FFCP PHASE1:Hg19::chr21:47406885..47406955,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.90e-44!180;CL:0000057!1.71e-23!75;CL:0000183!4.38e-20!59;CL:0000680!8.12e-20!57;CL:0000056!8.12e-20!57;CL:0000355!8.12e-20!57;CL:0000187!4.94e-19!54;CL:0000393!2.71e-18!60;CL:0000211!2.71e-18!60;CL:0000192!1.84e-14!42;CL:0000514!1.84e-14!42;CL:0000359!2.43e-11!32;CL:0002620!8.50e-09!23;CL:0000048!3.74e-07!430;CL:0000499!5.64e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.90e-44!180;CL:0000057!1.71e-23!75;CL:0000183!4.38e-20!59;CL:0000680!8.12e-20!57;CL:0000056!8.12e-20!57;CL:0000355!8.12e-20!57;CL:0000187!4.94e-19!54;CL:0000393!2.71e-18!60;CL:0000211!2.71e-18!60;CL:0000192!1.84e-14!42;CL:0000514!1.84e-14!42;CL:0000359!2.43e-11!32;CL:0002620!8.50e-09!23;CL:0000048!3.74e-07!430;CL:0000499!5.64e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.49e-12;43!CL:0000057;6.01e-12;73!CL:0000187;8.76e-12;55!CL:0002620;9.90e-12;23!CL:0000359;1.04e-10;32!CL:0000393;1.22e-10;61!CL:0000211;1.22e-10;61!CL:0000134;1.97e-09;55!CL:0002320;4.01e-09;188!CL:0000723;5.52e-09;61!CL:0000499;1.29e-08;28!CL:0002570;2.95e-08;8!CL:0002334;3.41e-08;12!CL:0000048;4.47e-08;58!CL:0000327;9.67e-07;15 | |ontology_enrichment_celltype_v019=CL:0000192;5.49e-12;43!CL:0000057;6.01e-12;73!CL:0000187;8.76e-12;55!CL:0002620;9.90e-12;23!CL:0000359;1.04e-10;32!CL:0000393;1.22e-10;61!CL:0000211;1.22e-10;61!CL:0000134;1.97e-09;55!CL:0002320;4.01e-09;188!CL:0000723;5.52e-09;61!CL:0000499;1.29e-08;28!CL:0002570;2.95e-08;8!CL:0002334;3.41e-08;12!CL:0000048;4.47e-08;58!CL:0000327;9.67e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.34e-29,76;CL:0000680,1.89e-22,58;CL:0000056,1.89e-22,58;CL:0000355,1.89e-22,58;CL:0000187,2.12e-21,55;CL:0000048,1.82e-19,427;CL:0000393,2.04e-18,61;CL:0000211,2.04e-18,61;CL:0000723,2.06e-18,433;CL:0000034,1.95e-17,441;CL:0000192,3.58e-16,43;CL:0000514,3.58e-16,43;CL:0000359,1.58e-11,32;CL:0002620,1.81e-11,23;CL:0002320,7.77e-09,361;CL:0000499,1.89e-08,28;CL:0002570,3.03e-08,8;CL:0002334,3.91e-08,12;CL:0000222,5.63e-07,121;CL:0000134,7.27e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;5.49e-12;43!CL:0000355;1.11e-11;58 | |ontology_enrichment_development_v019=CL:0000514;5.49e-12;43!CL:0000355;1.11e-11;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.32e-25!83;UBERON:0002329!4.32e-25!83;UBERON:0003077!4.32e-25!83;UBERON:0003059!4.32e-25!83;UBERON:0007282!4.32e-25!83;UBERON:0009618!4.32e-25!83;UBERON:0007285!4.32e-25!83;UBERON:0004290!6.06e-24!70;UBERON:0005256!5.39e-21!143;UBERON:0002385!9.06e-21!63;UBERON:0001015!9.06e-21!63;UBERON:0000383!9.06e-21!63;UBERON:0001134!2.26e-20!61;UBERON:0002036!2.26e-20!61;UBERON:0003082!2.26e-20!61;UBERON:0000486!2.42e-19!82;UBERON:0000475!9.67e-17!365;UBERON:0000481!5.19e-14!347;UBERON:0002100!9.27e-14!216;UBERON:0003102!1.01e-11!95;UBERON:0003104!2.18e-11!238;UBERON:0009142!2.18e-11!238;UBERON:0000468!4.83e-09!659;UBERON:0002199!1.90e-08!45;UBERON:0002416!1.90e-08!45;UBERON:0004573!7.32e-08!33;UBERON:0004571!7.32e-08!33;UBERON:0001013!9.75e-08!14;UBERON:0004872!2.63e-07!84;UBERON:0001637!3.89e-07!42