FFCP PHASE1:Hg19::chr12:56324854..56324865,+: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000791;3.41e-29;18!CL:0000789;3.41e-29;18!CL:0002419;3.41e-29;18!CL:0000084;7.92e-29;25!CL:0000624;1.03e-27;6!CL:0000898;9.61e-15;3!CL:0000307;9.61e-15;3!CL:0002202;5.67e-13;9!CL:0002632;5.67e-13;9!CL:0002368;1.16e-12;13!CL:0000815;1.56e-10;2!CL:0000792;1.56e-10;2!CL:0002677;1.56e-10;2!CL:0000625;2.13e-10;11!CL:0002328;2.71e-07;3!CL:0000542;5.82e-07;53!CL:0002076;7.02e-07;42 | |ontology_enrichment_celltype_v019=CL:0000791;3.41e-29;18!CL:0000789;3.41e-29;18!CL:0002419;3.41e-29;18!CL:0000084;7.92e-29;25!CL:0000624;1.03e-27;6!CL:0000898;9.61e-15;3!CL:0000307;9.61e-15;3!CL:0002202;5.67e-13;9!CL:0002632;5.67e-13;9!CL:0002368;1.16e-12;13!CL:0000815;1.56e-10;2!CL:0000792;1.56e-10;2!CL:0002677;1.56e-10;2!CL:0000625;2.13e-10;11!CL:0002328;2.71e-07;3!CL:0000542;5.82e-07;53!CL:0002076;7.02e-07;42 | ||
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|ontology_enrichment_development_v019=CL:0000790;3.41e-29;18!CL:0000377;9.61e-15;3!CL:0000051;5.82e-07;53 | |ontology_enrichment_development_v019=CL:0000790;3.41e-29;18!CL:0000377;9.61e-15;3!CL:0000051;5.82e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.43e-11;2!UBERON:0005058;2.43e-11;2!UBERON:0009113;2.43e-11;2!UBERON:0007196;1.13e-07;15!UBERON:0001558;1.13e-07;15!UBERON:0004815;2.71e-07;3!UBERON:0002031;2.71e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.43e-11;2!UBERON:0005058;2.43e-11;2!UBERON:0009113;2.43e-11;2!UBERON:0007196;1.13e-07;15!UBERON:0001558;1.13e-07;15!UBERON:0004815;2.71e-07;3!UBERON:0002031;2.71e-07;3 | ||
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| ||
|short_description=p8@DGKA | |short_description=p8@DGKA | ||
}} | }} |
Revision as of 08:48, 18 November 2012
Short description: | p8@DGKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_DGKA_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | -7bp_to_ENST00000555090_5end |
EntrezGene: | DGKA |
HGNC: | 2849 |
UniProt: | G3V4I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.76e-29 | 18 |
alpha-beta T cell | 3.76e-29 | 18 |
immature T cell | 3.76e-29 | 18 |
mature T cell | 3.76e-29 | 18 |
immature alpha-beta T cell | 3.76e-29 | 18 |
T cell | 1.29e-28 | 25 |
pro-T cell | 1.29e-28 | 25 |
CD4-positive, alpha-beta T cell | 1.20e-27 | 6 |
naive T cell | 3.74e-15 | 3 |
duct epithelial cell | 1.22e-14 | 3 |
branched duct epithelial cell | 1.22e-14 | 3 |
tracheal epithelial cell | 1.22e-14 | 3 |
tracheoblast | 1.22e-14 | 3 |
epithelial cell of tracheobronchial tree | 7.53e-13 | 9 |
epithelial cell of lower respiratory tract | 7.53e-13 | 9 |
respiratory epithelial cell | 1.32e-12 | 13 |
lymphoid lineage restricted progenitor cell | 2.51e-12 | 52 |
lymphocyte | 4.82e-12 | 53 |
common lymphoid progenitor | 4.82e-12 | 53 |
regulatory T cell | 1.01e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.01e-10 | 2 |
naive regulatory T cell | 1.01e-10 | 2 |
CD8-positive, alpha-beta T cell | 2.14e-10 | 11 |
endo-epithelial cell | 2.88e-09 | 42 |
bronchial epithelial cell | 3.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.12e-12 | 4 |
hemolymphoid system gland | 6.12e-12 | 4 |
thymic region | 6.12e-12 | 4 |
pharyngeal gland | 6.12e-12 | 4 |
thymus primordium | 6.12e-12 | 4 |
pharyngeal epithelium | 4.27e-08 | 6 |
neck | 4.68e-08 | 10 |
tracheobronchial tree | 1.33e-07 | 15 |
lower respiratory tract | 1.33e-07 | 15 |
lower respiratory tract epithelium | 3.28e-07 | 3 |
epithelium of bronchus | 3.28e-07 | 3 |
hemopoietic organ | 5.43e-07 | 7 |
immune organ | 5.43e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.