FFCP PHASE1:Hg19::chr20:19955957..19956029,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.38e-09!180;CL:0000057!1.47e-09!75;CL:0002076!1.90e-09!43;CL:0000680!5.15e-09!57;CL:0000056!5.15e-09!57;CL:0000355!5.15e-09!57;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0002194!1.41e-08!63;CL:0000576!1.41e-08!63;CL:0000040!1.41e-08!63;CL:0000559!1.41e-08!63;CL:0000359!1.78e-08!32;CL:0000187!1.98e-08!54;CL:0002009!4.31e-08!65;CL:0000183!3.31e-07!59;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000220!7.18e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.38e-09!180;CL:0000057!1.47e-09!75;CL:0002076!1.90e-09!43;CL:0000680!5.15e-09!57;CL:0000056!5.15e-09!57;CL:0000355!5.15e-09!57;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0002194!1.41e-08!63;CL:0000576!1.41e-08!63;CL:0000040!1.41e-08!63;CL:0000559!1.41e-08!63;CL:0000359!1.78e-08!32;CL:0000187!1.98e-08!54;CL:0002009!4.31e-08!65;CL:0000183!3.31e-07!59;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000220!7.18e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.25e-08;39!CL:0000234;1.25e-08;39!CL:0000359;3.73e-08;32!CL:0002076;9.86e-07;42 | |ontology_enrichment_celltype_v019=CL:0000473;1.25e-08;39!CL:0000234;1.25e-08;39!CL:0000359;3.73e-08;32!CL:0002076;9.86e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.05e-10,59;CL:0000576,9.05e-10,59;CL:0000040,9.05e-10,59;CL:0000559,9.05e-10,59;CL:0000057,1.39e-09,76;CL:0000680,3.60e-09,58;CL:0000056,3.60e-09,58;CL:0000355,3.60e-09,58;CL:0002009,4.70e-09,61;CL:0000192,9.13e-09,43;CL:0000514,9.13e-09,43;CL:0000473,9.87e-09,48;CL:0000234,9.87e-09,48;CL:0002076,1.10e-08,42;CL:0000359,1.18e-08,32;CL:0000187,1.43e-08,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.06e-07!14 | |ontology_enrichment_disease=DOID:2394!2.06e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.38e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;1.38e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000467!4.72e-19!625;UBERON:0000468!4.81e-19!659;UBERON:0000480!6.29e-19!626;UBERON:0000923!1.54e-15!604;UBERON:0005291!1.54e-15!604;UBERON:0006598!1.54e-15!604;UBERON:0002532!1.54e-15!604;UBERON:0002050!2.06e-15!605;UBERON:0005423!2.06e-15!605;UBERON:0000062!3.48e-15!511;UBERON:0003102!4.34e-15!95;UBERON:0002204!7.68e-15!167;UBERON:0000926!1.87e-14!448;UBERON:0004120!1.87e-14!448;UBERON:0006603!1.87e-14!448;UBERON:0000922!1.02e-13!612;UBERON:0000486!1.14e-12!82;UBERON:0000914!1.38e-12!83;UBERON:0002329!1.38e-12!83;UBERON:0003077!1.38e-12!83;UBERON:0003059!1.38e-12!83;UBERON:0007282!1.38e-12!83;UBERON:0009618!1.38e-12!83;UBERON:0007285!1.38e-12!83;UBERON:0004290!4.46e-10!70;UBERON:0000475!1.51e-09!365;UBERON:0001134!2.05e-08!61;UBERON:0002036!2.05e-08!61;UBERON:0003082!2.05e-08!61;UBERON:0000161!4.06e-08!35;UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0000165!7.31e-08!28;UBERON:0000930!7.31e-08!28;UBERON:0005256!1.21e-07!143;UBERON:0002097!3.14e-07!40;UBERON:0000166!3.60e-07!21;UBERON:0002100!3.63e-07!216;UBERON:0002199!5.25e-07!45;UBERON:0002416!5.25e-07!45;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000481!9.00e-07!347 | |ontology_enrichment_uberon=UBERON:0000467!4.72e-19!625;UBERON:0000468!4.81e-19!659;UBERON:0000480!6.29e-19!626;UBERON:0000923!1.54e-15!604;UBERON:0005291!1.54e-15!604;UBERON:0006598!1.54e-15!604;UBERON:0002532!1.54e-15!604;UBERON:0002050!2.06e-15!605;UBERON:0005423!2.06e-15!605;UBERON:0000062!3.48e-15!511;UBERON:0003102!4.34e-15!95;UBERON:0002204!7.68e-15!167;UBERON:0000926!1.87e-14!448;UBERON:0004120!1.87e-14!448;UBERON:0006603!1.87e-14!448;UBERON:0000922!1.02e-13!612;UBERON:0000486!1.14e-12!82;UBERON:0000914!1.38e-12!83;UBERON:0002329!1.38e-12!83;UBERON:0003077!1.38e-12!83;UBERON:0003059!1.38e-12!83;UBERON:0007282!1.38e-12!83;UBERON:0009618!1.38e-12!83;UBERON:0007285!1.38e-12!83;UBERON:0004290!4.46e-10!70;UBERON:0000475!1.51e-09!365;UBERON:0001134!2.05e-08!61;UBERON:0002036!2.05e-08!61;UBERON:0003082!2.05e-08!61;UBERON:0000161!4.06e-08!35;UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0000165!7.31e-08!28;UBERON:0000930!7.31e-08!28;UBERON:0005256!1.21e-07!143;UBERON:0002097!3.14e-07!40;UBERON:0000166!3.60e-07!21;UBERON:0002100!3.63e-07!216;UBERON:0002199!5.25e-07!45;UBERON:0002416!5.25e-07!45;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000481!9.00e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.64e-08;28!UBERON:0000161;2.17e-07;19!UBERON:0000166;2.17e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000165;4.64e-08;28!UBERON:0000161;2.17e-07;19!UBERON:0000166;2.17e-07;19 | ||
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|phase1_expression=15.6243406172679,9.63452357509424,10.8534891153898,5.00366491765652,2.68176656656373,11.3404008133048,0,6.94891860769514,1.04474251279935,3.93174298402414,4.18680700783456,6.99012390816551,4.48403862988371,17.8223548262467,12.5931002776608,32.943932176137,39.7778388495825,40.8973650616929,39.0346239032406,0.738726348460727,1.22400414746552,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,5.11373559903575,4.98978217526377,10.217864138861,22.9855306119732,16.5663255328038,7.76483421350254,0,0,0,20.4978301156795,22.661522564126,7.59538047505481,124.497003677398,85.8318214950296,94.0150821864781,54.5243395423368,32.8752071009264,42.6947947690556,26.2644811703424,7.40102198439286,4.33588919253145,4.02769349251011,4.86705342405291,4.02019790810595,6.89491361473237,5.80936215225443,9.47985406160392,32.0011977222428,9.82462140208245,9.88783331558372,7.34601341690166,3.20929027076094,3.83602275479425,13.5239033076554,10.1726465387032,8.09827026012119,15.6712988859435,6.24123747160254,8.09668923694247,6.28121663141858,3.65038042894141,3.69221035998698,15.1349875658342,5.15588690382591,2.84816148696796,1.90129757680748,1.4882300997553,3.35453832813401,14.6027220490444,13.065389677211,13.0187725224635,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,3.36305137788922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,4.87613732627923,2.68280343881454,2.42938867502708,2.89151321907653,10.0267582127178,7.53201898596283,17.4962908351242,9.24606253575008,1.79616152611729,0.443458794925128,2.19586964232815,2.61958150995425,23.6791937390152,27.4380487660478,23.6919597367919,23.3333847981018,34.4361117743861,0.476981248610684,0,0,0.79504962946682,2.58070378531837,1.04142150482278,0,2.93649605346934,0.550236083880135,0.417989933073621,0,0.71153252537342,0,0.805658634218294,0,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,30.0904895978349,6.95760732373446,9.11739683984974,11.6520079115633,12.9076479336966,7.4480360261655,3.92474320099615,6.4049397437823,2.71334303258876,2.48968828319813,11.3156964538538,3.59616186849609,1.21085942115945,1.72852777344,1.17160715916898,29.9673673757108,14.2617955386112,17.4854956245607,1.87895197830024,2.10434827678571,3.08991774744947,13.0658669603132,6.75588745214724,7.33613046347935,11.8800285728205,7.41800787835671,4.55080680