FFCP PHASE1:Hg19::chr12:57873329..57873429,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14130|TSSclassifier=W|UniProt=E9PDX9,Q8NAF3,Q9BRR9|association_with_transcript=0bp_to_ENST00000424809,NM_001080157,uc001sob.2_5end|coexpression_cluster_id=C2224|description=CAGE_peak_2_at_ARHGAP9_5end|id=chr12:57873329..57873429,-|ontology_enrichment_celltype=CL:0000037!9.07e-63!172;CL:0000566!9.07e-63!172;CL:0000738!1.41e-59!140;CL:0000988!3.64e-58!182;CL:0002032!6.39e-58!165;CL:0000837!6.39e-58!165;CL:0002031!3.89e-48!124;CL:0002087!1.78e-45!119;CL:0000763!3.21e-30!112;CL:0000049!3.21e-30!112;CL:0000766!2.40e-26!76;CL:0000542!2.13e-25!53;CL:0000051!2.13e-25!53;CL:0000838!3.99e-25!52;CL:0000557!6.04e-22!71;CL:0000839!4.62e-21!70;CL:0002057!3.26e-20!42;CL:0002009!1.45e-18!65;CL:0000860!1.03e-17!45;CL:0002194!1.60e-17!63;CL:0000576!1.60e-17!63;CL:0000040!1.60e-17!63;CL:0000559!1.60e-17!63;CL:0000791!7.54e-14!18;CL:0000789!7.54e-14!18;CL:0002420!7.54e-14!18;CL:0002419!7.54e-14!18;CL:0000790!7.54e-14!18;CL:0000084!7.02e-13!25;CL:0000827!7.02e-13!25;CL:0000945!5.58e-11!24;CL:0000826!5.58e-11!24;CL:0000625!1.46e-09!11;CL:0000094!2.11e-08!8;CL:0000134!4.74e-08!358;CL:0002320!3.59e-07!365|ontology_enrichment_celltype_v019=CL:0000860;4.35e-19;33!CL:0002057;4.35e-19;33!CL:0000791;5.18e-17;18!CL:0000789;5.18e-17;18!CL:0002419;5.18e-17;18!CL:0002087;3.33e-16;104!CL:0000473;8.89e-15;39!CL:0000234;8.89e-15;39!CL:0000576;1.81e-14;48!CL:0000542;4.61e-14;53!CL:0000766;6.91e-14;69!CL:0000738;3.93e-13;136!CL:0000084;1.42e-12;25!CL:0000625;1.30e-11;11!CL:0000945;2.32e-11;24!CL:0000988;1.29e-10;177!CL:0000094;4.02e-10;8!CL:0000763;3.51e-09;100|ontology_enrichment_celltype_v019_2=CL:0000738,4.49e-66,136;CL:0000037,1.69e-65,168;CL:0002032,1.31e-60,161;CL:0000837,1.31e-60,161;CL:0000988,8.36e-60,177;CL:0002031,6.54e-55,120;CL:0002087,1.22e-51,115;CL:0000766,8.03e-33,72;CL:0000763,7.13e-32,108;CL:0000049,7.13e-32,108;CL:0000557,3.25e-27,67;CL:0000542,3.80e-26,53;CL:0000051,3.80e-26,53;CL:0000839,4.35e-26,66;CL:0000838,8.58e-26,52;CL:0000860,5.02e-23,42;CL:0002057,5.02e-23,42;CL:0002009,6.30e-23,61;CL:0002194,1.32e-21,59;CL:0000576,1.32e-21,59;CL:0000040,1.32e-21,59;CL:0000559,1.32e-21,59;CL:0000473,1.46e-21,48;CL:0000234,1.46e-21,48;CL:0000791,6.25e-17,18;CL:0000789,6.25e-17,18;CL:0002420,6.25e-17,18;CL:0002419,6.25e-17,18;CL:0000790,6.25e-17,18;CL:0000084,1.78e-12,25;CL:0000827,1.78e-12,25;CL:0000625,1.44e-11,11;CL:0000945,1.48e-11,24;CL:0000826,1.48e-11,24;CL:0000134,2.73e-11,354;CL:0002320,2.05e-10,361;CL:0000094,4.05e-10,8;CL:0000219,1.73e-07,386|ontology_enrichment_development_v019=CL:0002057;3.90e-17;42!CL:0000790;5.18e-17;18!CL:0000051;4.61e-14;53!CL:0000049;4.23e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.12e-31!115;UBERON:0002390!6.19e-29!102;UBERON:0003061!6.19e-29!102;UBERON:0002193!1.18e-25!112;UBERON:0002371!1.73e-18!80;UBERON:0001474!1.35e-15!86;UBERON:0002405!3.52e-14!115;UBERON:0004765!3.72e-11!101;UBERON:0001434!3.72e-11!101;UBERON:0001049!1.24e-09!57;UBERON:0005068!1.24e-09!57;UBERON:0006241!1.24e-09!57;UBERON:0007135!1.24e-09!57;UBERON:0000178!1.10e-08!15;UBERON:0000179!1.10e-08!15;UBERON:0000463!1.10e-08!15;UBERON:0003080!3.09e-08!42;UBERON:0002780!4.43e-08!41;UBERON:0001890!4.43e-08!41;UBERON:0006240!4.43e-08!41;UBERON:0002020!2.