FFCP PHASE1:Hg19::chr12:62729139..62729151,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C13|description=CAGE_peak_at_chr12:62729139..62729151,+|id=chr12:62729139..62729151,+|ontology_enrichment_celltype=CL:0002057!1.01e-25!42;CL:0000860!6.38e-25!45;CL:0000766!7.44e-24!76;CL:0000839!4.72e-23!70;CL:0002194!4.19e-22!63;CL:0000576!4.19e-22!63;CL:0000040!4.19e-22!63;CL:0000559!4.19e-22!63;CL:0002009!7.67e-21!65;CL:0000557!5.37e-20!71;CL:0000738!9.43e-19!140;CL:0002087!2.36e-18!119;CL:0000763!5.03e-18!112;CL:0000049!5.03e-18!112;CL:0000037!1.91e-17!172;CL:0000566!1.91e-17!172;CL:0002031!6.84e-17!124;CL:0002032!2.91e-16!165;CL:0000837!2.91e-16!165;CL:0000988!7.15e-15!182|ontology_enrichment_celltype_v019=CL:0000775;6.87e-22;3!CL:0000473;9.84e-22;39!CL:0000234;9.84e-22;39!CL:0000860;4.28e-20;33!CL:0002057;4.28e-20;33!CL:0000766;2.17e-17;69!CL:0000094;2.21e-14;8!CL:0000576;6.30e-13;48!CL:0000081;1.71e-10;11!CL:0000763;5.08e-07;100|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-26,72;CL:0000473,1.64e-24,48;CL:0000234,1.64e-24,48;CL:0000775,7.42e-22,3;CL:0000860,1.34e-20,42;CL:0002057,1.34e-20,42;CL:0000738,1.93e-19,136;CL:0002194,4.57e-19,59;CL:0000576,4.57e-19,59;CL:0000040,4.57e-19,59;CL:0000559,4.57e-19,59;CL:0002009,2.31e-18,61;CL:0000839,8.62e-17,66;CL:0000557,1.67e-16,67;CL:0000763,1.74e-16,108;CL:0000049,1.74e-16,108;CL:0000037,5.99e-15,168;CL:0002087,6.31e-15,115;CL:0000094,2.26e-14,8;CL:0002032,3.54e-14,161;CL:0000837,3.54e-14,161;CL:0000988,5.62e-14,177;CL:0002031,1.80e-12,120;CL:0000081,1.74e-10,11|ontology_enrichment_development_v019=CL:0002057;8.42e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.24e-15!80;UBERON:0002390!1.58e-15!102;UBERON:0003061!1.58e-15!102;UBERON:0002193!1.24e-14!112;UBERON:0001474!2.01e-14!86;UBERON:0004765!2.79e-11!101;UBERON:0001434!2.79e-11!101;UBERON:0002405!2.36e-10!115|ontology_enrichment_uberon_v019=UBERON:0001000;5.77e-08;1!UBERON:0001389;5.77e-08;1!UBERON:0000026;5.77e-08;1!UBERON:0008784;5.77e-08;1!UBERON:0006058;5.77e-08;1!UBERON:0003663;5.77e-08;1!UBERON:0004256;5.77e-08;1!UBERON:0004708;5.77e-08;1!UBERON:0002101;5.77e-08;1!UBERON:0004709;5.77e-08;1!UBERON:0002529;5.77e-08;1!UBERON:0010538;5.77e-08;1!UBERON:0003661;5.77e-08;1!UBERON:0010890;5.77e-08;1!UBERON:0002471;5.77e-08;1!UBERON:0001383;5.77e-08;1!UBERON:0010758;5.77e-08;1!UBERON:0010707;5.77e-08;1!UBERON:0000978;5.77e-08;1!UBERON:0002103;5.77e-08;1!UBERON:0005352;5.77e-08;1!UBERON:0001665;5.77e-08;1!UBERON:0003823;5.77e-08;1!UBERON:0000154;5.77e-08;1!UBERON:0010709;5.77e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-14,76;UBERON:0002390,5.62e-14,98;UBERON:0003061,5.62e-14,98;UBERON:0001474,4.95e-13,82;UBERON:0002193,2.09e-12,108;UBERON:0004765,1.20e-11,90;UBERON:0002405,3.43e-11,93;UBERON:0001434,3.14e-10,100;UBERON:0005418,2.71e-08,1;UBERON:0001389,2.71e-08,1;UBERON:0000026,2.71e-08,1;UBERON:0008784,2.71e-08,1;UBERON:0006058,2.71e-08,1;UBERON:0003663,2.71e-08,1;UBERON:0004256,2.71e-08,1;UBERON:0004708,2.71e-08,1;UBERON:0002101,2.71e-08,1;UBERON:0004709,2.71e-08,1;UBERON:0002529,2.71e-08,1;UBERON:0010538,2.71e-08,1;UBERON:0003661,2.71e-08,1;UBERON:0010890,2.71e-08,1;UBERON:0002471,2.71e-08,1;UBERON:0001383,2.71e-08,1;UBERON:0004357,2.71e-08,1;UBERON:0004347,2.71e-08,1;UBERON:0005420,2.71e-08,1;UBERON:0005732,2.71e-08,1;UBERON:0010758,2.71e-08,1;UBERON:0010707,2.71e-08,1;UBERON:0000978,2.71e-08,1;UBERON:0002103,2.71e-08,1;UBERON:0001665,2.71e-08,1;UBERON:0003823,2.71e-08,1;UBERON:0000154,2.71e-08,1;UBERON:0010709,2.71e-08,1;UBERON:0005733,2.71e-08,1;UBERON:0005730,2.71e-08,1;UBERON:0001000,7.10e-08,1;UBERON:0005352,7.10e-08,1|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