FFCP PHASE1:Hg19::chr2:5835715..5835720,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!1.30e-19!25;CL:0000133!1.13e-18!59;CL:0000221!2.95e-14!71;CL:0000333!1.14e-13!41;CL:0000055!3.98e-13!180;CL:0000095!8.13e-12!17;CL:0000123!8.13e-12!17;CL:0000243!6.35e-10!15;CL:0000125!6.35e-10!15;CL:0000030!6.35e-10!15;CL:0000339!6.35e-10!15;CL:0000047!9.32e-10!8;CL:0000128!8.46e-08!7;CL:0000126!8.46e-08!7;CL:0000127!8.46e-08!7;CL:0002453!8.46e-08!7;CL:0000540!1.15e-07!6;CL:0000031!1.15e-07!6;CL:0000404!1.15e-07!6;CL:0000147!6.06e-07!14 | |ontology_enrichment_celltype=CL:0002319!1.30e-19!25;CL:0000133!1.13e-18!59;CL:0000221!2.95e-14!71;CL:0000333!1.14e-13!41;CL:0000055!3.98e-13!180;CL:0000095!8.13e-12!17;CL:0000123!8.13e-12!17;CL:0000243!6.35e-10!15;CL:0000125!6.35e-10!15;CL:0000030!6.35e-10!15;CL:0000339!6.35e-10!15;CL:0000047!9.32e-10!8;CL:0000128!8.46e-08!7;CL:0000126!8.46e-08!7;CL:0000127!8.46e-08!7;CL:0002453!8.46e-08!7;CL:0000540!1.15e-07!6;CL:0000031!1.15e-07!6;CL:0000404!1.15e-07!6;CL:0000147!6.06e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.83e-29;25!CL:0002321;2.57e-16;15!CL:0000095;1.62e-14;17!CL:0000540;1.51e-13;6!CL:0000404;1.51e-13;6!CL:0000333;2.98e-12;5!CL:0000128;1.49e-11;7!CL:0000126;1.49e-11;7!CL:0000127;1.49e-11;7!CL:0000243;3.14e-11;15!CL:0000125;3.14e-11;15!CL:0002322;3.77e-11;5!CL:0002605;7.53e-08;3!CL:0002603;1.90e-07;3!CL:0000064;2.73e-07;3!CL:0000067;2.73e-07;3!CL:0005012;2.73e-07;3!CL:0002304;2.73e-07;3 | |ontology_enrichment_celltype_v019=CL:0002319;8.83e-29;25!CL:0002321;2.57e-16;15!CL:0000095;1.62e-14;17!CL:0000540;1.51e-13;6!CL:0000404;1.51e-13;6!CL:0000333;2.98e-12;5!CL:0000128;1.49e-11;7!CL:0000126;1.49e-11;7!CL:0000127;1.49e-11;7!CL:0000243;3.14e-11;15!CL:0000125;3.14e-11;15!CL:0002322;3.77e-11;5!CL:0002605;7.53e-08;3!CL:0002603;1.90e-07;3!CL:0000064;2.73e-07;3!CL:0000067;2.73e-07;3!CL:0005012;2.73e-07;3!CL:0002304;2.73e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.41e-29,59;CL:0002319,8.49e-29,25;CL:0000221,2.45e-24,72;CL:0000047,5.01e-18,8;CL:0000333,1.24e-17,41;CL:0000095,2.35e-14,17;CL:0000123,2.35e-14,17;CL:0000540,7.87e-14,6;CL:0000031,7.87e-14,6;CL:0000404,7.87e-14,6;CL:0000128,2.16e-11,7;CL:0000126,2.16e-11,7;CL:0000127,2.16e-11,7;CL:0002453,2.16e-11,7;CL:0002322,3.20e-11,5;CL:0000243,4.75e-11,15;CL:0000125,4.75e-11,15;CL:0000030,4.75e-11,15;CL:0000339,4.75e-11,15;CL:0002605,9.17e-08,3;CL:0000064,1.96e-07,3;CL:0000067,1.96e-07,3;CL:0005012,1.96e-07,3;CL:0002304,1.96e-07,3;CL:0002603,2.43e-07,3;CL:0002586,5.99e-07,3;CL:0002321,6.11e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;4.23e-14;59!CL:0000031;1.51e-13;6!CL:0000339;3.14e-11;15!CL:0000221;3.30e-09;72 | |ontology_enrichment_development_v019=CL:0000133;4.23e-14;59!CL:0000031;1.51e-13;6!CL:0000339;3.14e-11;15!CL:0000221;3.30e-09;72 | ||
|ontology_enrichment_disease=DOID:171!7.00e-09!10 | |ontology_enrichment_disease=DOID:171!7.00e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.53e-14;10!DOID:169;4.06e-10;6!DOID:3095;4.50e-07;22!DOID:2994;4.50e-07;22 | |ontology_enrichment_disease_v019=DOID:171;2.53e-14;10!DOID:169;4.06e-10;6!DOID:3095;4.50e-07;22!DOID:2994;4.50e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.18e-14,10;DOID:169,4.97e-10,6;DOID:3095,5.20e-07,22;DOID:2994,5.20e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.62e-28!94;UBERON:0001016!2.62e-28!94;UBERON:0000924!3.41e-26!173;UBERON:0006601!3.41e-26!173;UBERON:0005743!8.44e-25!86;UBERON:0004121!1.16e-23!169;UBERON:0001017!4.55e-23!82;UBERON:0002346!4.82e-17!90;UBERON:0000955!2.91e-15!69;UBERON:0006238!2.91e-15!69;UBERON:0000033!6.50e-15!123;UBERON:0003075!1.42e-14!86;UBERON:0007284!1.42e-14!86;UBERON:0000153!1.67e-14!129;UBERON:0007811!1.67e-14!129;UBERON:0000475!8.00e-12!365;UBERON:0003056!6.97e-11!61;UBERON:0000064!1.30e-10!219;UBERON