FFCP PHASE1:Hg19::chr11:60718808..60718854,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51296|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18068|TSSclassifier=W|UniProt=|association_with_transcript=402bp_to_NR_027391_5end|description=CAGE_peak_4_at_SLC15A3_5end|id=chr11:60718808..60718854,-|ontology_enrichment_celltype=CL:0000766!2.33e-46!76;CL:0002194!9.41e-42!63;CL:0000576!9.41e-42!63;CL:0000040!9.41e-42!63;CL:0000559!9.41e-42!63;CL:0002009!8.17e-40!65;CL:0002057!1.40e-39!42;CL:0000839!1.06e-36!70;CL:0000557!6.96e-36!71;CL:0000860!8.66e-36!45;CL:0000738!3.05e-31!140;CL:0000763!1.82e-28!112;CL:0000049!1.82e-28!112;CL:0002087!5.11e-26!119;CL:0002031!7.12e-22!124;CL:0000037!6.21e-21!172;CL:0000566!6.21e-21!172;CL:0002032!1.79e-20!165;CL:0000837!1.79e-20!165;CL:0000988!6.37e-19!182;CL:0002393!8.75e-11!9;CL:0002397!8.75e-11!9;CL:0000094!2.21e-09!8|ontology_enrichment_celltype_v019=CL:0000473;1.18e-44;39!CL:0000234;1.18e-44;39!CL:0000576;1.23e-39;48!CL:0000860;3.52e-38;33!CL:0002057;3.52e-38;33!CL:0000766;9.26e-33;69!CL:0000235;3.59e-18;6!CL:0002393;1.54e-17;6!CL:0002397;1.54e-17;6!CL:0000763;3.68e-17;100!CL:0000738;2.52e-14;136!CL:0000094;1.62e-12;8!CL:0000990;1.52e-11;8!CL:0002087;1.87e-11;104!CL:0000451;2.70e-09;10!CL:0002619;4.28e-09;3!CL:0000081;6.82e-09;11!CL:0000988;1.22e-07;177!CL:0000219;2.20e-07;193!CL:0000771;3.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0000766,3.04e-87,72;CL:0002194,1.79e-82,59;CL:0000576,1.79e-82,59;CL:0000040,1.79e-82,59;CL:0000559,1.79e-82,59;CL:0002009,2.02e-79,61;CL:0000473,1.23e-76,48;CL:0000234,1.23e-76,48;CL:0000839,1.38e-72,66;CL:0000557,2.43e-71,67;CL:0000763,6.61e-62,108;CL:0000049,6.61e-62,108;CL:0000860,1.41e-60,42;CL:0002057,1.41e-60,42;CL:0000738,1.20e-52,136;CL:0002087,9.27e-43,115;CL:0002032,2.40e-42,161;CL:0000837,2.40e-42,161;CL:0002031,1.79e-40,120;CL:0000037,5.21e-40,168;CL:0000988,2.83e-37,177;CL:0002393,1.76e-19,9;CL:0002397,1.76e-19,9;CL:0000235,3.88e-18,6;CL:0000134,8.77e-15,354;CL:0002320,3.20e-14,361;CL:0000094,1.48e-12,8;CL:0000219,3.03e-12,386;CL:0000990,1.27e-11,8;CL:0000048,1.62e-10,427;CL:0000723,3.57e-10,433;CL:0000034,9.86e-10,441;CL:0000451,2.33e-09,10;CL:0002619,2.45e-09,3;CL:0000081,6.40e-09,11;CL:0000771,3.36e-07,2|ontology_enrichment_development_v019=CL:0002057;4.39e-43;42!CL:0000049;1.96e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.71e-29!80;UBERON:0002390!2.50e-27!102;UBERON:0003061!2.50e-27!102;UBERON:0001474!5.20e-26!86;UBERON:0002193!1.45e-25!112;UBERON:0002405!6.10e-23!115;UBERON:0004765!8.05e-21!101;UBERON:0001434!8.05e-21!101;UBERON:0003081!8.05e-15!216;UBERON:0002204!2.10e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-61,76;UBERON:0001474,2.94e-56,82;UBERON:0004765,2.99e-50,90;UBERON:0002405,2.91e-48,93;UBERON:0002390,3.23e-45,98;UBERON:0003061,3.23e-45,98;UBERON:0001434,4.39e-44,100;UBERON:0002193,5.72e-40,108;UBERON:0002204,2.20e-24,167;UBERON:0003081,3.45e-21,203;UBERON:0002384,3.35e-14,371;UBERON:0000926,3.74e-12,315;UBERON:0004120,3.74e-12,315;UBERON:0006603,3.74e-12,315|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.61130724598361,0.410502947249729,0.550975469195755,1.57345710739562,0.767658796194425,2.16742572642506,0,0,0,0,0,0,3.87796785972314,4.8130667392834,4.34021741431704,1.79132379391939,6.80176698639857,2.83333124397605,2.03557534291391,0.755751887377619,1.94067248950253,3.71886459049095,5.75635043230556,3.71647645074124,0.575384784644301,1.5369642391746,2.12834006899727,2.06847408441971,3.22742341791913,0,2.44715041405386,2.72906150057846,2.24723484445085,3.06083892370903,4.8139354061414,2.55734850319616,1.31940520074686,0.997318288108159,0.426224750532694,3.77272010217159,5.10646702222026,3.11411124497787,0.251248665256743,1.0429658368404,0.868755378820466,1.21079900526674,4.78760926783834,2.53169909952708,2.32380814943136,4.46469029926591,3.35453832813401,0.561643155732475,0.750884464207532,1.44653028027372,1.42506371870624,2.18808344918999,0.91332076882317,0,0,0,0,0,0,0,0.954053754535364,0,0,2.29363936875137,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,6.49094787309367,8.70648686496336,10.9025527625469,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.609868530647977,0.530119073285941,0.232387885739037,0.518305275076852,0.504641701751257,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,1.23108503043699,14.9762729689112,9.36376322418988,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51296 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=402bp_to_NR_027391_5end | |||
