FFCP PHASE1:Hg19::chr12:25056445..25056462,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=976|TSSclassifier=S|UniProt=F5H5E4,B7Z2M5,P54687|association_with_transcript=-436bp_to_ENST00000539282,NM_001178093_5end|coexpression_cluster_id=C0|description=CAGE_peak_12_at_BCAT1_5end|id=chr12:25056445..25056462,-|ontology_enrichment_celltype=CL:0002057!7.34e-37!42;CL:0002194!2.34e-35!63;CL:0000576!2.34e-35!63;CL:0000040!2.34e-35!63;CL:0000559!2.34e-35!63;CL:0000766!1.89e-34!76;CL:0002009!1.15e-33!65;CL:0000860!2.69e-33!45;CL:0000839!4.91e-31!70;CL:0000557!2.53e-30!71;CL:0000763!1.57e-17!112;CL:0000049!1.57e-17!112;CL:0002087!1.27e-14!119;CL:0000738!9.39e-14!140;CL:0002031!1.82e-12!124;CL:0002032!2.58e-08!165;CL:0000837!2.58e-08!165;CL:0000037!2.91e-08!172;CL:0000566!2.91e-08!172;CL:0000988!2.64e-07!182|ontology_enrichment_celltype_v019=CL:0000860;2.22e-82;33!CL:0002057;2.22e-82;33!CL:0000473;2.56e-62;39!CL:0000234;2.56e-62;39!CL:0000576;6.92e-45;48!CL:0000766;3.57e-29;69!CL:0000763;1.70e-12;100!CL:0002087;2.27e-10;104!CL:0000738;3.89e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.09e-84,42;CL:0002057,8.09e-84,42;CL:0000473,8.30e-82,48;CL:0000234,8.30e-82,48;CL:0002194,1.08e-63,59;CL:0000576,1.08e-63,59;CL:0000040,1.08e-63,59;CL:0000559,1.08e-63,59;CL:0002009,2.35e-61,61;CL:0000766,3.35e-57,72;CL:0000839,4.02e-56,66;CL:0000557,3.62e-55,67;CL:0000763,2.63e-35,108;CL:0000049,2.63e-35,108;CL:0002087,9.78e-29,115;CL:0002031,3.42e-27,120;CL:0000738,3.03e-26,136;CL:0002032,8.15e-21,161;CL:0000837,8.15e-21,161;CL:0000037,1.39e-19,168;CL:0000988,3.80e-18,177|ontology_enrichment_development_v019=CL:0002057;3.63e-61;42!CL:0000049;2.29e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.49e-29!80;UBERON:0001474!2.42e-25!86;UBERON:0004765!2.05e-24!101;UBERON:0001434!2.05e-24!101;UBERON:0002193!1.06e-21!112;UBERON:0002390!5.31e-21!102;UBERON:0003061!5.31e-21!102;UBERON:0002405!1.68e-20!115;UBERON:0001049!3.55e-18!57;UBERON:0005068!3.55e-18!57;UBERON:0006241!3.55e-18!57;UBERON:0007135!3.55e-18!57;UBERON:0002780!4.98e-18!41;UBERON:0001890!4.98e-18!41;UBERON:0006240!4.98e-18!41;UBERON:0003080!2.40e-17!42;UBERON:0002616!4.65e-17!59;UBERON:0001869!6.71e-16!32;UBERON:0002020!1.05e-15!34;UBERON:0003528!1.05e-15!34;UBERON:0001893!1.38e-15!34;UBERON:0001950!5.06e-15!20;UBERON:0002791!9.07e-15!33;UBERON:0000073!1.65e-14!94;UBERON:0001016!1.65e-14!94;UBERON:0000955!2.29e-14!69;UBERON:0006238!2.29e-14!69;UBERON:0005743!4.86e-14!86;UBERON:0001017!9.01e-14!82;UBERON:0002204!9.89e-14!167;UBERON:0002619!3.86e-13!22;UBERON:0000956!5.66e-12!25;UBERON:0000203!5.66e-12!25;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0003056!2.22e-10!61;UBERON:0002346!1.89e-09!90;UBERON:0003081!6.89e-09!216;UBERON:0000468!1.38e-08!659;UBERON:0000467!5.02e-08!625;UBERON:0000480!6.10e-08!626;UBERON:0000922!9.75e-08!612;UBERON:0000033!6.42e-07!123|ontology_enrichment_uberon_v019=UBERON:0000007;1.