FFCP PHASE1:Hg19::chr16:50776126..50776135,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1540|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2584|TSSclassifier=S|UniProt=Q9NQC7|association_with_transcript=97bp_to_ENST00000398568,NM_001042412,uc002egr.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_CYLD_5end|id=chr16:50776126..50776135,+|ontology_enrichment_celltype=CL:0000738!1.80e-27!140;CL:0002031!4.22e-20!124;CL:0000037!9.85e-20!172;CL:0000566!9.85e-20!172;CL:0000766!3.37e-19!76;CL:0002087!3.82e-18!119;CL:0002032!4.50e-18!165;CL:0000837!4.50e-18!165;CL:0000988!8.35e-18!182;CL:0002057!2.62e-17!42;CL:0000860!6.42e-16!45;CL:0000557!9.32e-15!71;CL:0000839!5.28e-13!70;CL:0002009!1.61e-12!65;CL:0000763!4.74e-12!112;CL:0000049!4.74e-12!112;CL:0002194!2.99e-11!63;CL:0000576!2.99e-11!63;CL:0000040!2.99e-11!63;CL:0000559!2.99e-11!63;CL:0000094!1.91e-08!8;CL:0002393!2.23e-08!9;CL:0002397!2.23e-08!9;CL:0000791!3.89e-08!18;CL:0000789!3.89e-08!18;CL:0002420!3.89e-08!18;CL:0002419!3.89e-08!18;CL:0000790!3.89e-08!18|ontology_enrichment_celltype_v019=CL:0000094;2.08e-21;8!CL:0002393;3.86e-20;6!CL:0002397;3.86e-20;6!CL:0000081;2.87e-15;11!CL:0000624;2.36e-14;6!CL:0000766;2.71e-12;69!CL:0000775;1.56e-11;3!CL:0000623;2.03e-11;3!CL:0000791;4.80e-11;18!CL:0000789;4.80e-11;18!CL:0002419;4.80e-11;18!CL:0000576;1.85e-10;48!CL:0000771;9.51e-09;2!CL:0001014;1.42e-08;2!CL:0001016;1.42e-08;2!CL:0002087;4.62e-08;104!CL:0000860;7.35e-08;33!CL:0002057;7.35e-08;33!CL:0000084;1.42e-07;25!CL:0000738;7.17e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-30,136;CL:0000037,6.82e-23,168;CL:0002032,6.94e-23,161;CL:0000837,6.94e-23,161;CL:0000766,9.59e-23,72;CL:0000094,1.28e-21,8;CL:0000988,3.07e-21,177;CL:0002031,9.76e-21,120;CL:0000860,1.62e-18,42;CL:0002057,1.62e-18,42;CL:0002087,1.90e-18,115;CL:0002393,4.03e-17,9;CL:0002397,4.03e-17,9;CL:0000763,5.00e-16,108;CL:0000049,5.00e-16,108;CL:0000473,1.09e-15,48;CL:0000234,1.09e-15,48;CL:0000081,2.02e-15,11;CL:0000557,9.62e-15,67;CL:0002009,1.03e-14,61;CL:0000624,1.53e-14,6;CL:0002194,9.50e-12,59;CL:0000576,9.50e-12,59;CL:0000040,9.50e-12,59;CL:0000559,9.50e-12,59;CL:0000623,1.21e-11,3;CL:0000825,1.21e-11,3;CL:0000839,1.23e-11,66;CL:0000775,1.25e-11,3;CL:0000791,3.94e-11,18;CL:0000789,3.94e-11,18;CL:0002420,3.94e-11,18;CL:0002419,3.94e-11,18;CL:0000790,3.94e-11,18;CL:0000771,9.55e-09,2;CL:0001014,1.38e-08,2;CL:0001016,1.38e-08,2;CL:0000084,1.24e-07,25;CL:0000827,1.24e-07,25;CL:0000134,3.94e-07,354;CL:0000838,4.67e-07,52;CL:0000542,7.05e-07,53;CL:0000051,7.05e-07,53;CL:0002320,8.16e-07,361|ontology_enrichment_development_v019=CL:0002057;4.18e-13;42!CL:0000790;4.80e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.40e-15!102;UBERON:0003061!3.40e-15!102;UBERON:0002371!1.29e-12!80;UBERON:0002193!1.81e-12!112;UBERON:0001474!3.33e-12!86;UBERON:0004765!1.13e-11!101;UBERON:0001434!1.13e-11!101;UBERON:0002405!8.01e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-12,76;UBERON:0001474,3.31e-11,82;UBERON:0002390,7.90e-11,98;UBERON:0003061,7.90e-11,98;UBERON:0002405,1.67e-10,93;UBERON:0004765,8.26e-10,90;UBERON:0002193,2.30e-09,108;UBERON:0001434,2.19e-08,100|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0.534893840235659,0.164201178899891,0.393553906568396,2.36018566109342,0.767658796194425,1.70297735647684,0,0.30120591877825,0,0,0,0.293600439334847,2.21598163412751,3.40925560699241,2.60413044859022,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0.929119112685311,0.863077176966451,0.768482119587302,1.41889337933151,1.37898272294647,1.29096936716765,1.35426486594342,0.376484679085209,1.36453075028923,0.674170453335254,2.14258724659632,0.641858054152187,0,0,0.997318288108159,0.852449501065388,0,2.26954089876456,1.86846674698672,0.251248665256743,0,1.08594422352558,0,0.368277635987565,1.58231193720442,1.05627643155971,1.06302149982522,1.04829322754188,0.673971786878971,0.150176892841506,0,0.570025487482497,0.99458338599545,1.0959849225878,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,1.14681968437569,0,2.80254281490768,0.263384084775077,3.73748563216283,1.96505381374582,2.46721798799411,4.34684888015763,0.651844533267181,2.36723902867367,1.94826728407911,1.33692548262208,2.06224135232386,2.21533894583621,1.89562704635511,2.68991771423918,2.73124629875744,1.64437904603676,0.829050053357545,0.869409257205157,1.18629250529648,1.07016331235885,2.09071047609954,1.58633079776593,1.53288197440768,2.74901956386104,1.01207876807801,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,2.41928091869679,2.13952156626806,1.44824403882799,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1540 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2584 | |||
