FFCP PHASE1:Hg19::chr2:39892073..39892078,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!7.62e-47!20;UBERON:0001049!8.04e-46!57;UBERON:0005068!8.04e-46!57;UBERON:0006241!8.04e-46!57;UBERON:0007135!8.04e-46!57;UBERON:0002616!3.59e-44!59;UBERON:0002619!1.37e-42!22;UBERON:0001869!9.14e-40!32;UBERON:0000956!1.96e-37!25;UBERON:0000203!1.96e-37!25;UBERON:0001017!2.39e-37!82;UBERON:0001893!2.40e-37!34;UBERON:0000955!9.29e-37!69;UBERON:0006238!9.29e-37!69;UBERON:0005743!1.80e-35!86;UBERON:0002791!5.35e-33!33;UBERON:0003075!1.49e-32!86;UBERON:0007284!1.49e-32!86;UBERON:0002020!5.47e-32!34;UBERON:0003528!5.47e-32!34;UBERON:0000073!8.19e-32!94;UBERON:0001016!8.19e-32!94;UBERON:0007023!1.26e-31!115;UBERON:0002346!5.92e-31!90;UBERON:0002780!1.09e-30!41;UBERON:0001890!1.09e-30!41;UBERON:0006240!1.09e-30!41;UBERON:0003080!6.46e-30!42;UBERON:0004733!1.73e-21!12;UBERON:0002028!1.73e-21!12;UBERON:0007277!1.73e-21!12;UBERON:0000033!1.86e-21!123;UBERON:0000153!2.70e-20!129;UBERON:0007811!2.70e-20!129;UBERON:0003056!6.04e-20!61;UBERON:0004732!8.42e-20!13;UBERON:0000200!1.33e-19!6;UBERON:0003076!4.24e-17!15;UBERON:0003057!4.24e-17!15;UBERON:0004121!3.51e-16!169;UBERON:0000924!1.01e-15!173;UBERON:0006601!1.01e-15!173;UBERON:0001871!1.48e-14!7;UBERON:0002680!1.45e-13!9;UBERON:0001895!1.45e-13!9;UBERON:0010092!1.45e-13!9;UBERON:0002021!1.57e-13!5;UBERON:0001872!2.41e-13!5;UBERON:0000025!2.35e-12!194;UBERON:0002037!5.88e-12!6;UBERON:0006215!5.88e-12!6;UBERON:0002771!8.26e-11!3;UBERON:0000064!1.70e-10!219;UBERON:0001896!2.88e-10!3;UBERON:0005290!2.88e-10!3;UBERON:0010096!2.88e-10!3;UBERON:0004111!3.52e-09!241;UBERON:0000477!4.90e-09!286;UBERON:0007190!8.78e-09!1;UBERON:0002022!1.10e-08!1;UBERON:0002298!1.57e-08!8;UBERON:0002902!1.84e-08!1;UBERON:0009899!1.84e-08!1;UBERON:0000481!1.84e-08!347;UBERON:0003112!2.29e-08!1;UBERON:0000032!2.29e-08!1;UBERON:0005253!2.29e-08!1;UBERON:0003128!2.29e-08!1;UBERON:0002241!2.29e-08!1;UBERON:0001703!2.29e-08!1;UBERON:0004761!2.29e-08!1;UBERON:0009617!2.29e-08!1;UBERON:0002581!3.06e-08!1;UBERON:0001882!3.53e-08!1;UBERON:0005403!3.53e-08!1;UBERON:0000483!4.70e-08!309;UBERON:0000119!6.18e-08!312;UBERON:0000475!5.87e-07!365 | |ontology_enrichment_uberon=UBERON:0001950!7.62e-47!20;UBERON:0001049!8.04e-46!57;UBERON:0005068!8.04e-46!57;UBERON:0006241!8.04e-46!57;UBERON:0007135!8.04e-46!57;UBERON:0002616!3.59e-44!59;UBERON:0002619!1.37e-42!22;UBERON:0001869!9.14e-40!32;UBERON:0000956!1.96e-37!25;UBERON:0000203!1.96e-37!25;UBERON:0001017!2.39e-37!82;UBERON:0001893!2.40e-37!34;UBERON:0000955!9.29e-37!69;UBERON:0006238!9.29e-37!69;UBERON:0005743!1.80e-35!86;UBERON:0002791!5.35e-33!33;UBERON:0003075!1.49e-32!86;UBERON:0007284!1