FFCP PHASE1:Hg19::chr10:71094364..71094378,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:71094364..71094378,+|id=chr10:71094364..71094378,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;4.09e-18;2!CL:0000558;4.09e-18;2!CL:0000039;3.02e-11;7!CL:0000586;3.02e-11;7|ontology_enrichment_celltype_v019_2=CL:0000764,4.46e-18,2;CL:0000765,4.46e-18,2;CL:0000050,4.46e-18,2;CL:0000038,4.46e-18,2;CL:0000558,4.46e-18,2;CL:0000547,4.46e-18,2;CL:0000549,4.46e-18,2;CL:0000550,4.46e-18,2;CL:0000552,4.46e-18,2;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0000039,2.67e-11,7;CL:0000586,2.67e-11,7;CL:0000988,1.22e-10,177;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168|ontology_enrichment_development_v019=UBERON:0010226;2.08e-09;1|ontology_enrichment_disease=DOID:1036!3.44e-16!8;DOID:8692!7.81e-10!31;DOID:1240!3.22e-07!39;DOID:2531!9.84e-07!51;DOID:0060083!9.84e-07!51|ontology_enrichment_disease_v019=DOID:1036;4.03e-51;8!DOID:8692;5.47e-30;31!DOID:1240;6.43e-20;39!DOID:2531;2.50e-12;51!DOID:0060083;2.50e-12;51!DOID:8552;8.53e-10;1|ontology_enrichment_disease_v019_2=DOID:1036,5.04e-51,8;DOID:8692,4.40e-31,31;DOID:1240,2.39e-24,39;DOID:2531,3.36e-18,51;DOID:0060083,3.36e-18,51;DOID:8552,8.91e-10,1;DOID:0050686,9.84e-07,137|ontology_enrichment_uberon=UBERON:0000478!3.63e-08!24;UBERON:0005631!2.55e-07!14;UBERON:0000158!2.55e-07!14|ontology_enrichment_uberon_v019=UBERON:0002084;2.08e-09;1!UBERON:0002082;2.08e-09;1!UBERON:0002331;5.92e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.08e-09,1;UBERON:0002082,2.08e-09,1;UBERON:0010226,2.08e-09,1;UBERON:0002331,6.52e-08,10;UBERON:0000358,6.52e-08,10;UBERON:0000307,6.52e-08,10;UBERON:0000091,6.52e-08,10;UBERON:0000087,6.52e-08,10;UBERON:0007010,6.52e-08,10;UBERON:0007806,6.52e-08,10;UBERON:0008780,6.52e-08,10;UBERON:0005728,6.52e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,8.77039506583738,5.49014447152291,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,16.497796387035,0,5.63948020351398,0.37428108081644,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99466151408956,2.2439411102443,1.84700532267414,0.31900115973192,0,0,0,1.2558420511602,3.49044531990328,10.8285917096247,11.3716269904289,12.2509758492365,18.9753732724185,3.97341447450947,0,0,0.141353071433941,0,0,0,0,1.18608451472249,2.71840665682306,2.19286093961456,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,2.13440553948281,0,0,0,1.32506888912221,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.61193297845189,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0.653150243690884,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr10:71094364..71094378,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:71094364..71094378,+ | |||
|id=chr10:71094364..71094378,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.09e-18;2!CL:0000558;4.09e-18;2!CL:0000039;3.02e-11;7!CL:0000586;3.02e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.46e-18,2;CL:0000765,4.46e-18,2;CL:0000050,4.46e-18,2;CL:0000038,4.46e-18,2;CL:0000558,4.46e-18,2;CL:0000547,4.46e-18,2;CL:0000549,4.46e-18,2;CL:0000550,4.46e-18,2;CL:0000552,4.46e-18,2;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0000039,2.67e-11,7;CL:0000586,2.67e-11,7;CL:0000988,1.22e-10,177;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.08e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!3.44e-16!8;DOID:8692!7.81e-10!31;DOID:1240!3.22e-07!39;DOID:2531!9.84e-07!51;DOID:0060083!9.84e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.03e-51;8!DOID:8692;5.47e-30;31!DOID:1240;6.43e-20;39!DOID:2531;2.50e-12;51!DOID:0060083;2.50e-12;51!DOID:8552;8.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.04e-51,8;DOID:8692,4.40e-31,31;DOID:1240,2.39e-24,39;DOID:2531,3.36e-18,51;DOID:0060083,3.36e-18,51;DOID:8552,8.91e-10,1;DOID:0050686,9.84e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000478!3.63e-08!24;UBERON:0005631!2.55e-07!14;UBERON:0000158!2.55e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.08e-09;1!UBERON:0002082;2.08e-09;1!UBERON:0002331;5.92e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.08e-09,1;UBERON:0002082,2.08e-09,1;UBERON:0010226,2.08e-09,1;UBERON:0002331,6.52e-08,10;UBERON:0000358,6.52e-08,10;UBERON:0000307,6.52e-08,10;UBERON:0000091,6.52e-08,10;UBERON:0000087,6.52e-08,10;UBERON:0007010,6.52e-08,10;UBERON:0007806,6.52e-08,10;UBERON:0008780,6.52e-08,10;UBERON:0005728,6.52e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,8.77039506583738,5.49014447152291,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,16.497796387035,0,5.63948020351398,0.37428108081644,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99466151408956,2.2439411102443,1.84700532267414,0.31900115973192,0,0,0,1.2558420511602,3.49044531990328,10.8285917096247,11.3716269904289,12.2509758492365,18.9753732724185,3.97341447450947,0,0,0.141353071433941,0,0,0,0,1.18608451472249,2.71840665682306,2.19286093961456,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,2.13440553948281,0,0,0,1.32506888912221,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.61193297845189,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0.653150243690884,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr10:71094364..71094378,+ | |||
}} |
Revision as of 14:08, 10 September 2013
Short description: | p@chr10:71094364..71094378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:71094364..71094378, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.46e-18 | 2 |
erythroblast | 4.46e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 4.46e-18 | 2 |
erythroid progenitor cell | 4.46e-18 | 2 |
reticulocyte | 4.46e-18 | 2 |
proerythroblast | 4.46e-18 | 2 |
basophilic erythroblast | 4.46e-18 | 2 |
polychromatophilic erythroblast | 4.46e-18 | 2 |
orthochromatic erythroblast | 4.46e-18 | 2 |
myeloid cell | 1.03e-12 | 108 |
common myeloid progenitor | 1.03e-12 | 108 |
germ line cell | 2.67e-11 | 7 |
germ cell | 2.67e-11 | 7 |
hematopoietic cell | 1.22e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-08 | 161 |
hematopoietic stem cell | 2.54e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.08e-09 | 1 |
cardiac ventricle | 2.08e-09 | 1 |
future cardiac ventricle | 2.08e-09 | 1 |
umbilical cord | 6.52e-08 | 10 |
blastocyst | 6.52e-08 | 10 |
blastula | 6.52e-08 | 10 |
bilaminar disc | 6.52e-08 | 10 |
inner cell mass | 6.52e-08 | 10 |
cleaving embryo | 6.52e-08 | 10 |
connecting stalk | 6.52e-08 | 10 |
inner cell mass derived epiblast | 6.52e-08 | 10 |
extraembryonic mesoderm | 6.52e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.04e-51 | 8 |
myeloid leukemia | 4.40e-31 | 31 |
leukemia | 2.39e-24 | 39 |
hematologic cancer | 3.36e-18 | 51 |
immune system cancer | 3.36e-18 | 51 |
chronic myeloid leukemia | 8.91e-10 | 1 |
organ system cancer | 9.84e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.