|TSSclassifier=S | |||
|UniProt=Q9NQC7 | |||
|association_with_transcript=97bp_to_ENST00000398568,NM_001042412,uc002egr.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_CYLD_5end | |||
|id=chr16:50776126..50776135,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.80e-27!140;CL:0002031!4.22e-20!124;CL:0000037!9.85e-20!172;CL:0000566!9.85e-20!172;CL:0000766!3.37e-19!76;CL:0002087!3.82e-18!119;CL:0002032!4.50e-18!165;CL:0000837!4.50e-18!165;CL:0000988!8.35e-18!182;CL:0002057!2.62e-17!42;CL:0000860!6.42e-16!45;CL:0000557!9.32e-15!71;CL:0000839!5.28e-13!70;CL:0002009!1.61e-12!65;CL:0000763!4.74e-12!112;CL:0000049!4.74e-12!112;CL:0002194!2.99e-11!63;CL:0000576!2.99e-11!63;CL:0000040!2.99e-11!63;CL:0000559!2.99e-11!63;CL:0000094!1.91e-08!8;CL:0002393!2.23e-08!9;CL:0002397!2.23e-08!9;CL:0000791!3.89e-08!18;CL:0000789!3.89e-08!18;CL:0002420!3.89e-08!18;CL:0002419!3.89e-08!18;CL:0000790!3.89e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.08e-21;8!CL:0002393;3.86e-20;6!CL:0002397;3.86e-20;6!CL:0000081;2.87e-15;11!CL:0000624;2.36e-14;6!CL:0000766;2.71e-12;69!CL:0000775;1.56e-11;3!CL:0000623;2.03e-11;3!CL:0000791;4.80e-11;18!CL:0000789;4.80e-11;18!CL:0002419;4.80e-11;18!CL:0000576;1.85e-10;48!CL:0000771;9.51e-09;2!CL:0001014;1.42e-08;2!CL:0001016;1.42e-08;2!CL:0002087;4.62e-08;104!CL:0000860;7.35e-08;33!CL:0002057;7.35e-08;33!CL:0000084;1.42e-07;25!CL:0000738;7.17e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-30,136;CL:0000037,6.82e-23,168;CL:0002032,6.94e-23,161;CL:0000837,6.94e-23,161;CL:0000766,9.59e-23,72;CL:0000094,1.28e-21,8;CL:0000988,3.07e-21,177;CL:0002031,9.76e-21,120;CL:0000860,1.62e-18,42;CL:0002057,1.62e-18,42;CL:0002087,1.90e-18,115;CL:0002393,4.03e-17,9;CL:0002397,4.03e-17,9;CL:0000763,5.00e-16,108;CL:0000049,5.00e-16,108;CL:0000473,1.09e-15,48;CL:0000234,1.09e-15,48;CL:0000081,2.02e-15,11;CL:0000557,9.62e-15,67;CL:0002009,1.03e-14,61;CL:0000624,1.53e-14,6;CL:0002194,9.50e-12,59;CL:0000576,9.50e-12,59;CL:0000040,9.50e-12,59;CL:0000559,9.50e-12,59;CL:0000623,1.21e-11,3;CL:0000825,1.21e-11,3;CL:0000839,1.23e-11,66;CL:0000775,1.25e-11,3;CL:0000791,3.94e-11,18;CL:0000789,3.94e-11,18;CL:0002420,3.94e-11,18;CL:0002419,3.94e-11,18;CL:0000790,3.94e-11,18;CL:0000771,9.55e-09,2;CL:0001014,1.38e-08,2;CL:0001016,1.38e-08,2;CL:0000084,1.24e-07,25;CL:0000827,1.24e-07,25;CL:0000134,3.94e-07,354;CL:0000838,4.67e-07,52;CL:0000542,7.05e-07,53;CL:0000051,7.05e-07,53;CL:0002320,8.16e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.18e-13;42!CL:0000790;4.80e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.40e-15!102;UBERON:0003061!3.40e-15!102;UBERON:0002371!1.29e-12!80;UBERON:0002193!1.81e-12!112;UBERON:0001474!3.33e-12!86;UBERON:0004765!1.13e-11!101;UBERON:0001434!1.13e-11!101;UBERON:0002405!8.01e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-12,76;UBERON:0001474,3.31e-11,82;UBERON:0002390,7.90e-11,98;UBERON:0003061,7.90e-11,98;UBERON:0002405,1.67e-10,93;UBERON:0004765,8.26e-10,90;UBERON:0002193,2.30e-09,108;UBERON:0001434,2.19e-08,100 | |||
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| |||
|short_description=p5@CYLD | |||
}} |
Revision as of 10:39, 11 September 2013
Short description: | p5@CYLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CYLD_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 97bp_to_ENST00000398568, NM_001042412, uc002egr.1_5end |
EntrezGene: | CYLD |
HGNC: | 2584 |
UniProt: | Q9NQC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-12 | 76 |
bone element | 3.31e-11 | 82 |
hematopoietic system | 7.90e-11 | 98 |
blood island | 7.90e-11 | 98 |
immune system | 1.67e-10 | 93 |
skeletal element | 8.26e-10 | 90 |
hemolymphoid system | 2.30e-09 | 108 |
skeletal system | 2.19e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.