.49e-32!86;UBERON:0002020!5.47e-32!34;UBERON:0003528!5.47e-32!34;UBERON:0000073!8.19e-32!94;UBERON:0001016!8.19e-32!94;UBERON:0007023!1.26e-31!115;UBERON:0002346!5.92e-31!90;UBERON:0002780!1.09e-30!41;UBERON:0001890!1.09e-30!41;UBERON:0006240!1.09e-30!41;UBERON:0003080!6.46e-30!42;UBERON:0004733!1.73e-21!12;UBERON:0002028!1.73e-21!12;UBERON:0007277!1.73e-21!12;UBERON:0000033!1.86e-21!123;UBERON:0000153!2.70e-20!129;UBERON:0007811!2.70e-20!129;UBERON:0003056!6.04e-20!61;UBERON:0004732!8.42e-20!13;UBERON:0000200!1.33e-19!6;UBERON:0003076!4.24e-17!15;UBERON:0003057!4.24e-17!15;UBERON:0004121!3.51e-16!169;UBERON:0000924!1.01e-15!173;UBERON:0006601!1.01e-15!173;UBERON:0001871!1.48e-14!7;UBERON:0002680!1.45e-13!9;UBERON:0001895!1.45e-13!9;UBERON:0010092!1.45e-13!9;UBERON:0002021!1.57e-13!5;UBERON:0001872!2.41e-13!5;UBERON:0000025!2.35e-12!194;UBERON:0002037!5.88e-12!6;UBERON:0006215!5.88e-12!6;UBERON:0002771!8.26e-11!3;UBERON:0000064!1.70e-10!219;UBERON:0001896!2.88e-10!3;UBERON:0005290!2.88e-10!3;UBERON:0010096!2.88e-10!3;UBERON:0004111!3.52e-09!241;UBERON:0000477!4.90e-09!286;UBERON:0007190!8.78e-09!1;UBERON:0002022!1.10e-08!1;UBERON:0002298!1.57e-08!8;UBERON:0002902!1.84e-08!1;UBERON:0009899!1.84e-08!1;UBERON:0000481!1.84e-08!347;UBERON:0003112!2.29e-08!1;UBERON:0000032!2.29e-08!1;UBERON:0005253!2.29e-08!1;UBERON:0003128!2.29e-08!1;UBERON:0002241!2.29e-08!1;UBERON:0001703!2.29e-08!1;UBERON:0004761!2.29e-08!1;UBERON:0009617!2.29e-08!1;UBERON:0002581!3.06e-08!1;UBERON:0001882!3.53e-08!1;UBERON:0005403!3.53e-08!1;UBERON:0000483!4.70e-08!309;UBERON:0000119!6.18e-08!312;UBERON:0000475!5.87e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.24e-09;53!UBERON:0002616;8.24e-09;53!UBERON:0001016;9.24e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.54e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.24e-09;53!UBERON:0002616;8.24e-09;53!UBERON:0001016;9.24e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.54e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62908681585416,4.20201187738654,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.303747783290123,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62908681585416,4.20201187738654,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.303747783290123,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p25@TMEM178 | |short_description=p25@TMEM178 | ||
}} | }} |
Revision as of 04:44, 17 November 2012
Short description: | p25@TMEM178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_TMEM178_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -43bp_to_ENST00000437068_5end |
EntrezGene: | TMEM178 |
HGNC: | 28517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.