FFCP PHASE1:Hg19::chr12:120031564..120031599,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=387890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=37219|TSSclassifier=S|UniProt=B4DJY2|association_with_transcript=-119bp_to_ENST00000453450_5end|coexpression_cluster_id=C9|description=CAGE_peak_1_at_TMEM233_5end|id=chr12:120031564..120031599,+|ontology_enrichment_celltype=CL:0000680!4.41e-12!57;CL:0000056!4.41e-12!57;CL:0000355!4.41e-12!57;CL:0000183!3.07e-10!59;CL:0000187!3.55e-10!54;CL:0000222!3.78e-10!119;CL:0000055!7.08e-10!180;CL:0000393!2.06e-09!60;CL:0000211!2.06e-09!60;CL:0000188!1.30e-07!9|ontology_enrichment_celltype_v019=CL:0000188;2.25e-09;9!CL:0000680;1.54e-07;7!CL:0002570;1.72e-07;8!CL:0000056;2.25e-07;4|ontology_enrichment_celltype_v019_2=CL:0000680,2.07e-11,58;CL:0000056,2.07e-11,58;CL:0000355,2.07e-11,58;CL:0000188,2.75e-09,9;CL:0000187,5.46e-09,55;CL:0000222,6.90e-09,121;CL:0002570,1.38e-07,8;CL:0000393,1.96e-07,61;CL:0000211,1.96e-07,61;CL:0000515,2.23e-07,4|ontology_enrichment_development_v019=CL:0000515;2.25e-07;4!CL:0000355;2.47e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;8.60e-08;14|ontology_enrichment_disease_v019_2=DOID:2394,8.58e-08,14|ontology_enrichment_uberon=UBERON:0004290!7.19e-16!70;UBERON:0000483!8.48e-16!309;UBERON:0002385!3.27e-15!63;UBERON:0001015!3.27e-15!63;UBERON:0000383!3.27e-15!63;UBERON:0000119!3.27e-15!312;UBERON:0001134!1.16e-14!61;UBERON:0002036!1.16e-14!61;UBERON:0003082!1.16e-14!61;UBERON:0007023!1.58e-13!115;UBERON:0004872!1.27e-12!84;UBERON:0000914!1.61e-12!83;UBERON:0002329!1.61e-12!83;UBERON:0003077!1.61e-12!83;UBERON:0003059!1.61e-12!83;UBERON:0007282!1.61e-12!83;UBERON:0009618!1.61e-12!83;UBERON:0007285!1.61e-12!83;UBERON:0000486!4.14e-12!82;UBERON:0000055!4.36e-12!69;UBERON:0001981!7.16e-12!60;UBERON:0007500!7.16e-12!60;UBERON:0004537!7.16e-12!60;UBERON:0006965!7.16e-12!60;UBERON:0000025!1.06e-11!194;UBERON:0002049!6.14e-11!79;UBERON:0007798!6.14e-11!79;UBERON:0001637!7.26e-11!42;UBERON:0003509!7.26e-11!42;UBERON:0004572!7.26e-11!42;UBERON:0004111!4.15e-10!241;UBERON:0000477!1.18e-09!286;UBERON:0003914!1.51e-09!118;UBERON:0001009!2.42e-09!113;UBERON:0004573!2.63e-09!33;UBERON:0004571!2.63e-09!33;UBERON:0004535!3.79e-09!110;UBERON:0000948!2.05e-08!24;UBERON:0005498!2.05e-08!24;UBERON:0004140!2.05e-08!24;UBERON:0009881!2.05e-08!24;UBERON:0004141!2.05e-08!24;UBERON:0003084!2.05e-08!24;UBERON:0007005!2.05e-08!24;UBERON:0004139!2.05e-08!24;UBERON:0004291!2.05e-08!24;UBERON:0007100!2.43e-08!27;UBERON:0000490!3.97e-08!138;UBERON:0000481!8.26e-08!347;UBERON:0005256!8.40e-08!143;UBERON:0000475!9.57e-08!365;UBERON:0003103!2.93e-07!69;UBERON:0000468!8.26e-07!659|ontology_enrichment_uberon_v019=UBERON:0001134;9.06e-19;16!UBERON:0002036;9.06e-19;16!UBERON:0002385;4.53e-18;31!UBERON:0001015;4.53e-18;31!UBERON:0000383;4.53e-18;31!UBERON:0001637;4.17e-09;42!UBERON:0003509;4.17e-09;42!UBERON:0004572;4.17e-09;42!UBERON:0000948;4.22e-09;22!UBERON:0007100;1.20e-08;25!UBERON:0004573;2.04e-08;33!UBERON:0004571;2.04e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0003077,1.08e-15,72;UBERON:0007285,1.08e-15,72;UBERON:0007524,2.56e-15,73;UBERON:0002329,5.29e-15,71;UBERON:0003059,5.29e-15,71;UBERON:0007282,5.29e-15,71;UBERON:0004290,5.29e-15,71;UBERON:0009618,5.29e-15,71;UBERON:0001134,8.07e-15,62;UBERON:0002036,8.07e-15,62;UBERON:0003082,8.07e-15,62;UBERON:0007503,1