FFCP PHASE1:Hg19::chr17:76837499..76837540,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C475|description=CAGE_peak_at_chr17:76837499..76837540,-|id=chr17:76837499..76837540,-|ontology_enrichment_celltype=CL:0000738!2.58e-48!140;CL:0000037!5.93e-46!172;CL:0000566!5.93e-46!172;CL:0000988!4.24e-43!182;CL:0002032!4.59e-42!165;CL:0000837!4.59e-42!165;CL:0002087!1.52e-39!119;CL:0002031!1.43e-38!124;CL:0000766!3.04e-37!76;CL:0000557!2.08e-35!71;CL:0002009!1.21e-34!65;CL:0000860!1.27e-34!45;CL:0000763!1.64e-34!112;CL:0000049!1.64e-34!112;CL:0002057!6.81e-34!42;CL:0002194!3.48e-33!63;CL:0000576!3.48e-33!63;CL:0000040!3.48e-33!63;CL:0000559!3.48e-33!63;CL:0000839!2.39e-31!70;CL:0000134!2.82e-15!358;CL:0002320!5.39e-14!365;CL:0000219!3.67e-13!390;CL:0002393!1.62e-09!9;CL:0002397!1.62e-09!9;CL:0000451!1.83e-08!10;CL:0000838!6.50e-08!52;CL:0000542!1.48e-07!53;CL:0000051!1.48e-07!53;CL:0000048!5.92e-07!430;CL:0000990!6.30e-07!8;CL:0000034!8.83e-07!444|ontology_enrichment_celltype_v019=CL:0000860;3.78e-68;33!CL:0002057;3.78e-68;33!CL:0000576;5.06e-57;48!CL:0000473;8.94e-50;39!CL:0000234;8.94e-50;39!CL:0000766;6.38e-37;69!CL:0002087;3.03e-18;104!CL:0000763;5.36e-18;100!CL:0002393;2.05e-17;6!CL:0002397;2.05e-17;6!CL:0000738;3.83e-16;136!CL:0000840;1.83e-13;5!CL:0000451;8.34e-13;10!CL:0000988;1.26e-09;177!CL:0000875;1.42e-09;3!CL:0002396;1.42e-09;3!CL:0000990;9.20e-09;8!CL:0000767;1.67e-08;3!CL:0000784;2.74e-08;3!CL:0000226;5.60e-08;3!CL:0000842;5.60e-08;3!CL:0000094;1.12e-07;8!CL:0000219;3.67e-07;193|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-100,42;CL:0002057,2.90e-100,42;CL:0002009,9.78e-96,61;CL:0000557,1.32e-93,67;CL:0000766,1.81e-93,72;CL:0002194,2.39e-91,59;CL:0000576,2.39e-91,59;CL:0000040,2.39e-91,59;CL:0000559,2.39e-91,59;CL:0000473,2.99e-90,48;CL:0000234,2.99e-90,48;CL:0000839,9.92e-84,66;CL:0000738,1.74e-68,136;CL:0000763,5.95e-68,108;CL:0000049,5.95e-68,108;CL:0000037,1.29e-58,168;CL:0002087,1.04e-57,115;CL:0000988,8.28e-55,177;CL:0002031,1.70e-54,120;CL:0002032,1.56e-49,161;CL:0000837,1.56e-49,161;CL:0002393,2.77e-25,9;CL:0002397,2.77e-25,9;CL:0000134,6.20e-21,354;CL:0002320,3.34e-20,361;CL:0000219,1.90e-18,386;CL:0000034,5.58e-15,441;CL:0000048,1.72e-14,427;CL:0000723,4.66e-14,433;CL:0000840,1.13e-13,5;CL:0001029,1.13e-13,5;CL:0000451,6.53e-13,10;CL:0000875,1.43e-09,3;CL:0002396,1.43e-09,3;CL:0000990,6.75e-09,8;CL:0000767,1.49e-08,3;CL:0000784,2.42e-08,3;CL:0000226,4.89e-08,3;CL:0000842,4.89e-08,3;CL:0000094,9.78e-08,8|ontology_enrichment_development_v019=CL:0002057;2.24e-72;42!CL:0000049;5.21e-19;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.23e-33!80;UBERON:0001474!5.13e-33!86;UBERON:0002390!2.14e-32!102;UBERON:0003061!2.14e-32!102;UBERON:0002193!4.67e-28!112;UBERON:0002405!1.50e-26!115;UBERON:0004765!2.03e-24!101;UBERON:0001434!2.03e-24!101;UBERON:0002384!1.45e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.61e-88,76;UBERON:0001474,2.21e-80,82;UBERON:0002390,4.01e-76,98;UBERON:0003061,4.01e-76,98;UBERON:0004765,5.05e-72,90;UBERON:0002405,2.96e-69,93;UBERON:0002193,9.81e-68,108;UBERON:0001434,1.94e-63,100;UBERON:0002204,2.41e-32,167;UBERON:0003081,4.04e-29,203;UBERON:0002384,4.63e-20,371;UBERON:0000926,1.37e-13,315;UBERON:0004120,1.37e-13,315;UBERON:0006603,1.37e-13,315|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,3.93364276848904,3.45446458287491,6.65709330259127,0,0,0,0,0.142169232487422,4.9912074686924,13.8498852132969,11.4310335057981,11.5015761479401,0.223915474239924,0,0.257575567634187,3.48955773070955,2.64513160582167,2.66842467306598,6.27558399645349,6.57868620834921,4.95530193432166,6.04154023876516,5.12321413058201,3.31075121844019,9.3081333798887,3.87290810150296,12.1883837934908,6.40023954444856,4.63940455098338,4.26974620445661,4.89734227793444,7.38136762275015,9.59005688698562,2.96866170168044,4.3882004676759,0,4.93355705668593,5.6738522469114,4.35975574296902,5.02497330513487,5.73631210262222,7.16723187526885,4.84319602106695,6.2607198117886,4.74693581161327,7.6051903