0,0,0,0,0,0.284338464974843,0,0,0.802177789880567,1.51907609501096,0.223915474239924,0,0,1.01778767145695,0,0.485168122375632,0.464858073811369,1.23350366406548,0.929119112685311,1.1507695692886,1.7931249457037,0.709446689665756,1.03423704220986,1.29096936716765,0,0.188242339542605,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.997318288108159,1.27867425159808,1.45104619314292,0.56738522469114,1.24564449799115,2.51248665256743,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.901061357049038,0.803627933485401,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0.334372990781356,0,0.946895611469467,0,0.111410456885174,0.589211814949674,0.221533894583621,1.62482318259009,0.640456598628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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr12:62729139..62729151,+ | |||
|id=chr12:62729139..62729151,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.01e-25!42;CL:0000860!6.38e-25!45;CL:0000766!7.44e-24!76;CL:0000839!4.72e-23!70;CL:0002194!4.19e-22!63;CL:0000576!4.19e-22!63;CL:0000040!4.19e-22!63;CL:0000559!4.19e-22!63;CL:0002009!7.67e-21!65;CL:0000557!5.37e-20!71;CL:0000738!9.43e-19!140;CL:0002087!2.36e-18!119;CL:0000763!5.03e-18!112;CL:0000049!5.03e-18!112;CL:0000037!1.91e-17!172;CL:0000566!1.91e-17!172;CL:0002031!6.84e-17!124;CL:0002032!2.91e-16!165;CL:0000837!2.91e-16!165;CL:0000988!7.15e-15!182 | |||
|ontology_enrichment_celltype_v019=CL:0000775;6.87e-22;3!CL:0000473;9.84e-22;39!CL:0000234;9.84e-22;39!CL:0000860;4.28e-20;33!CL:0002057;4.28e-20;33!CL:0000766;2.17e-17;69!CL:0000094;2.21e-14;8!CL:0000576;6.30e-13;48!CL:0000081;1.71e-10;11!CL:0000763;5.08e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-26,72;CL:0000473,1.64e-24,48;CL:0000234,1.64e-24,48;CL:0000775,7.42e-22,3;CL:0000860,1.34e-20,42;CL:0002057,1.34e-20,42;CL:0000738,1.93e-19,136;CL:0002194,4.57e-19,59;CL:0000576,4.57e-19,59;CL:0000040,4.57e-19,59;CL:0000559,4.57e-19,59;CL:0002009,2.31e-18,61;CL:0000839,8.62e-17,66;CL:0000557,1.67e-16,67;CL:0000763,1.74e-16,108;CL:0000049,1.74e-16,108;CL:0000037,5.99e-15,168;CL:0002087,6.31e-15,115;CL:0000094,2.26e-14,8;CL:0002032,3.54e-14,161;CL:0000837,3.54e-14,161;CL:0000988,5.62e-14,177;CL:0002031,1.80e-12,120;CL:0000081,1.74e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-15!80;UBERON:0002390!1.58e-15!102;UBERON:0003061!1.58e-15!102;UBERON:0002193!1.24e-14!112;UBERON:0001474!2.01e-14!86;UBERON:0004765!2.79e-11!101;UBERON:0001434!2.79e-11!101;UBERON:0002405!2.36e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;5.77e-08;1!UBERON:0001389;5.77e-08;1!UBERON:0000026;5.77e-08;1!UBERON:0008784;5.77e-08;1!UBERON:0006058;5.77e-08;1!UBERON:0003663;5.77e-08;1!UBERON:0004256;5.77e-08;1!UBERON:0004708;5.77e-08;1!UBERON:0002101;5.77e-08;1!UBERON:0004709;5.77e-08;1!UBERON:0002529;5.77e-08;1!UBERON:0010538;5.77e-08;1!UBERON:0003661;5.77e-08;1!UBERON:0010890;5.77e-08;1!UBERON:0002471;5.77e-08;1!UBERON:0001383;5.77e-08;1!UBERON:0010758;5.77e-08;1!UBERON:0010707;5.77e-08;1!UBERON:0000978;5.77e-08;1!UBERON:0002103;5.77e-08;1!UBERON:0005352;5.77e-08;1!UBERON:0001665;5.77e-08;1!UBERON:0003823;5.77e-08;1!UBERON:0000154;5.77e-08;1!UBERON:0010709;5.