FFCP PHASE1:Hg19::chr17:60885645..60885656,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=162333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26655|TSSclassifier=S|UniProt=G3V1Q5|association_with_transcript=0bp_to_ENST00000544856_5end|coexpression_cluster_id=C1|description=CAGE_peak_2_at_MARCH10_5end|id=chr17:60885645..60885656,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.42e-13;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.25e-13,1|ontology_enrichment_development_v019=UBERON:0007297;1.50e-07;2!UBERON:0010122;1.99e-07;2!UBERON:0008947;4.18e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.09e-25!115;UBERON:0001049!3.01e-25!57;UBERON:0005068!3.01e-25!57;UBERON:0006241!3.01e-25!57;UBERON:0007135!3.01e-25!57;UBERON:0003075!2.12e-22!86;UBERON:0007284!2.12e-22!86;UBERON:0002346!5.61e-21!90;UBERON:0005743!1.51e-20!86;UBERON:0002616!2.43e-20!59;UBERON:0002780!4.67e-20!41;UBERON:0001890!4.67e-20!41;UBERON:0006240!4.67e-20!41;UBERON:0003080!1.91e-19!42;UBERON:0001017!4.45e-19!82;UBERON:0000955!4.87e-19!69;UBERON:0006238!4.87e-19!69;UBERON:0003056!6.84e-19!61;UBERON:0000153!8.94e-18!129;UBERON:0007811!8.94e-18!129;UBERON:0000073!9.35e-18!94;UBERON:0001016!9.35e-18!94;UBERON:0000033!1.27e-16!123;UBERON:0002020!8.30e-16!34;UBERON:0003528!8.30e-16!34;UBERON:0001893!8.30e-16!34;UBERON:0001869!7.78e-15!32;UBERON:0002791!1.55e-14!33;UBERON:0002308!2.74e-12!9;UBERON:0000125!2.74e-12!9;UBERON:0000025!6.98e-11!194;UBERON:0000369!1.80e-10!4;UBERON:0002435!1.80e-10!4;UBERON:0000204!1.80e-10!4;UBERON:0010082!1.80e-10!4;UBERON:0000475!2.41e-10!365;UBERON:0004121!3.56e-10!169;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0002420!5.56e-09!9;UBERON:0007245!5.56e-09!9;UBERON:0010009!5.56e-09!9;UBERON:0010011!5.56e-09!9;UBERON:0000454!5.56e-09!9;UBERON:0000483!1.44e-08!309;UBERON:0009663!1.49e-08!7;UBERON:0001896!2.22e-08!3;UBERON:0005290!2.22e-08!3;UBERON:0010096!2.22e-08!3;UBERON:0004111!2.28e-08!241;UBERON:0000119!2.32e-08!312;UBERON:0005383!2.50e-08!3;UBERON:0005382!2.50e-08!3;UBERON:0002298!1.53e-07!8;UBERON:0000956!1.73e-07!25;UBERON:0000203!1.73e-07!25;UBERON:0000477!2.13e-07!286;UBERON:0002619!3.29e-07!22;UBERON:0003076!5.26e-07!15;UBERON:0003057!5.26e-07!15|ontology_enrichment_uberon_v019=UBERON:0000007;3.82e-26;2!UBERON:0001896;2.95e-17;3!UBERON:0005290;2.95e-17;3!UBERON:0002336;8.05e-14;1!UBERON:0001301;8.05e-14;1!UBERON:0011215;8.05e-14;1!UBERON:0001018;8.05e-14;1!UBERON:0002473;8.05e-14;1!UBERON:0005340;8.05e-14;1!UBERON:0003544;8.05e-14;1!UBERON:0005970;8.05e-14;1!UBERON:0002316;8.05e-14;1!UBERON:0001020;8.05e-14;1!UBERON:0002437;8.05e-14;1!UBERON:0003296;1.38e-13;4!UBERON:0010133;1.38e-13;4!UBERON:0003135;5.24e-11;11!UBERON:0002298;4.20e-09;6!UBERON:0000073;1.98e-08;53!UBERON:0002616;1.98e-08;53!UBERON:0001894;3.77e-08;7!UBERON:0003127;1.32e-07;2!UBERON:0005162;1.50e-07;2!UBERON:0000122;1.50e-07;2!UBERON:0000341;1.99e-07;2!UBERON:0001873;1.99e-07;2!UBERON:0000473;2.37e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.08e-26,2;UBERON:0001896,2.95e-17,3;UBERON:0005290,2.95e-17,3;UBERON:0010096,2.95e-17,3;UBERON:0007023,3.21e-14,114;UBERON:0001301,7.55e-14,1;UBERON:0002336,8.58e-14,1;UBERON:0011215,8.58e-14,1;UBERON:0001018,8.58e-14,1;UBERON:0002473,8.58e-14,1;UBERON:0005340,8.58e-14,1;UBERON:0003544,8.58e-14,1;UBERON:0005970,8.58e-14,1;UBERON:0002316,8.58e-14,1;UBERON:0001020,8.58e-14,1;UBERON:0002437,8.58e-14,1;UBERON:0003296,1.43e-13,4;UBERON:0010133,1.43e-13,4;UBERON:0003135,5.15e-11,11;UBERON:0001049,5.00e-10,56;UBERON:0005068,5.00e-10,56;UBERON:0006241,5.00e-10,56;UBERON:0007135,5.00e-10,56;UBERON:0002298,4.20e-09,6;UBERON:0001894,3.84e-08,7;UBERON:0006222,3.84e-08,7;UBERON:0000073,6.46e-08,53;UBERON:0002616,6.46e-08,53;UBERON:0003076,6.52e-08,15;UBERON:0003057,6.52e-08,15;UBERON:0003127,1.28e-07,2;UBERON:0005162,1.54e-07,2;UBERON:0000122,1.54e-07,2;UBERON:0000341,1.75e-07,2;UBERON:0001873,2.25e-07,2;UBERON:0010122,2.25e-07,2;UBERON:0000473,2.37e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,6.81091192588106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.539107359730903,0,0,0,0,0,0,0,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=162333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26655 | |||
