FFCP PHASE1:Hg19::chr12:87232522..87232531,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25834|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=30871|TSSclassifier=W|UniProt=Q9UBM8|association_with_transcript=149bp_to_NM_013244,uc001taj.3,uc001tak.3,uc001tal.3_5end|coexpression_cluster_id=C10|description=CAGE_peak_11_at_MGAT4C_5end|id=chr12:87232522..87232531,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.38e-41!69;UBERON:0006238!5.38e-41!69;UBERON:0001049!2.78e-40!57;UBERON:0005068!2.78e-40!57;UBERON:0006241!2.78e-40!57;UBERON:0007135!2.78e-40!57;UBERON:0002616!7.54e-39!59;UBERON:0001869!4.89e-36!32;UBERON:0001017!3.40e-34!82;UBERON:0001893!7.18e-34!34;UBERON:0002020!8.58e-34!34;UBERON:0003528!8.58e-34!34;UBERON:0005743!1.66e-32!86;UBERON:0001950!2.48e-32!20;UBERON:0002619!2.04e-29!22;UBERON:0002791!3.14e-29!33;UBERON:0000073!3.27e-29!94;UBERON:0001016!3.27e-29!94;UBERON:0002780!6.58e-28!41;UBERON:0001890!6.58e-28!41;UBERON:0006240!6.58e-28!41;UBERON:0003080!3.25e-27!42;UBERON:0002298!1.38e-26!8;UBERON:0001896!2.69e-26!3;UBERON:0005290!2.69e-26!3;UBERON:0010096!2.69e-26!3;UBERON:0003075!6.17e-26!86;UBERON:0007284!6.17e-26!86;UBERON:0000956!6.94e-26!25;UBERON:0000203!6.94e-26!25;UBERON:0002346!1.13e-24!90;UBERON:0000033!1.30e-24!123;UBERON:0000153!2.42e-23!129;UBERON:0007811!2.42e-23!129;UBERON:0000200!2.64e-23!6;UBERON:0003056!2.81e-18!61;UBERON:0004733!1.02e-17!12;UBERON:0002028!1.02e-17!12;UBERON:0007277!1.02e-17!12;UBERON:0007023!2.13e-16!115;UBERON:0004732!2.38e-16!13;UBERON:0001872!4.36e-16!5;UBERON:0004121!3.93e-15!169;UBERON:0000924!1.02e-14!173;UBERON:0006601!1.02e-14!173;UBERON:0003076!3.70e-14!15;UBERON:0003057!3.70e-14!15;UBERON:0002771!1.41e-12!3;UBERON:0000988!2.38e-12!3;UBERON:0000025!1.96e-11!194;UBERON:0001871!1.73e-10!7;UBERON:0007190!3.10e-10!1;UBERON:0002022!3.71e-10!1;UBERON:0001882!4.44e-10!1;UBERON:0005403!4.44e-10!1;UBERON:0003112!4.85e-10!1;UBERON:0000032!4.85e-10!1;UBERON:0005253!4.85e-10!1;UBERON:0003128!4.85e-10!1;UBERON:0002241!4.85e-10!1;UBERON:0001703!4.85e-10!1;UBERON:0004761!4.85e-10!1;UBERON:0009617!4.85e-10!1;UBERON:0002581!9.82e-10!1;UBERON:0000369!1.07e-09!4;UBERON:0002435!1.07e-09!4;UBERON:0000204!1.07e-09!4;UBERON:0010082!1.07e-09!4;UBERON:0002308!2.79e-09!9;UBERON:0000125!2.79e-09!9;UBERON:0004111!1.31e-08!241;UBERON:0000064!1.67e-08!219;UBERON:0000475!4.28e-08!365;UBERON:0000477!8.81e-08!286;UBERON:0000483!6.03e-07!309;UBERON:0000119!7.56e-07!312|ontology_enrichment_uberon_v019=UBERON:0000922;3.54e-19;49!UBERON:0001950;8.29e-18;20!UBERON:0002619;2.44e-16;22!UBERON:0000956;1.48e-14;25!UBERON:0000203;1.48e-14;25!UBERON:0002114;2.09e-14;2!UBERON:0002791;4.67e-11;32!UBERON:0001869;8.45e-11;32!UBERON:0003528;2.04e-10;34!UBERON:0002020;2.04e-10;34!UBERON:0002021;2.53e-09;5!UBERON:0001872;2.74e-09;5!UBERON:0002108;3.49e-09;4!UBERON:0001893;7.29e-09;34!UBERON:0002780;9.70e-09;41!UBERON:0001890;9.70e-09;41!UBERON:0000955;1.04e-08;68!UBERON:0001016;1.86e-07;83!UBERON:0001871;6.04e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.29e-18,20;UBERON:0002619,2.44e-16,22;UBERON:0000956,1.48e-14,25;UBERON:0000203,1.48e-14,25;UBERON:0002114,2.09e-14,2;UBERON:0002791,1.19e-11,32;UBERON:0001869,1.19e-11,32;UBERON:0003528,4.95e-11,34;UBERON:0002020,4.95e-11,34;UBERON:0001893,4.95e-11,34;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0002780,2.52e-09,41;UBERON:0001890,2.52e-09,41;UBERON:0003080,2.52e-09,41;UBERON:0006240,2.52e-09,41;UBERON:0002021,2.53e-09,5;UBERON:0001872,2.74e-09,5;UBERON:0002108,3.49e-09,4;UBERON:0001017,2.54e-08,81;UBERON:0001016,1.45e-07,89;UBERON:0000073,2.03e-07,53;UBERON:0002616,2.03e-07,53;UBERON:0001049,4.58e-07,56;UBERON:0005068,4.58e-07,56;UBERON:0006241,4.58e-07,56;UBERON:0007135,4.58e-07,56;UBERON:0001871,6.04e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25834 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30871 | |||
|TSSclassifier=W | |||
|UniProt=Q9UBM8 | |||
|association_with_transcript=149bp_to_NM_013244,uc001taj.3,uc001tak.3,uc001tal.3_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_11_at_MGAT4C_5end | |||
|id=chr12:87232522..87232531,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.38e-41!69;UBERON:0006238!5.38e-41!69;UBERON:0001049!2.78e-40!57;UBERON:0005068!2.78e-40!57;UBERON:0006241!2.78e-40!57;UBERON:0007135!2.78e-40!57;UBERON:0002616!7.54e-39!59;UBERON:0001869!4.89e-36!32;UBERON:0001017!3.40e-34!82;UBERON:0001893!7.18e-34!34;UBERON:0002020!8.58e-34!34;UBERON:0003528!8.58e-34!34;UBERON:0005743!1.66e-32!86;UBERON:0001950!2.48e-32!20;UBERON:0002619!2.04e-29!22;UBERON:0002791!3.14e-29!33;UBERON:0000073!3.27e-29!94;UBERON:0001016!3.27e-29!94;UBERON:0002780!6.58e-28!41;UBERON:0001890!6.58e-28!41;UBERON:0006240!6.58e-28!41;UBERON:0003080!3.25e-27!42;UBERON:0002298!1.38e-26!8;UBERON:0001896!2.69e-26!3;UBERON:0005290!2.69e-26!3;UBERON:0010096!2.69e-26!3;UBERON:0003075!6.17e-26!86;UBERON:0007284!6.17e-26!86;UBERON:0000956!6.94e-26!25;UBERON:0000203!6.94e-26!25;UBERON:0002346!1.13e-24!90;UBERON:0000033!1.30e-24!123;UBERON:0000153!2.42e-23!129;UBERON:0007811!2.42e-23!129;UBERON:0000200!2.64e-23!6;UBERON:0003056!2.81e-18!61;UBERON:0004733!1.02e-17!12;UBERON:0002028!1.02e-17!12;UBERON:0007277!1.02e-17!12;UBERON:0007023!2.13e-16!115;UBERON:0004732!2.38e-16!13;UBERON:0001872!4.36e-16!5;UBERON:0004121!3.93e-15!169;UBERON:0000924!1.02e-14!173;UBERON:0006601!1.02e-14!173;UBERON:0003076!3.70e-14!15;UBERON:0003057!3.70e-14!15;UBERON:0002771!1.41e-12!3;UBERON