969013,1.43723628363248,3.53505839303539,2.37725187756732,10.8055005038831,6.14568669233173,5.21029252858333,11.7185685947146,3.17610112848059,10.404598869954,5.33893472046419,11.8681864649355,12.3037349394605,14.4273540933814,10.8209026819164,7.81690796592677,12.9957775825775,6.23596833031671,18.4276655198204,9.48113956015683,4.68773564774555,10.6502877754984,3.62707553619505,8.13890843090341,66.6749943413374,49.9125400681227,52.7720455515767,0,0,0,0,0,0,28.1609158193669,20.5837100221723,16.5761905622977,24.6115001856949,16.6032280784005,3.19428360107579,2.19160097101532,3.61516544825223,3.86028904563379,4.13970943775572,3.79632990577755,2.02246962240247,3.92442930250692,3.07797725557112,0,1.40241773803446,2.4694440679884,1.47008711385542,1.26755034821831,0,0,0,3.93563003337963,3.25978839567199,49.7168792901074,19.1082980537953,16.9893963375656,53.0531790758375,0.325808305310325,3.11980435583874,4.3299402607582,0.463721619900307,2.81780866165972,0.433099343283221,0.462985512576611,0,0,0,99.9641044714833,42.1207677250628,79.5176718244696,29.9948268757686,39.9797465113286,55.1505128272883,19.7028749946266,27.0289562817985,23.7697261082431,0,0,0,0.144119953416961,0.37872730027914,0.317489471460845,0,0,1.71072446022705,0.308482478109971,0,0,9.64327325370102,2.1798003441664,11.3674343022473,12.6686281442622,0,3.381211010224,9.0418959638856,3.12022310734098,3.60090323966999,1.41849132023278,4.26275486425759,2.85955987316295,3.25572963234866,4.11620168390384,6.5147236858747,1.42156779497018,3.16780749173372,27.7324226894819,35.7328718026121,23.4936529277834,66.8930793526548,91.410790640647,78.0085576087217,9.82461907515489,3.44585807502342,19.9691667057006,9.41078493339265,5.75333703141074,14.8620599489113,0,0.591092280605782,0,0.77005821767849,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,13.6187555808245,5.00170521059677,7.86668568729233,6.03115498439341,7.13715955188647,5.04647728108591,4.91993942969395,2.70851489754947,11.3703752027992,5.17365356462525,7.97070718242524,5.16233671916769,3.73599542212756,1.95801157462741,2.40200396667599,4.34212854858063,3.01999881146064,1.06727557803444,4.24378600024763,4.99306318531491,4.5358543999452,17.8637621629519,26.3954594055467,8.41980283299221,16.7862285524968,9.72243773226737,6.11244900345709,7.42090332224955,11.8741464228045,12.9620059478583,22.6670950598113,14.5391240171414,16.6180841197742,4.23008073570678,19.2486211491153,9.48434186039732,7.57775357886405,9.650831904356,5.11385218341754,3.15839729035188,4.1588282036384,0.78434976917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| ||
|short_description=p2@RIN2 | |short_description=p2@RIN2 | ||
}} | }} |
Revision as of 18:57, 20 November 2012
Short description: | p2@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_M37190_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.05e-10 | 59 |
monocyte | 9.05e-10 | 59 |
monoblast | 9.05e-10 | 59 |
promonocyte | 9.05e-10 | 59 |
fibroblast | 1.39e-09 | 76 |
muscle precursor cell | 3.60e-09 | 58 |
myoblast | 3.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.60e-09 | 58 |
macrophage dendritic cell progenitor | 4.70e-09 | 61 |
smooth muscle cell | 9.13e-09 | 43 |
smooth muscle myoblast | 9.13e-09 | 43 |
defensive cell | 9.87e-09 | 48 |
phagocyte | 9.87e-09 | 48 |
endo-epithelial cell | 1.10e-08 | 42 |
vascular associated smooth muscle cell | 1.18e-08 | 32 |
muscle cell | 1.43e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.