FFCP PHASE1:Hg19::chr11:61124711..61124744,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23014|TSSclassifier=S|UniProt=|association_with_transcript=6bp_to_ENST00000536915_5end|description=CAGE_peak_8_at_CYBASC3_5end|id=chr11:61124711..61124744,-|ontology_enrichment_celltype=CL:0000738!7.25e-76!140;CL:0002087!3.25e-65!119;CL:0002031!2.09e-61!124;CL:0000037!2.05e-57!172;CL:0000566!2.05e-57!172;CL:0002009!3.86e-55!65;CL:0000988!1.64e-54!182;CL:0000557!1.72e-53!71;CL:0002194!5.64e-52!63;CL:0000576!5.64e-52!63;CL:0000040!5.64e-52!63;CL:0000559!5.64e-52!63;CL:0002032!1.23e-51!165;CL:0000837!1.23e-51!165;CL:0000766!4.94e-51!76;CL:0002057!6.21e-50!42;CL:0000839!1.79e-49!70;CL:0000860!8.43e-46!45;CL:0000763!2.94e-37!112;CL:0000049!2.94e-37!112;CL:0000945!4.12e-27!24;CL:0000826!4.12e-27!24;CL:0000134!2.00e-18!358;CL:0000236!3.08e-18!14;CL:0002320!1.24e-17!365;CL:0000219!7.45e-15!390;CL:0000034!8.80e-13!444;CL:0000048!1.03e-12!430;CL:0000451!1.86e-12!10;CL:0000542!1.98e-12!53;CL:0000051!1.98e-12!53;CL:0000723!3.13e-12!436;CL:0000838!1.60e-11!52;CL:0000990!5.65e-09!8;CL:0000453!1.13e-08!5;CL:0002393!1.40e-08!9;CL:0002397!1.40e-08!9;CL:0000784!1.80e-07!3;CL:0000235!4.31e-07!10|ontology_enrichment_celltype_v019=CL:0000473;2.40e-54;39!CL:0000234;2.40e-54;39!CL:0000860;2.09e-47;33!CL:0002057;2.09e-47;33!CL:0000236;2.30e-32;13!CL:0000945;4.73e-31;24!CL:0000576;8.65e-24;48!CL:0000766;2.46e-23;69!CL:0000235;4.32e-23;6!CL:0002087;1.65e-18;104!CL:0000738;8.14e-16;136!CL:0000784;3.12e-13;3!CL:0000763;3.57e-10;100!CL:0000988;3.39e-09;177!CL:0000542;8.29e-09;53!CL:0000219;3.29e-07;193|ontology_enrichment_celltype_v019_2=CL:0002087,1.25e-65,115;CL:0000738,3.83e-65,136;CL:0000473,1.14e-64,48;CL:0000234,1.14e-64,48;CL:0002031,1.26e-62,120;CL:0002009,1.17e-59,61;CL:0002194,6.09e-58,59;CL:0000576,6.09e-58,59;CL:0000040,6.09e-58,59;CL:0000559,6.09e-58,59;CL:0000557,1.15e-53,67;CL:0000839,4.79e-51,66;CL:0000037,7.60e-51,168;CL:0000766,3.00e-49,72;CL:0000988,9.51e-48,177;CL:0000860,2.53e-46,42;CL:0002057,2.53e-46,42;CL:0002032,2.60e-46,161;CL:0000837,2.60e-46,161;CL:0000763,1.89e-32,108;CL:0000049,1.89e-32,108;CL:0000945,3.50e-31,24;CL:0000826,3.50e-31,24;CL:0000236,4.70e-30,14;CL:0000235,3.25e-23,6;CL:0000134,1.13e-18,354;CL:0002320,4.18e-18,361;CL:0000219,4.20e-16,386;CL:0000034,1.02e-13,441;CL:0000048,1.19e-13,427;CL:0000723,2.59e-13,433;CL:0000784,3.12e-13,3;CL:0000838,1.66e-12,52;CL:0000542,3.31e-12,53;CL:0000051,3.31e-12,53|ontology_enrichment_development_v019=CL:0002057;3.92e-34;42!CL:0000049;4.60e-11;108!CL:0000051;8.29e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.88e-54!102;UBERON:0003061!3.88e-54!102;UBERON:0002193!1.74e-49!112;UBERON:0002371!9.42e-46!80;UBERON:0001474!2.62e-43!86;UBERON:0002405!3.25e-37!115;UBERON:0004765!1.40e-34!101;UBERON:0001434!1.40e-34!101;UBERON:0003081!1.19e-18!216;UBERON:0002204!7.37e-17!167;UBERON:0002384!1.49e-16!