|description=CAGE_peak_4_at_SLC15A3_5end | |||
|id=chr11:60718808..60718854,- | |||
|ontology_enrichment_celltype=CL:0000766!2.33e-46!76;CL:0002194!9.41e-42!63;CL:0000576!9.41e-42!63;CL:0000040!9.41e-42!63;CL:0000559!9.41e-42!63;CL:0002009!8.17e-40!65;CL:0002057!1.40e-39!42;CL:0000839!1.06e-36!70;CL:0000557!6.96e-36!71;CL:0000860!8.66e-36!45;CL:0000738!3.05e-31!140;CL:0000763!1.82e-28!112;CL:0000049!1.82e-28!112;CL:0002087!5.11e-26!119;CL:0002031!7.12e-22!124;CL:0000037!6.21e-21!172;CL:0000566!6.21e-21!172;CL:0002032!1.79e-20!165;CL:0000837!1.79e-20!165;CL:0000988!6.37e-19!182;CL:0002393!8.75e-11!9;CL:0002397!8.75e-11!9;CL:0000094!2.21e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.18e-44;39!CL:0000234;1.18e-44;39!CL:0000576;1.23e-39;48!CL:0000860;3.52e-38;33!CL:0002057;3.52e-38;33!CL:0000766;9.26e-33;69!CL:0000235;3.59e-18;6!CL:0002393;1.54e-17;6!CL:0002397;1.54e-17;6!CL:0000763;3.68e-17;100!CL:0000738;2.52e-14;136!CL:0000094;1.62e-12;8!CL:0000990;1.52e-11;8!CL:0002087;1.87e-11;104!CL:0000451;2.70e-09;10!CL:0002619;4.28e-09;3!CL:0000081;6.82e-09;11!CL:0000988;1.22e-07;177!CL:0000219;2.20e-07;193!CL:0000771;3.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.04e-87,72;CL:0002194,1.79e-82,59;CL:0000576,1.79e-82,59;CL:0000040,1.79e-82,59;CL:0000559,1.79e-82,59;CL:0002009,2.02e-79,61;CL:0000473,1.23e-76,48;CL:0000234,1.23e-76,48;CL:0000839,1.38e-72,66;CL:0000557,2.43e-71,67;CL:0000763,6.61e-62,108;CL:0000049,6.61e-62,108;CL:0000860,1.41e-60,42;CL:0002057,1.41e-60,42;CL:0000738,1.20e-52,136;CL:0002087,9.27e-43,115;CL:0002032,2.40e-42,161;CL:0000837,2.40e-42,161;CL:0002031,1.79e-40,120;CL:0000037,5.21e-40,168;CL:0000988,2.83e-37,177;CL:0002393,1.76e-19,9;CL:0002397,1.76e-19,9;CL:0000235,3.88e-18,6;CL:0000134,8.77e-15,354;CL:0002320,3.20e-14,361;CL:0000094,1.48e-12,8;CL:0000219,3.03e-12,386;CL:0000990,1.27e-11,8;CL:0000048,1.62e-10,427;CL:0000723,3.57e-10,433;CL:0000034,9.86e-10,441;CL:0000451,2.33e-09,10;CL:0002619,2.45e-09,3;CL:0000081,6.40e-09,11;CL:0000771,3.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-43;42!CL:0000049;1.96e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.71e-29!80;UBERON:0002390!2.50e-27!102;UBERON:0003061!2.50e-27!102;UBERON:0001474!5.20e-26!86;UBERON:0002193!1.45e-25!112;UBERON:0002405!6.10e-23!115;UBERON:0004765!8.05e-21!101;UBERON:0001434!8.05e-21!101;UBERON:0003081!8.05e-15!216;UBERON:0002204!2.10e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-61,76;UBERON:0001474,2.94e-56,82;UBERON:0004765,2.99e-50,90;UBERON:0002405,2.91e-48,93;UBERON:0002390,3.23e-45,98;UBERON:0003061,3.23e-45,98;UBERON:0001434,4.39e-44,100;UBERON:0002193,5.72e-40,108;UBERON:0002204,2.20e-24,167;UBERON:0003081,3.45e-21,203;UBERON:0002384,3.35e-14,371;UBERON:0000926,3.74e-12,315;UBERON:0004120,3.74e-12,315;UBERON:0006603,3.74e-12,315 | |||
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| |||
|short_description=p4@SLC15A3 | |||
}} |
Revision as of 18:20, 10 September 2013
Short description: | p4@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC15A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 402bp_to_NR_027391_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-61 | 76 |
bone element | 2.94e-56 | 82 |
skeletal element | 2.99e-50 | 90 |
immune system | 2.91e-48 | 93 |
hematopoietic system | 3.23e-45 | 98 |
blood island | 3.23e-45 | 98 |
skeletal system | 4.39e-44 | 100 |
hemolymphoid system | 5.72e-40 | 108 |
musculoskeletal system | 2.20e-24 | 167 |
lateral plate mesoderm | 3.45e-21 | 203 |
connective tissue | 3.35e-14 | 371 |
mesoderm | 3.74e-12 | 315 |
mesoderm-derived structure | 3.74e-12 | 315 |
presumptive mesoderm | 3.74e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.