.28e-14,78;UBERON:0002385,4.87e-14,64;UBERON:0001015,4.87e-14,64;UBERON:0000383,4.87e-14,64;UBERON:0004872,7.73e-13,83;UBERON:0000055,1.09e-11,68;UBERON:0000483,1.16e-11,306;UBERON:0007500,1.26e-11,59;UBERON:0001981,1.26e-11,59;UBERON:0004537,1.26e-11,59;UBERON:0006965,1.26e-11,59;UBERON:0001637,1.58e-11,42;UBERON:0003509,1.58e-11,42;UBERON:0004572,1.58e-11,42;UBERON:0000119,2.53e-11,309;UBERON:0000486,2.81e-11,83;UBERON:0000948,1.12e-10,24;UBERON:0005498,1.12e-10,24;UBERON:0004140,1.12e-10,24;UBERON:0009881,1.12e-10,24;UBERON:0004141,1.12e-10,24;UBERON:0003084,1.12e-10,24;UBERON:0007005,1.12e-10,24;UBERON:0004139,1.12e-10,24;UBERON:0004291,1.12e-10,24;UBERON:0007100,3.90e-10,27;UBERON:0000490,7.65e-10,148;UBERON:0002049,1.07e-09,78;UBERON:0007798,1.07e-09,78;UBERON:0003914,1.59e-09,117;UBERON:0004573,2.42e-09,33;UBERON:0004571,2.42e-09,33;UBERON:0001009,2.84e-09,112;UBERON:0004535,3.09e-09,109;UBERON:0005256,5.82e-09,122;UBERON:0003104,5.57e-08,160;UBERON:0009142,5.57e-08,160;UBERON:0000926,1.16e-07,315;UBERON:0004120,1.16e-07,315;UBERON:0006603,1.16e-07,315;UBERON:0000025,1.29e-07,192;UBERON:0010314,3.31e-07,132|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,5.68547886084148,0,0.491467873003018,0,0,0,0,0,4.70627602516243,2.41077811209591,3.65155045193687,3.41552959153355,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.25572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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=387890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37219 | |||
|TSSclassifier=S | |||
|UniProt=B4DJY2 | |||
|association_with_transcript=-119bp_to_ENST00000453450_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_TMEM233_5end | |||
|id=chr12:120031564..120031599,+ | |||
|ontology_enrichment_celltype=CL:0000680!4.41e-12!57;CL:0000056!4.41e-12!57;CL:0000355!4.41e-12!57;CL:0000183!3.07e-10!59;CL:0000187!3.55e-10!54;CL:0000222!3.78e-10!119;CL:0000055!7.08e-10!180;CL:0000393!2.06e-09!60;CL:0000211!2.06e-09!60;CL:0000188!1.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.25e-09;9!CL:0000680;1.54e-07;7!CL:0002570;1.72e-07;8!CL:0000056;2.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.07e-11,58;CL:0000056,2.07e-11,58;CL:0000355,2.07e-11,58;CL:0000188,2.75e-09,9;CL:0000187,5.46e-09,55;CL:0000222,6.90e-09,121;CL:0002570,1.38e-07,8;CL:0000393,1.96e-07,61;CL:0000211,1.96e-07,61;CL:0000515,2.23e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.25e-07;4!CL:0000355;2.47e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.60e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!7.19e-16!70;UBERON:0000483!8.48e-16!309;UBERON:0002385!3.27e-15!63;UBERON:0001015!3.27e-15!63;UBERON:0000383!3.27e-15!63;UBERON:0000119!3.27e-15!312;UBERON:0001134!1.16e-14!61;UBERON:0002036!1.16e-14!61;UBERON:0003082!1.16e-14!61;UBERON:0007023!1.58e-13!115;UBERON:0004872!1.27e-12!84;UBERON:0000914!1.61e-12!83;UBERON:0002329!1.61e-12!83;UBERON:0003077!1.61e-12!83;UBERON:0003059!1.61e-12!83;UBERON:0007282!1.61e-12!83;UBERON:0009618!1.61e-12!83;UBERON:0007285!1.61e-12!83;UBERON:0000486!4.14e-12!82;UBERON:0000055!4.36e-12!69;UBERON:0001981!7.16e-12!60;UBERON:0007500!7.16e-12!60;UBERON:0004537!7.16e-12!60;UBERON:0006965!7.16e-12!60;UBERON:0000025!1.06e-11!194;UBERON:0002049!6.14e-11!79;UBERON:0007798!6.14e-11!79;UBERON:0001637!7.26e-11!42;UBERON:0003509!7.26e-11!42;UBERON:0004572!7.26e-11!42;UBERON:0004111!4.15e-10!241;UBERON:0000477!1.18e-09!286;UBERON:0003914!1.51e-09!118;UBERON:0001009!2.42e-09!113;UBERON:0004573!2.63e-09!33;UBERON:0004571!2.63e-09!33;UBERON:0004535!3.79e-09!110;UBERON:0000948!2.05e-08!24;UBERON:0005498!2.05e-08!24;UBERON:0004140!2.05e-08!24;UBERON:0009881!2.05e-08!24;UBERON:0004141!2.05e-08!24;UBERON:0003084!2.05e-08!24;UBERON:0007005!2.05e-08!24;UBERON:0004139!2.05e-08!24;UBERON:0004291!2.05e-08!24;UBERON:0007100!2.43e-08!27;UBERON:0000490!3.97e-08!138;UBERON:0000481!8.26e-08!347;UBERON:0005256!8.40e-08!143;UBERON:0000475!9.57e-08!365;UBERON:0003103!2.93e-07!69;UBERON:0000468!8.26e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.06e-19;16!UBERON:0002036;9.06e-19;16!UBERON:0002385;4.53e-18;31!UBERON:0001015;4.53e-18;31!UBERON:0000383;4.53e-18;31!UBERON:0001637;4.17e-09;42!UBERON:0003509;4.17e-09;42!UBERON:0004572;4.17e-09;42!UBERON:0000948;4.22e-09;22!UBERON:0007100;1.20e-08;25!UBERON:0004573;2.04e-08;33!UBERON:0004571;2.04e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003077,1.08e-15,72;UBERON:0007285,1.08e-15,72;UBERON:0007524,2.56e-15,73;UBERON:0002329,5.29e-15,71;UBERON:0003059,5.29e-15,71;UBERON:0007282,5.29e-15,71;UBERON:0004290,5.29e-15,71;UBERON:0009618,5.29e-15,71;UBERON:0001134,8.07e-15,62;UBERON:0002036,8.07e-15,62;UBERON:0003082,8.07e-15,62;UBERON:0007503,1.28e-14,78;UBERON:0002385,4.87e-14,64;UBERON:0001015,4.87e-14,64;UBERON:0000383,4.87e-14,64;UBERON:0004872,7.73e-13,83;UBERON:0000055,1.09e-11,68;UBERON:0000483,1.16e-11,306;UBERON:0007500,1.26e-11,59;UBERON:0001981,1.26e-11,59;UBERON:0004537,1.26e-11,59;UBERON:0006965,1.26e-11,59;UBERON:0001637,1.58e-11,42;UBERON:0003509,1.58e-11,42;UBERON:0004572,1.58e-11,42;UBERON:0000119,2.53e-11,309;UBERON:0000486,2.81e-11,83;UBERON:0000948,1.12e-10,24;UBERON:0005498,1.12e-10,24;UBERON:0004140,1.12e-10,24;UBERON:0009881,1.12e-10,24;UBERON:0004141,1.12e-10,24;UBERON:0003084,1.12e-10,24;UBERON:0007005,1.12e-10,24;UBERON:0004139,1.12e-10,24;UBERON:0004291,1.12e-10,24;UBERON:0007100,3.90e-10,27;UBERON:0000490,7.65e-10,148;UBERON:0002049,1.07e-09,78;UBERON:0007798,1.07e-09,78;UBERON:0003914,1.59e-09,117;UBERON:0004573,2.42e-09,33;UBERON:0004571,2.42e-09,33;UBERON:0001009,2.84e-09,112;UBERON:0004535,3.09e-09,109;UBERON:0005256,5.82e-09,122;UBERON:0003104,5.57e-08,160;UBERON:0009142,5.57e-08,160;UBERON:0000926,1.16e-07,315;UBERON:0004120,1.16e-07,315;UBERON:0006603,1.16e-07,315;UBERON:0000025,1.29e-07,192;UBERON:0010314,3.31e-07,132 | |||
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| |||
|short_description=p1@TMEM233 | |||
}} |
Revision as of 21:13, 10 September 2013
Short description: | p1@TMEM233 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM233_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -119bp_to_ENST00000453450_5end |
EntrezGene: | TMEM233 |
HGNC: | 37219 |
UniProt: | B4DJY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.07e-11 | 58 |
myoblast | 2.07e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-11 | 58 |
cell of skeletal muscle | 2.75e-09 | 9 |
muscle cell | 5.46e-09 | 55 |
mesodermal cell | 6.90e-09 | 121 |
mesenchymal stem cell of adipose | 1.38e-07 | 8 |
electrically responsive cell | 1.96e-07 | 61 |
electrically active cell | 1.96e-07 | 61 |
skeletal muscle myoblast | 2.23e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.58e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.