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.97e-46,76;UBERON:0001474,1.77e-42,82;UBERON:0002390,5.45e-39,98;UBERON:0003061,5.45e-39,98;UBERON:0002405,5.46e-39,93;UBERON:0004765,5.06e-38,90;UBERON:0002193,1.26e-34,108;UBERON:0001434,1.91e-33,100;UBERON:0002384,2.49e-17,371;UBERON:0002204,7.03e-17,167;UBERON:0003081,1.42e-14,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,2.52164238968239,1.64201178899891,2.04648031415566,0.393364276848904,1.15148819429164,0.928896739896456,0,0,0,0.232401601740905,0.142169232487422,0,0,1.20326668482085,0.868043482863407,0.223915474239924,2.91504299417082,0,0.145398238779565,1.13362783106643,0.727752183563449,4.41615170120801,4.11167888021826,5.57471467611186,1.7261543539329,0.768482119587302,1.18241114944293,2.41321976515633,5.80936215225443,6.77132432971709,2.25890807451126,2.72906150057846,4.49446968890169,1.83650335422542,5.77672248736969,5.11469700639233,0,0.598390972864896,1.27867425159808,5.22376629531451,10.2129340444405,8.71951148593805,0.251248665256743,0,0.217188844705117,4.84319602106695,8.83866326370155,7.59509729858123,0.211255286311942,1.06302149982522,0.419317291016752,0.22465726229299,0,0,0.285012743741249,0.19891667719909,0,1.75996244461323,2.73069305631066,4.44754626931777,3.41384178053206,4.00395987036012,2.87376219977242,3.30522436392431,1.90810750907073,1.70763890732835,4.11066032559657,1.14681968437569,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,39.5894436346868,33.1757048252474,24.1447375864217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,4.44608103764552,1.63494278517601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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=220002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000536915_5end | |||
|description=CAGE_peak_8_at_CYBASC3_5end | |||
|id=chr11:61124711..61124744,- | |||
|ontology_enrichment_celltype=CL:0000738!7.25e-76!140;CL:0002087!3.25e-65!119;CL:0002031!2.09e-61!124;CL:0000037!2.05e-57!172;CL:0000566!2.05e-57!172;CL:0002009!3.86e-55!65;CL:0000988!1.64e-54!182;CL:0000557!1.72e-53!71;CL:0002194!5.64e-52!63;CL:0000576!5.64e-52!63;CL:0000040!5.64e-52!63;CL:0000559!5.64e-52!63;CL:0002032!1.23e-51!165;CL:0000837!1.23e-51!165;CL:0000766!4.94e-51!76;CL:0002057!6.21e-50!42;CL:0000839!1.79e-49!70;CL:0000860!8.43e-46!45;CL:0000763!2.94e-37!112;CL:0000049!2.94e-37!112;CL:0000945!4.12e-27!24;CL:0000826!4.12e-27!24;CL:0000134!2.00e-18!358;CL:0000236!3.08e-18!14;CL:0002320!1.24e-17!365;CL:0000219!7.45e-15!390;CL:0000034!8.80e-13!444;CL:0000048!1.03e-12!430;CL:0000451!1.86e-12!10;CL:0000542!1.98e-12!53;CL:0000051!1.98e-12!53;CL:0000723!3.13e-12!436;CL:0000838!1.60e-11!52;CL:0000990!5.65e-09!8;CL:0000453!1.13e-08!5;CL:0002393!1.40e-08!9;CL:0002397!1.40e-08!9;CL:0000784