69e-07!34;UBERON:0003528!2.69e-07!34;UBERON:0001893!5.09e-07!34;UBERON:0002791!6.39e-07!33;UBERON:0002616!6.76e-07!59;UBERON:0002384!8.95e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;6.32e-10;15!UBERON:0000179;6.32e-10;15!UBERON:0000463;6.32e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.38e-34,98;UBERON:0003061,5.38e-34,98;UBERON:0002193,5.53e-31,108;UBERON:0002371,8.25e-23,76;UBERON:0002405,1.02e-22,93;UBERON:0001474,9.22e-20,82;UBERON:0007023,1.46e-16,114;UBERON:0004765,2.17e-16,90;UBERON:0001434,1.30e-13,100;UBERON:0002384,5.87e-10,371;UBERON:0000178,6.41e-10,15;UBERON:0000179,6.41e-10,15;UBERON:0000463,6.41e-10,15;UBERON:0003081,1.50e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4553851369161,10.4267748601431,9.83884766420991,41.6966133459838,57.9582391126791,27.7120860735776,0,0,0,1.47187681102573,1.9903692548239,3.52320527201817,12.7418943962332,18.6506336147232,34.2877175731046,2.46307021663917,5.18229865630367,1.03030227053675,6.39752250630085,5.66813915533214,4.85168122375632,7.90258725479328,4.52284676824008,6.50383378879718,7.19230980805376,6.91633907628572,5.20260905754887,7.23965929546899,1.93645405075148,0,6.21199720490596,4.09359225086769,4.49446968890169,7.03992952453076,4.17207735198922,8.31138263538754,6.92687730392104,4.58766412529753,5.96714650745772,5.80418477257168,3.40431134814684,1.24564449799115,7.5374599577023,10.429658368404,6.73285418585862,2.42159801053347,5.15588690382591,2.84816148696796,0.422510572623884,1.06302149982522,1.25795187305026,3.93150209012733,4.05477610672067,2.893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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |||
|TSSclassifier=W | |||
|UniProt=E9PDX9,Q8NAF3,Q9BRR9 | |||
|association_with_transcript=0bp_to_ENST00000424809,NM_001080157,uc001sob.2_5end | |||
|coexpression_cluster_id=C2224 | |||
|description=CAGE_peak_2_at_ARHGAP9_5end | |||
|id=chr12:57873329..57873429,- | |||
|ontology_enrichment_celltype=CL:0000037!9.07e-63!172;CL:0000566!9.07e-63!172;CL:0000738!1.41e-59!140;CL:0000988!3.64e-58!182;CL:0002032!6.39e-58!165;CL:0000837!6.39e-58!165;CL:0002031!3.89e-48!124;CL:0002087!1.78e-45!119;CL:0000763!3.21e-30!112;CL:0000049!3.21e-30!112;CL:0000766!2.40e-26!76;CL:0000542!2.13e-25!53;CL:0000051!2.13e-25!53;CL:0000838!3.99e-25!52;CL:0000557!6.04e-22!71;CL:0000839!4.62e-21!70;CL:0002057!3.26e-20!42;CL:0002009!1.45e-18!65;CL:0000860!1.03e-17!45;CL:0002194!1.60e-17!63;CL:0000576!1.60e-17!63;CL:0000040!1.60e-17!63;CL:0000559!1.60e-17!63;CL:0000791!7.54e-14!18;CL:0000789!7.54e-14!18;CL:0002420!7.54e-14!18;CL:0002419!7.54e-14!18;CL:0000790!7.54e-14!18;CL:0000084!7.02e-13!25;CL:0000827!7.02e-13!25;CL:0000945!5.58e-11!24;CL:0000826!5.58e-11!24;CL:0000625!1.46e-09!11;CL:0000094!2.11e-08!8;CL:0000134!4.74e-08!358;CL:0002320!3.59e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-19;33!CL:0002057;4.35e-19;33!CL:0000791;5.18e-17;18!CL:0000789;5.18e-17;18!CL:0002419;5.18e-17;18!CL:0002087;3.33e-16;104!CL:0000473;8.89e-15;39!CL:0000234;8.89e-15;39!CL:0000576;1.81e-14;48!CL:0000542;4.61e-14;53!CL:0000766;6.91e-14;69!CL:0000738;3.93e-13;136!CL:0000084;1.42e-12;25!CL:0000625;1.30e-11;11!CL:0000945;2.32e-11;24!CL:0000988;1.29e-10;177!CL:0000094;4.02e-10;8!CL:0000763;3.51e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.49e-66,136;CL:0000037,1.69e-65,168;CL:0002032,1.31e-60,161;CL:0000837,1.31e-60,161;CL:0000988,8.36e-60,177;CL:0002031,6.54e-55,120;CL:0002087,1.22e-51,115;CL:0000766,8.03e-33,72;CL:0000763,7.13e-32,108;CL:0000049,7.13e-32,108;CL:0000557,3.25e-27,67;CL:0000542,3.80e-26,53;CL:0000051,3.80e-26,53;CL:0000839,4.35e-26,66;CL:0000838,8.58e-26,52;CL:0000860,5.02e-23,42;CL:0002057,5.02e-23,42;CL:0002009,6.30e-23,61;CL:0002194,1.32e-21,59;CL:0000576,1.32e-21,59;CL:0000040,1.32e-21,59;CL:0000559,1.32e-21,59;CL:0000473,1.46e-21,48;CL:0000234,1.46e-21,48;CL:0000791,6.25e-17,18;CL:0000789,6.25e-17,18;CL:0002420,6.25e-17,18;CL:0002419,6.25e-17,18;CL:0000790,6.25e-17,18;CL:0000084,1.78e-12,25;CL:0000827,1.78e-12,25;CL:0000625,1.44e-11,11;CL:0000945,1.48e-11,24;CL:0000826,1.48e-11,24;CL:0000134,2.73e-11,354;CL:0002320,2.05e-10,361;CL:0000094,4.05e-10,8;CL:0000219,1.73e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-17;42!CL:0000790;5.18e-17;18!CL:0000051;4.61e-14;53!CL:0000049;4.23e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-31!115;UBERON:0002390!6.19e-29!102;UBERON:0003061!6.19e-29!102;UBERON:0002193!1.18e-25!112;UBERON:0002371!1.73e-18!80;UBERON:0001474!1.35e-15!86;UBERON:0002405!3.52e-14!115;UBERON:0004765!3.72e-11!101;UBERON:0001434!3.72e-11!101;UBERON:0001049!1.24e-09!57;UBERON:0005068!1.24e-09!57;UBERON:0006241!1.24e-09!57;UBERON:0007135!1.24e-09!57;UBERON:0000178!1.10e-08!15;UBERON:0000179!1.10e-08!15;UBERON:0000463!1.10e-08!15;UBERON:0003080!3.09e-08!42;UBERON:0002780!4.43e-08!41;UBERON:0001890!4.43e-08!41;UBERON:0006240!4.43e-08!41;UBERON:0002020!2.69e-07!34;UBERON:0003528!2.69e-07!34;UBERON:0001893!5.09e-07!34;UBERON:0002791!6.39e-07!33;UBERON:0002616!6.76e-07!59;UBERON:0002384!8.95e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.32e-10;15!UBERON:0000179;6.32e-10;15!UBERON:0000463;6.32e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.38e-34,98;UBERON:0003061,5.38e-34,98;UBERON:0002193,5.53e-31,108;UBERON:0002371,8.25e-23,76;UBERON:0002405,1.02e-22,93;UBERON:0001474,9.22e-20,82;UBERON:0007023,1.46e-16,114;UBERON:0004765,2.17e-16,90;UBERON:0001434,1.30e-13,100;UBERON:0002384,5.87e-10,371;UBERON:0000178,6.41e-10,15;UBERON:0000179,6.41e-10,15;UBERON:0000463,6.41e-10,15;UBERON:0003081,1.50e-07,203 | |||
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| |||
|short_description=p2@ARHGAP9 | |||
}} |
Revision as of 23:40, 10 September 2013
Short description: | p2@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARHGAP9_5end |
Coexpression cluster: | C2224_Natural_Neutrophils_Eosinophils_Basophils_CD8_acute_NK |
Association with transcript: | 0bp_to_ENST00000424809, NM_001080157, uc001sob.2_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | E9PDX9Q8NAF3Q9BRR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.38e-34 | 98 |
blood island | 5.38e-34 | 98 |
hemolymphoid system | 5.53e-31 | 108 |
bone marrow | 8.25e-23 | 76 |
immune system | 1.02e-22 | 93 |
bone element | 9.22e-20 | 82 |
adult organism | 1.46e-16 | 114 |
skeletal element | 2.17e-16 | 90 |
skeletal system | 1.30e-13 | 100 |
connective tissue | 5.87e-10 | 371 |
blood | 6.41e-10 | 15 |
haemolymphatic fluid | 6.41e-10 | 15 |
organism substance | 6.41e-10 | 15 |
lateral plate mesoderm | 1.50e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.