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.01e-54,76;UBERON:0001474,2.84e-49,82;UBERON:0004765,3.85e-44,90;UBERON:0002405,1.92e-42,93;UBERON:0002390,7.71e-40,98;UBERON:0003061,7.71e-40,98;UBERON:0001434,7.17e-39,100;UBERON:0002193,2.37e-35,108;UBERON:0002204,8.79e-20,167;UBERON:0003081,4.21e-18,203;UBERON:0000926,5.76e-10,315;UBERON:0004120,5.76e-10,315;UBERON:0006603,5.76e-10,315;UBERON:0000007,7.10e-08,2;UBERON:0000923,1.80e-07,560;UBERON:0010316,1.80e-07,560;UBERON:0005291,1.80e-07,560;UBERON:0006598,1.80e-07,560;UBERON:0010317,1.80e-07,560;UBERON:0002532,1.80e-07,560;UBERON:0002050,2.46e-07,564;UBERON:0005423,8.81e-07,581|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.786728553697808,1.15148819429164,1.39334510984468,0,0,0,0,0,0,4.43196326825502,5.01361118675354,2.38711957787437,0.223915474239924,0.32389366601898,0.515151135268373,1.59938062657521,3.02300754951048,2.42584061187816,4.18372266430232,6.98985409637104,7.74265927237759,1.7261543539329,4.86705342405291,6.85798466676897,5.17118521104928,9.68227025375739,10.8341189275473,1.69418105588344,4.09359225086769,4.26974620445661,6.73384563215986,11.2325159476633,7.67204550958849,0.329851300186716,1.59570926097305,1.70489900213078,4.06292934080018,6.80862269629368,7.4738669879469,2.26123798731069,7.30076085788282,6.29847649644838,4.23779651843358,13.6262725315399,6.96217252369946,0,0.425208599930087,0.209658645508376,0.786300418025466,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,1.22031028774085,0,0,0.0892997282840798,0.44905874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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=S | |||
|UniProt=F5H5E4,B7Z2M5,P54687 | |||
|association_with_transcript=-436bp_to_ENST00000539282,NM_001178093_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_BCAT1_5end | |||
|id=chr12:25056445..25056462,- | |||
|ontology_enrichment_celltype=CL:0002057!7.34e-37!42;CL:0002194!2.34e-35!63;CL:0000576!2.34e-35!63;CL:0000040!2.34e-35!63;CL:0000559!2.34e-35!63;CL:0000766!1.89e-34!76;CL:0002009!1.15e-33!65;CL:0000860!2.69e-33!45;CL:0000839!4.91e-31!70;CL:0000557!2.53e-30!71;CL:0000763!1.57e-17!112;CL:0000049!1.57e-17!112;CL:0002087!1.27e-14!119;CL:0000738!9.39e-14!140;CL:0002031!1.82e-12!124;CL:0002032!2.58e-08!165;CL:0000837!2.58e-08!165;CL:0000037!2.91e-08!172;CL:0000566!2.91e-08!172;CL:0000988!2.64e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-82;33!CL:0002057;2.22e-82;33!CL:0000473;2.56e-62;39!CL:0000234;2.56e-62;39!CL:0000576;6.92e-45;48!CL:0000766;3.57e-29;69!CL:0000763;1.70e-12;100!CL:0002087;2.27e-10;104!CL:0000738;3.89e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.09e-84,42;CL:0002057,8.09e-84,42;CL:0000473,8.30e-82,48;CL:0000234,8.30e-82,48;CL:0002194,1.08e-63,59;CL:0000576,1.08e-63,59;CL:0000040,1.08e-63,59;CL:0000559,1.08e-63,59;CL:0002009,2.35e-61,61;CL:0000766,3.35e-57,72;CL:0000839,4.02e-56,66;CL:0000557,3.62e-55,67;CL:0000763,2.63e-35,108;CL:0000049,2.63e-35,108;CL:0002087,9.78e-29,115;CL:0002031,3.42e-27,120;CL:0000738,3.03e-26,136;CL:0002032,8.15e-21,161;CL:0000837,8.15e-21,161;CL:0000037,1.39e-19,168;CL:0000988,3.80e-18,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-61;42!CL:0000049;2.29e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.49e-29!80;UBERON:0001474!2.42e-25!86;UBERON:0004765!2.05e-24!101;UBERON:0001434!2.05e-24!101;UBERON:0002193!1.06e-21!112;UBERON:0002390!5.31e-21!102;UBERON:0003061!5.31e-21!102;UBERON:0002405!1.68e-20!115;UBERON:0001049!3.55e-18!57;UBERON:0005068!3.55e-18!57;UBERON:0006241!3.55e-18!57;UBERON:0007135!3.55e-18!57;UBERON:0002780!4.98e-18!41;UBERON:0001890!4.98e-18!41;UBERON:0006240!4.98e-18!41;UBERON:0003080!2.40e-17!42;UBERON:0002616!4.65e-17!59;UBERON:0001869!6.71e-16!32;UBERON:0002020!1.05e-15!34;UBERON:0003528!1.05e-15!34;UBERON:0001893!1.38e-15!34;UBERON:0001950!5.06e-15!20;UBERON:0002791!9.07e-15!33;UBERON:0000073!1.65e