!1.80e-07!3;CL:0000235!4.31e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.40e-54;39!CL:0000234;2.40e-54;39!CL:0000860;2.09e-47;33!CL:0002057;2.09e-47;33!CL:0000236;2.30e-32;13!CL:0000945;4.73e-31;24!CL:0000576;8.65e-24;48!CL:0000766;2.46e-23;69!CL:0000235;4.32e-23;6!CL:0002087;1.65e-18;104!CL:0000738;8.14e-16;136!CL:0000784;3.12e-13;3!CL:0000763;3.57e-10;100!CL:0000988;3.39e-09;177!CL:0000542;8.29e-09;53!CL:0000219;3.29e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.25e-65,115;CL:0000738,3.83e-65,136;CL:0000473,1.14e-64,48;CL:0000234,1.14e-64,48;CL:0002031,1.26e-62,120;CL:0002009,1.17e-59,61;CL:0002194,6.09e-58,59;CL:0000576,6.09e-58,59;CL:0000040,6.09e-58,59;CL:0000559,6.09e-58,59;CL:0000557,1.15e-53,67;CL:0000839,4.79e-51,66;CL:0000037,7.60e-51,168;CL:0000766,3.00e-49,72;CL:0000988,9.51e-48,177;CL:0000860,2.53e-46,42;CL:0002057,2.53e-46,42;CL:0002032,2.60e-46,161;CL:0000837,2.60e-46,161;CL:0000763,1.89e-32,108;CL:0000049,1.89e-32,108;CL:0000945,3.50e-31,24;CL:0000826,3.50e-31,24;CL:0000236,4.70e-30,14;CL:0000235,3.25e-23,6;CL:0000134,1.13e-18,354;CL:0002320,4.18e-18,361;CL:0000219,4.20e-16,386;CL:0000034,1.02e-13,441;CL:0000048,1.19e-13,427;CL:0000723,2.59e-13,433;CL:0000784,3.12e-13,3;CL:0000838,1.66e-12,52;CL:0000542,3.31e-12,53;CL:0000051,3.31e-12,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-34;42!CL:0000049;4.60e-11;108!CL:0000051;8.29e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.88e-54!102;UBERON:0003061!3.88e-54!102;UBERON:0002193!1.74e-49!112;UBERON:0002371!9.42e-46!80;UBERON:0001474!2.62e-43!86;UBERON:0002405!3.25e-37!115;UBERON:0004765!1.40e-34!101;UBERON:0001434!1.40e-34!101;UBERON:0003081!1.19e-18!216;UBERON:0002204!7.37e-17!167;UBERON:0002384!1.49e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.97e-46,76;UBERON:0001474,1.77e-42,82;UBERON:0002390,5.45e-39,98;UBERON:0003061,5.45e-39,98;UBERON:0002405,5.46e-39,93;UBERON:0004765,5.06e-38,90;UBERON:0002193,1.26e-34,108;UBERON:0001434,1.91e-33,100;UBERON:0002384,2.49e-17,371;UBERON:0002204,7.03e-17,167;UBERON:0003081,1.42e-14,203 | |||
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|short_description=p8@CYBASC3 | |||
}} |
Revision as of 18:22, 10 September 2013
Short description: | p8@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CYBASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000536915_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.97e-46 | 76 |
bone element | 1.77e-42 | 82 |
hematopoietic system | 5.45e-39 | 98 |
blood island | 5.45e-39 | 98 |
immune system | 5.46e-39 | 93 |
skeletal element | 5.06e-38 | 90 |
hemolymphoid system | 1.26e-34 | 108 |
skeletal system | 1.91e-33 | 100 |
connective tissue | 2.49e-17 | 371 |
musculoskeletal system | 7.03e-17 | 167 |
lateral plate mesoderm | 1.42e-14 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.