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-14,76;UBERON:0002390,5.62e-14,98;UBERON:0003061,5.62e-14,98;UBERON:0001474,4.95e-13,82;UBERON:0002193,2.09e-12,108;UBERON:0004765,1.20e-11,90;UBERON:0002405,3.43e-11,93;UBERON:0001434,3.14e-10,100;UBERON:0005418,2.71e-08,1;UBERON:0001389,2.71e-08,1;UBERON:0000026,2.71e-08,1;UBERON:0008784,2.71e-08,1;UBERON:0006058,2.71e-08,1;UBERON:0003663,2.71e-08,1;UBERON:0004256,2.71e-08,1;UBERON:0004708,2.71e-08,1;UBERON:0002101,2.71e-08,1;UBERON:0004709,2.71e-08,1;UBERON:0002529,2.71e-08,1;UBERON:0010538,2.71e-08,1;UBERON:0003661,2.71e-08,1;UBERON:0010890,2.71e-08,1;UBERON:0002471,2.71e-08,1;UBERON:0001383,2.71e-08,1;UBERON:0004357,2.71e-08,1;UBERON:0004347,2.71e-08,1;UBERON:0005420,2.71e-08,1;UBERON:0005732,2.71e-08,1;UBERON:0010758,2.71e-08,1;UBERON:0010707,2.71e-08,1;UBERON:0000978,2.71e-08,1;UBERON:0002103,2.71e-08,1;UBERON:0001665,2.71e-08,1;UBERON:0003823,2.71e-08,1;UBERON:0000154,2.71e-08,1;UBERON:0010709,2.71e-08,1;UBERON:0005733,2.71e-08,1;UBERON:0005730,2.71e-08,1;UBERON:0001000,7.10e-08,1;UBERON:0005352,7.10e-08,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0,0,0,0,0,0.284338464974843,0,0,0.802177789880567,1.51907609501096,0.223915474239924,0,0,1.01778767145695,0,0.485168122375632,0.464858073811369,1.23350366406548,0.929119112685311,1.1507695692886,1.7931249457037,0.709446689665756,1.03423704220986,1.29096936716765,0,0.188242339542605,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.997318288108159,1.27867425159808,1.45104619314292,0.56738522469114,1.24564449799115,2.51248665256743,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.901061357049038,0.803627933485401,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0.334372990781356,0,0.946895611469467,0,0.111410456885174,0.589211814949674,0.221533894583621,1.62482318259009,0.640456598628376,0.260118695119756,0.328875809207352,0.552700035571697,0,0.14828656316206,0,3.1360657141493,0.226618685395132,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0,1.33720097891754,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,3.9534125230819,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0,15.7291475028908,20.9413021442817,2.07207756718018,0.24538298343828,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.431428401637234,1.06727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0,0,0,1.02193298195737,0,0,0,0,0.503464760927528,0.37950746544837,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,1.18375320854817,0,0.61214552326098,0,0,0,0.664653872707185,0,0,1.19472429772959,0,0.277349346026277,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.366078794705889,0.3755727921195,0,0.221858103073705,0,0,0.124980407962107,0,0,0.235265819698172,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0.226705925512272,0,0,0,0,0.438568099157414,0.176689145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| |||
|short_description=p@chr12:62729139..62729151,+ | |||
}} |
Revision as of 23:50, 10 September 2013
Short description: | p@chr12:62729139..62729151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:62729139..62729151, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.17e-26 | 72 |
defensive cell | 1.64e-24 | 48 |
phagocyte | 1.64e-24 | 48 |
neutrophil | 7.42e-22 | 3 |
classical monocyte | 1.34e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-20 | 42 |
leukocyte | 1.93e-19 | 136 |
monopoietic cell | 4.57e-19 | 59 |
monocyte | 4.57e-19 | 59 |
monoblast | 4.57e-19 | 59 |
promonocyte | 4.57e-19 | 59 |
macrophage dendritic cell progenitor | 2.31e-18 | 61 |
myeloid lineage restricted progenitor cell | 8.62e-17 | 66 |
granulocyte monocyte progenitor cell | 1.67e-16 | 67 |
myeloid cell | 1.74e-16 | 108 |
common myeloid progenitor | 1.74e-16 | 108 |
hematopoietic stem cell | 5.99e-15 | 168 |
nongranular leukocyte | 6.31e-15 | 115 |
granulocyte | 2.26e-14 | 8 |
hematopoietic oligopotent progenitor cell | 3.54e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-14 | 161 |
hematopoietic cell | 5.62e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 1.80e-12 | 120 |
blood cell | 1.74e-10 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.