-14!94;UBERON:0001016!1.65e-14!94;UBERON:0000955!2.29e-14!69;UBERON:0006238!2.29e-14!69;UBERON:0005743!4.86e-14!86;UBERON:0001017!9.01e-14!82;UBERON:0002204!9.89e-14!167;UBERON:0002619!3.86e-13!22;UBERON:0000956!5.66e-12!25;UBERON:0000203!5.66e-12!25;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0003056!2.22e-10!61;UBERON:0002346!1.89e-09!90;UBERON:0003081!6.89e-09!216;UBERON:0000468!1.38e-08!659;UBERON:0000467!5.02e-08!625;UBERON:0000480!6.10e-08!626;UBERON:0000922!9.75e-08!612;UBERON:0000033!6.42e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.01e-54,76;UBERON:0001474,2.84e-49,82;UBERON:0004765,3.85e-44,90;UBERON:0002405,1.92e-42,93;UBERON:0002390,7.71e-40,98;UBERON:0003061,7.71e-40,98;UBERON:0001434,7.17e-39,100;UBERON:0002193,2.37e-35,108;UBERON:0002204,8.79e-20,167;UBERON:0003081,4.21e-18,203;UBERON:0000926,5.76e-10,315;UBERON:0004120,5.76e-10,315;UBERON:0006603,5.76e-10,315;UBERON:0000007,7.10e-08,2;UBERON:0000923,1.80e-07,560;UBERON:0010316,1.80e-07,560;UBERON:0005291,1.80e-07,560;UBERON:0006598,1.80e-07,560;UBERON:0010317,1.80e-07,560;UBERON:0002532,1.80e-07,560;UBERON:0002050,2.46e-07,564;UBERON:0005423,8.81e-07,581 | |||
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| |||
|short_description=p12@BCAT1 | |||
}} |
Revision as of 22:14, 10 September 2013
Short description: | p12@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_BCAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -436bp_to_ENST00000539282, NM_001178093_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | F5H5E4B7Z2M5P54687 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.09e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.09e-84 | 42 |
defensive cell | 8.30e-82 | 48 |
phagocyte | 8.30e-82 | 48 |
monopoietic cell | 1.08e-63 | 59 |
monocyte | 1.08e-63 | 59 |
monoblast | 1.08e-63 | 59 |
promonocyte | 1.08e-63 | 59 |
macrophage dendritic cell progenitor | 2.35e-61 | 61 |
myeloid leukocyte | 3.35e-57 | 72 |
myeloid lineage restricted progenitor cell | 4.02e-56 | 66 |
granulocyte monocyte progenitor cell | 3.62e-55 | 67 |
myeloid cell | 2.63e-35 | 108 |
common myeloid progenitor | 2.63e-35 | 108 |
nongranular leukocyte | 9.78e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 3.42e-27 | 120 |
leukocyte | 3.03e-26 | 136 |
hematopoietic oligopotent progenitor cell | 8.15e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.15e-21 | 161 |
hematopoietic stem cell | 1.39e-19 | 168 |
hematopoietic cell | 3.80e-18 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.01e-54 | 76 |
bone element | 2.84e-49 | 82 |
skeletal element | 3.85e-44 | 90 |
immune system | 1.92e-42 | 93 |
hematopoietic system | 7.71e-40 | 98 |
blood island | 7.71e-40 | 98 |
skeletal system | 7.17e-39 | 100 |
hemolymphoid system | 2.37e-35 | 108 |
musculoskeletal system | 8.79e-20 | 167 |
lateral plate mesoderm | 4.21e-18 | 203 |
mesoderm | 5.76e-10 | 315 |
mesoderm-derived structure | 5.76e-10 | 315 |
presumptive mesoderm | 5.76e-10 | 315 |
pituitary gland | 7.10e-08 | 2 |
germ layer | 1.80e-07 | 560 |
germ layer / neural crest | 1.80e-07 | 560 |
embryonic tissue | 1.80e-07 | 560 |
presumptive structure | 1.80e-07 | 560 |
germ layer / neural crest derived structure | 1.80e-07 | 560 |
epiblast (generic) | 1.80e-07 | 560 |
embryonic structure | 2.46e-07 | 564 |
developing anatomical structure | 8.81e-07 | 581 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.