|TSSclassifier=S | |||
|UniProt=G3V1Q5 | |||
|association_with_transcript=0bp_to_ENST00000544856_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_MARCH10_5end | |||
|id=chr17:60885645..60885656,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.42e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.25e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.50e-07;2!UBERON:0010122;1.99e-07;2!UBERON:0008947;4.18e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-25!115;UBERON:0001049!3.01e-25!57;UBERON:0005068!3.01e-25!57;UBERON:0006241!3.01e-25!57;UBERON:0007135!3.01e-25!57;UBERON:0003075!2.12e-22!86;UBERON:0007284!2.12e-22!86;UBERON:0002346!5.61e-21!90;UBERON:0005743!1.51e-20!86;UBERON:0002616!2.43e-20!59;UBERON:0002780!4.67e-20!41;UBERON:0001890!4.67e-20!41;UBERON:0006240!4.67e-20!41;UBERON:0003080!1.91e-19!42;UBERON:0001017!4.45e-19!82;UBERON:0000955!4.87e-19!69;UBERON:0006238!4.87e-19!69;UBERON:0003056!6.84e-19!61;UBERON:0000153!8.94e-18!129;UBERON:0007811!8.94e-18!129;UBERON:0000073!9.35e-18!94;UBERON:0001016!9.35e-18!94;UBERON:0000033!1.27e-16!123;UBERON:0002020!8.30e-16!34;UBERON:0003528!8.30e-16!34;UBERON:0001893!8.30e-16!34;UBERON:0001869!7.78e-15!32;UBERON:0002791!1.55e-14!33;UBERON:0002308!2.74e-12!9;UBERON:0000125!2.74e-12!9;UBERON:0000025!6.98e-11!194;UBERON:0000369!1.80e-10!4;UBERON:0002435!1.80e-10!4;UBERON:0000204!1.80e-10!4;UBERON:0010082!1.80e-10!4;UBERON:0000475!2.41e-10!365;UBERON:0004121!3.56e-10!169;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0002420!5.56e-09!9;UBERON:0007245!5.56e-09!9;UBERON:0010009!5.56e-09!9;UBERON:0010011!5.56e-09!9;UBERON:0000454!5.56e-09!9;UBERON:0000483!1.44e-08!309;UBERON:0009663!1.49e-08!7;UBERON:0001896!2.22e-08!3;UBERON:0005290!2.22e-08!3;UBERON:0010096!2.22e-08!3;UBERON:0004111!2.28e-08!241;UBERON:0000119!2.32e-08!312;UBERON:0005383!2.50e-08!3;UBERON:0005382!2.50e-08!3;UBERON:0002298!1.53e-07!8;UBERON:0000956!1.73e-07!25;UBERON:0000203!1.73e-07!25;UBERON:0000477!2.13e-07!286;UBERON:0002619!3.29e-07!22;UBERON:0003076!5.26e-07!15;UBERON:0003057!5.26e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.82e-26;2!UBERON:0001896;2.95e-17;3!UBERON:0005290;2.95e-17;3!UBERON:0002336;8.05e-14;1!UBERON:0001301;8.05e-14;1!UBERON:0011215;8.05e-14;1!UBERON:0001018;8.05e-14;1!UBERON:0002473;8.05e-14;1!UBERON:0005340;8.05e-14;1!UBERON:0003544;8.05e-14;1!UBERON:0005970;8.05e-14;1!UBERON:0002316;8.05e-14;1!UBERON:0001020;8.05e-14;1!UBERON:0002437;8.05e-14;1!UBERON:0003296;1.38e-13;4!UBERON:0010133;1.38e-13;4!UBERON:0003135;5.24e-11;11!UBERON:0002298;4.20e-09;6!UBERON:0000073;1.98e-08;53!UBERON:0002616;1.98e-08;53!UBERON:0001894;3.77e-08;7!UBERON:0003127;1.32e-07;2!UBERON:0005162;1.50e-07;2!UBERON:0000122;1.50e-07;2!UBERON:0000341;1.99e-07;2!UBERON:0001873;1.99e-07;2!UBERON:0000473;2.37e-07;8 | |||
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|short_description=p2@MARCH10 | |||
}} |
Revision as of 14:57, 11 September 2013
Short description: | p2@MARCH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MARCH10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000544856_5end |
EntrezGene: | MARCH10 |
HGNC: | 26655 |
UniProt: | G3V1Q5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.25e-13 | 1 |
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