:0000988!2.38e-12!3;UBERON:0000025!1.96e-11!194;UBERON:0001871!1.73e-10!7;UBERON:0007190!3.10e-10!1;UBERON:0002022!3.71e-10!1;UBERON:0001882!4.44e-10!1;UBERON:0005403!4.44e-10!1;UBERON:0003112!4.85e-10!1;UBERON:0000032!4.85e-10!1;UBERON:0005253!4.85e-10!1;UBERON:0003128!4.85e-10!1;UBERON:0002241!4.85e-10!1;UBERON:0001703!4.85e-10!1;UBERON:0004761!4.85e-10!1;UBERON:0009617!4.85e-10!1;UBERON:0002581!9.82e-10!1;UBERON:0000369!1.07e-09!4;UBERON:0002435!1.07e-09!4;UBERON:0000204!1.07e-09!4;UBERON:0010082!1.07e-09!4;UBERON:0002308!2.79e-09!9;UBERON:0000125!2.79e-09!9;UBERON:0004111!1.31e-08!241;UBERON:0000064!1.67e-08!219;UBERON:0000475!4.28e-08!365;UBERON:0000477!8.81e-08!286;UBERON:0000483!6.03e-07!309;UBERON:0000119!7.56e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.54e-19;49!UBERON:0001950;8.29e-18;20!UBERON:0002619;2.44e-16;22!UBERON:0000956;1.48e-14;25!UBERON:0000203;1.48e-14;25!UBERON:0002114;2.09e-14;2!UBERON:0002791;4.67e-11;32!UBERON:0001869;8.45e-11;32!UBERON:0003528;2.04e-10;34!UBERON:0002020;2.04e-10;34!UBERON:0002021;2.53e-09;5!UBERON:0001872;2.74e-09;5!UBERON:0002108;3.49e-09;4!UBERON:0001893;7.29e-09;34!UBERON:0002780;9.70e-09;41!UBERON:0001890;9.70e-09;41!UBERON:0000955;1.04e-08;68!UBERON:0001016;1.86e-07;83!UBERON:0001871;6.04e-07;6 | |||
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|short_description=p11@MGAT4C | |||
}} |
Revision as of 00:45, 11 September 2013
Short description: | p11@MGAT4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MGAT4C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 149bp_to_NM_013244, uc001taj.3, uc001tak.3, uc001tal.3_5end |
EntrezGene: | MGAT4C |
HGNC: | 30871 |
UniProt: | Q9UBM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 8.29e-18 | 20 |
regional part of cerebral cortex | 2.44e-16 | 22 |
cerebral cortex | 1.48e-14 | 25 |
pallium | 1.48e-14 | 25 |
duodenum | 2.09e-14 | 2 |
regional part of telencephalon | 1.19e-11 | 32 |
cerebral hemisphere | 1.19e-11 | 32 |
brain grey matter | 4.95e-11 | 34 |
gray matter | 4.95e-11 | 34 |
telencephalon | 4.95e-11 | 34 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
regional part of forebrain | 2.52e-09 | 41 |
forebrain | 2.52e-09 | 41 |
anterior neural tube | 2.52e-09 | 41 |
future forebrain | 2.52e-09 | 41 |
occipital lobe | 2.53e-09 | 5 |
parietal lobe | 2.74e-09 | 5 |
small intestine | 3.49e-09 | 4 |
central nervous system | 2.54e-08 | 81 |
nervous system | 1.45e-07 | 89 |
regional part of nervous system | 2.03e-07 | 53 |
regional part of brain | 2.03e-07 | 53 |
neural tube | 4.58e-07 | 56 |
neural rod | 4.58e-07 | 56 |
future spinal cord | 4.58e-07 | 56 |
neural keel | 4.58e-07 | 56 |
temporal lobe | 6.04e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.