:0002616!2.13e-09!59;UBERON:0007625!2.66e-09!11;UBERON:0001049!3.22e-09!57;UBERON:0005068!3.22e-09!57;UBERON:0006241!3.22e-09!57;UBERON:0007135!3.22e-09!57;UBERON:0000481!5.61e-09!347;UBERON:0002104!1.45e-08!21;UBERON:0000922!1.58e-08!612;UBERON:0001456!1.87e-08!21;UBERON:0000019!2.12e-08!19;UBERON:0000047!2.12e-08!19;UBERON:0004088!2.12e-08!19;UBERON:0003072!2.12e-08!19;UBERON:0003071!2.12e-08!19;UBERON:0004128!2.12e-08!19;UBERON:0000468!3.70e-08!659;UBERON:0000119!6.10e-08!312;UBERON:0001032!7.77e-08!24;UBERON:0004456!7.77e-08!24;UBERON:0000970!9.28e-08!20;UBERON:0002200!1.17e-07!11;UBERON:0006876!1.17e-07!11;UBERON:0000483!1.62e-07!309;UBERON:0000020!4.35e-07!23;UBERON:0002020!5.87e-07!34;UBERON:0003528!5.87e-07!34;UBERON:0001893!7.44e-07!34;UBERON:0000013!8.02e-07!5;UBERON:0002410!8.02e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!2.62e-28!94;UBERON:0001016!2.62e-28!94;UBERON:0000924!3.41e-26!173;UBERON:0006601!3.41e-26!173;UBERON:0005743!8.44e-25!86;UBERON:0004121!1.16e-23!169;UBERON:0001017!4.55e-23!82;UBERON:0002346!4.82e-17!90;UBERON:0000955!2.91e-15!69;UBERON:0006238!2.91e-15!69;UBERON:0000033!6.50e-15!123;UBERON:0003075!1.42e-14!86;UBERON:0007284!1.42e-14!86;UBERON:0000153!1.67e-14!129;UBERON:0007811!1.67e-14!129;UBERON:0000475!8.00e-12!365;UBERON:0003056!6.97e-11!61;UBERON:0000064!1.30e-10!219;UBERON:0002616!2.13e-09!59;UBERON:0007625!2.66e-09!11;UBERON:0001049!3.22e-09!57;UBERON:0005068!3.22e-09!57;UBERON:0006241!3.22e-09!57;UBERON:0007135!3.22e-09!57;UBERON:0000481!5.61e-09!347;UBERON:0002104!1.45e-08!21;UBERON:0000922!1.58e-08!612;UBERON:0001456!1.87e-08!21;UBERON:0000019!2.12e-08!19;UBERON:0000047!2.12e-08!19;UBERON:0004088!2.12e-08!19;UBERON:0003072!2.12e-08!19;UBERON:0003071!2.12e-08!19;UBERON:0004128!2.12e-08!19;UBERON:0000468!3.70e-08!659;UBERON:0000119!6.10e-08!312;UBERON:0001032!7.77e-08!24;UBERON:0004456!7.77e-08!24;UBERON:0000970!9.28e-08!20;UBERON:0002200!1.17e-07!11;UBERON:0006876!1.17e-07!11;UBERON:0000483!1.62e-07!309;UBERON:0000020!4.35e-07!23;UBERON:0002020!5.87e-07!34;UBERON:0003528!5.87e-07!34;UBERON:0001893!7.44e-07!34;UBERON:0000013!8.02e-07!5;UBERON:0002410!8.02e-07!5 | ||
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| ||
|short_description=p@chr2:5835715..5835720,+ | |short_description=p@chr2:5835715..5835720,+ | ||
}} | }} |
Revision as of 05:35, 20 November 2012
Short description: | p@chr2:5835715..5835720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:5835715..5835720, + |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.41e-29 | 59 |
neural cell | 8.49e-29 | 25 |
ectodermal cell | 2.45e-24 | 72 |
neuronal stem cell | 5.01e-18 | 8 |
migratory neural crest cell | 1.24e-17 | 41 |
neuron associated cell | 2.35e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 2.35e-14 | 17 |
neuron | 7.87e-14 | 6 |
neuroblast | 7.87e-14 | 6 |
electrically signaling cell | 7.87e-14 | 6 |
oligodendrocyte | 2.16e-11 | 7 |
macroglial cell | 2.16e-11 | 7 |
astrocyte | 2.16e-11 | 7 |
oligodendrocyte precursor cell | 2.16e-11 | 7 |
embryonic stem cell | 3.20e-11 | 5 |
glial cell (sensu Vertebrata) | 4.75e-11 | 15 |
glial cell | 4.75e-11 | 15 |
glioblast | 4.75e-11 | 15 |
glioblast (sensu Vertebrata) | 4.75e-11 | 15 |
astrocyte of the cerebral cortex | 9.17e-08 | 3 |
ciliated cell | 1.96e-07 | 3 |
ciliated epithelial cell | 1.96e-07 | 3 |
multi-ciliated epithelial cell | 1.96e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.96e-07 | 3 |
astrocyte of the cerebellum | 2.43e-07 | 3 |
retinal pigment epithelial cell | 5.99e-07 | 3 |
embryonic cell | 6.11e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.18e-14 | 10 |
neuroendocrine tumor | 4.97e-10 | 6 |
germ cell and embryonal cancer | 5.20e-07 | 22 |
germ cell cancer | 5.20e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.