;UBERON:0003509!3.89e-07!42;UBERON:0004572!3.89e-07!42;UBERON:0000490!4.23e-07!138;UBERON:0002097!5.44e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!4.32e-25!83;UBERON:0002329!4.32e-25!83;UBERON:0003077!4.32e-25!83;UBERON:0003059!4.32e-25!83;UBERON:0007282!4.32e-25!83;UBERON:0009618!4.32e-25!83;UBERON:0007285!4.32e-25!83;UBERON:0004290!6.06e-24!70;UBERON:0005256!5.39e-21!143;UBERON:0002385!9.06e-21!63;UBERON:0001015!9.06e-21!63;UBERON:0000383!9.06e-21!63;UBERON:0001134!2.26e-20!61;UBERON:0002036!2.26e-20!61;UBERON:0003082!2.26e-20!61;UBERON:0000486!2.42e-19!82;UBERON:0000475!9.67e-17!365;UBERON:0000481!5.19e-14!347;UBERON:0002100!9.27e-14!216;UBERON:0003102!1.01e-11!95;UBERON:0003104!2.18e-11!238;UBERON:0009142!2.18e-11!238;UBERON:0000468!4.83e-09!659;UBERON:0002199!1.90e-08!45;UBERON:0002416!1.90e-08!45;UBERON:0004573!7.32e-08!33;UBERON:0004571!7.32e-08!33;UBERON:0001013!9.75e-08!14;UBERON:0004872!2.63e-07!84;UBERON:0001637!3.89e-07!42;UBERON:0003509!3.89e-07!42;UBERON:0004572!3.89e-07!42;UBERON:0000490!4.23e-07!138;UBERON:0002097!5.44e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.53e-12;31!UBERON:0001015;6.53e-12;31!UBERON:0000383;6.53e-12;31!UBERON:0001013;3.95e-10;14!UBERON:0002384;6.83e-10;198!UBERON:0004573;1.71e-08;33!UBERON:0004571;1.71e-08;33!UBERON:0002199;8.40e-08;46!UBERON:0002416;8.40e-08;46!UBERON:0001134;9.17e-08;16!UBERON:0002036;9.17e-08;16!UBERON:0002204;1.80e-07;70!UBERON:0002097;5.67e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002385;6.53e-12;31!UBERON:0001015;6.53e-12;31!UBERON:0000383;6.53e-12;31!UBERON:0001013;3.95e-10;14!UBERON:0002384;6.83e-10;198!UBERON:0004573;1.71e-08;33!UBERON:0004571;1.71e-08;33!UBERON:0002199;8.40e-08;46!UBERON:0002416;8.40e-08;46!UBERON:0001134;9.17e-08;16!UBERON:0002036;9.17e-08;16!UBERON:0002204;1.80e-07;70!UBERON:0002097;5.67e-07;41 | ||
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| ||
|short_description=p2@COL6A1 | |short_description=p2@COL6A1 | ||
}} | }} |
Revision as of 08:05, 20 November 2012
Short description: | p2@COL6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COL6A1_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -67bp_to_ENST00000492851_5end |
EntrezGene: | COL6A1 |
HGNC: | 2211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.34e-29 | 76 |
muscle precursor cell | 1.89e-22 | 58 |
myoblast | 1.89e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.89e-22 | 58 |
muscle cell | 2.12e-21 | 55 |
multi fate stem cell | 1.82e-19 | 427 |
electrically responsive cell | 2.04e-18 | 61 |
electrically active cell | 2.04e-18 | 61 |
somatic stem cell | 2.06e-18 | 433 |
stem cell | 1.95e-17 | 441 |
smooth muscle cell | 3.58e-16 | 43 |
smooth muscle myoblast | 3.58e-16 | 43 |
vascular associated smooth muscle cell | 1.58e-11 | 32 |
skin fibroblast | 1.81e-11 | 23 |
connective tissue cell | 7.77e-09 | 361 |
stromal cell | 1.89e-08 | 28 |
mesenchymal stem cell of adipose | 3.03e-08 | 8 |
preadipocyte | 3.91e-08 | 12 |
mesodermal cell | 5.63e-07 | 121 |
mesenchymal cell | 7.27e-07 | 354 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.