87e-13!29;UBERON:0003528!3.87e-13!29;UBERON:0001893!3.87e-13!29;UBERON:0007811!3.82e-11!86;UBERON:0000153!1.48e-10!94;UBERON:0000468!5.76e-10!333;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0000922!3.05e-07!328;UBERON:0002619!6.11e-07!17;UBERON:0004111!6.56e-07!122 | |ontology_enrichment_uberon=UBERON:0004121!2.70e-24!102;UBERON:0000924!2.70e-24!102;UBERON:0006601!2.70e-24!102;UBERON:0000033!7.76e-23!63;UBERON:0002346!6.74e-22!71;UBERON:0003075!6.74e-22!71;UBERON:0007284!6.74e-22!71;UBERON:0001017!4.48e-21!73;UBERON:0005743!4.48e-21!73;UBERON:0000073!3.12e-20!75;UBERON:0001016!3.12e-20!75;UBERON:0001049!1.93e-19!52;UBERON:0005068!1.93e-19!52;UBERON:0006241!1.93e-19!52;UBERON:0007135!1.93e-19!52;UBERON:0000955!1.86e-18!50;UBERON:0006238!1.86e-18!50;UBERON:0003056!2.59e-18!49;UBERON:0002616!8.75e-18!49;UBERON:0002020!3.33e-16!34;UBERON:0003080!4.98e-15!40;UBERON:0002780!2.43e-14!39;UBERON:0001890!2.43e-14!39;UBERON:0006240!2.43e-14!39;UBERON:0002791!3.87e-13!29;UBERON:0003528!3.87e-13!29;UBERON:0001893!3.87e-13!29;UBERON:0007811!3.82e-11!86;UBERON:0000153!1.48e-10!94;UBERON:0000468!5.76e-10!333;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0000922!3.05e-07!328;UBERON:0002619!6.11e-07!17;UBERON:0004111!6.56e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.88e-27,92;UBERON:0004121,1.20e-24,95;UBERON:0000924,1.20e-24,95;UBERON:0006601,1.20e-24,95;UBERON:0010371,4.22e-24,73;UBERON:0002346,1.01e-23,64;UBERON:0003075,1.01e-23,64;UBERON:0007284,1.01e-23,64;UBERON:0000073,1.74e-21,54;UBERON:0001017,2.25e-21,73;UBERON:0001016,2.45e-20,75;UBERON:0001049,6.37e-20,52;UBERON:0005068,6.37e-20,52;UBERON:0006241,6.37e-20,52;UBERON:0007135,6.37e-20,52;UBERON:0003056,8.44e-19,49;UBERON:0000955,8.56e-17,47;UBERON:0006238,8.56e-17,47;UBERON:0002020,1.28e-16,34;UBERON:0002616,4.02e-16,46;UBERON:0003080,2.05e-15,40;UBERON:0002780,1.05e-14,39;UBERON:0001890,1.05e-14,39;UBERON:0006240,1.05e-14,39;UBERON:0003528,1.84e-13,29;UBERON:0002791,1.84e-13,29;UBERON:0001893,1.84e-13,29;UBERON:0000956,1.08e-08,21;UBERON:0001869,1.08e-08,21;UBERON:0000203,1.08e-08,21;UBERON:0004111,3.87e-07,122;UBERON:0002619,4.47e-07,17;UBERON:0000922,6.23e-07,320;UBERON:0000025,9.41e-07,114 | |||
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| ||
|short_description=p2@Camta1 | |short_description=p2@Camta1 | ||
}} | }} |
Revision as of 04:17, 15 November 2012
Short description: | p2@Camta1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Camta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_uc008vyl.2_5end |
EntrezGene: | Camta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-13 | 23 |
neuron | 3.76e-13 | 33 |
neuronal stem cell | 3.76e-13 | 33 |
neuroblast | 3.76e-13 | 33 |
electrically signaling cell | 3.76e-13 | 33 |
electrically responsive cell | 2.05e-08 | 39 |
electrically active cell | 2.05e-08 | 39 |
ectodermal cell | 7.69e-07 | 44 |
neurectodermal cell | 7.69e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.88e-27 | 92 |
ectoderm-derived structure | 1.20e-24 | 95 |
ectoderm | 1.20e-24 | 95 |
presumptive ectoderm | 1.20e-24 | 95 |
ecto-epithelium | 4.22e-24 | 73 |
neurectoderm | 1.01e-23 | 64 |
neural plate | 1.01e-23 | 64 |
presumptive neural plate | 1.01e-23 | 64 |
regional part of nervous system | 1.74e-21 | 54 |
central nervous system | 2.25e-21 | 73 |
nervous system | 2.45e-20 | 75 |
neural tube | 6.37e-20 | 52 |
neural rod | 6.37e-20 | 52 |
future spinal cord | 6.37e-20 | 52 |
neural keel | 6.37e-20 | 52 |
pre-chordal neural plate | 8.44e-19 | 49 |
brain | 8.56e-17 | 47 |
future brain | 8.56e-17 | 47 |
gray matter | 1.28e-16 | 34 |
regional part of brain | 4.02e-16 | 46 |
anterior neural tube | 2.05e-15 | 40 |
regional part of forebrain | 1.05e-14 | 39 |
forebrain | 1.05e-14 | 39 |
future forebrain | 1.05e-14 | 39 |
brain grey matter | 1.84e-13 | 29 |
regional part of telencephalon | 1.84e-13 | 29 |
telencephalon | 1.84e-13 | 29 |
cerebral cortex | 1.08e-08 | 21 |
cerebral hemisphere | 1.08e-08 | 21 |
pallium | 1.08e-08 | 21 |
anatomical conduit | 3.87e-07 | 122 |
regional part of cerebral cortex | 4.47e-07 | 17 |
embryo | 6.23e-07 | 320 |
tube | 9.41e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.