072299,11.0554235981823,11.3215668574523,7.52601828681517,4.05477610672067,4.98249318760948,17.1007646244749,10.3436672143527,10.2291926108195,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0.574752439954483,0,0,2.84606484554724,1.76171156811282,1.14681968437569,2.64342657158052,1.68152568894461,0.790152254325231,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0,0.889719378972363,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0.50603938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377,0,0.487671699929078,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.322289439867886,0.999411559249289,0.178553938605658,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.506794004045748,0.203977659483963,0.534434810531121,0.0918948995348449,0,0,0,0,0,0.639701945702943,0,0,0.248298857183432,0,0,0,0,0,0.26940821205835,0,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0.320568492303233|short_description=p@chr17:76837499..76837540,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C475 | |||
|description=CAGE_peak_at_chr17:76837499..76837540,- | |||
|id=chr17:76837499..76837540,- | |||
|ontology_enrichment_celltype=CL:0000738!2.58e-48!140;CL:0000037!5.93e-46!172;CL:0000566!5.93e-46!172;CL:0000988!4.24e-43!182;CL:0002032!4.59e-42!165;CL:0000837!4.59e-42!165;CL:0002087!1.52e-39!119;CL:0002031!1.43e-38!124;CL:0000766!3.04e-37!76;CL:0000557!2.08e-35!71;CL:0002009!1.21e-34!65;CL:0000860!1.27e-34!45;CL:0000763!1.64e-34!112;CL:0000049!1.64e-34!112;CL:0002057!6.81e-34!42;CL:0002194!3.48e-33!63;CL:0000576!3.48e-33!63;CL:0000040!3.48e-33!63;CL:0000559!3.48e-33!63;CL:0000839!2.39e-31!70;CL:0000134!2.82e-15!358;CL:0002320!5.39e-14!365;CL:0000219!3.67e-13!390;CL:0002393!1.62e-09!9;CL:0002397!1.62e-09!9;CL:0000451!1.83e-08!10;CL:0000838!6.50e-08!52;CL:0000542!1.48e-07!53;CL:0000051!1.48e-07!53;CL:0000048!5.92e-07!430;CL:0000990!6.30e-07!8;CL:0000034!8.83e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-68;33!CL:0002057;3.78e-68;33!CL:0000576;5.06e-57;48!CL:0000473;8.94e-50;39!CL:0000234;8.94e-50;39!CL:0000766;6.38e-37;69!CL:0002087;3.03e-18;104!CL:0000763;5.36e-18;100!CL:0002393;2.05e-17;6!CL:0002397;2.05e-17;6!CL:0000738;3.83e-16;136!CL:0000840;1.83e-13;5!CL:0000451;8.34e-13;10!CL:0000988;1.26e-09;177!CL:0000875;1.42e-09;3!CL:0002396;1.42e-09;3!CL:0000990;9.20e-09;8!CL:0000767;1.67e-08;3!CL:0000784;2.74e-08;3!CL:0000226;5.60e-08;3!CL:0000842;5.60e-08;3!CL:0000094;1.12e-07;8!CL:0000219;3.67e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-100,42;CL:0002057,2.90e-100,42;CL:0002009,9.78e-96,61;CL:0000557,1.32e-93,67;CL:0000766,1.81e-93,72;CL:0002194,2.39e-91,59;CL:0000576,2.39e-91,59;CL:0000040,2.39e-91,59;CL:0000559,2.39e-91,59;CL:0000473,2.99e-90,48;CL:0000234,2.99e-90,48;CL:0000839,9.92e-84,66;CL:0000738,1.74e-68,136;CL:0000763,5.95e-68,108;CL:0000049,5.95e-68,108;CL:0000037,1.29e-58,168;CL:0002087,1.04e-57,115;CL:0000988,8.28e-55,177;CL:0002031,1.70e-54,120;CL:0002032,1.56e-49,161;CL:0000837,1.56e-49,161;CL:0002393,2.77e-25,9;CL:0002397,2.77e-25,9;CL:0000134,6.20e-21,354;CL:0002320,3.34e-20,361;CL:0000219,1.90e-18,386;CL:0000034,5.58e-15,441;CL:0000048,1.72e-14,427;CL:0000723,4.66e-14,433;CL:0000840,1.13e-13,5;CL:0001029,1.13e-13,5;CL:0000451,6.53e-13,10;CL:0000875,1.43e-09,3;CL:0002396,1.43e-09,3;CL:0000990,6.75e-09,8;CL:0000767,1.49e-08,3;CL:0000784,2.42e-08,3;CL:0000226,4.89e-08,3;CL:0000842,4.89e-08,3;CL:0000094,9.78e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-72;42!CL:0000049;5.21e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.23e-33!80;UBERON:0001474!5.13e-33!86;UBERON:0002390!2.14e-32!102;UBERON:0003061!2.14e-32!102;UBERON:0002193!4.67e-28!112;UBERON:0002405!1.50e-26!115;UBERON:0004765!2.03e-24!101;UBERON:0001434!2.03e-24!101;UBERON:0002384!1.45e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.61e-88,76;UBERON:0001474,2.21e-80,82;UBERON:0002390,4.01e-76,98;UBERON:0003061,4.01e-76,98;UBERON:0004765,5.05e-72,90;UBERON:0002405,2.96e-69,93;UBERON:0002193,9.81e-68,108;UBERON:0001434,1.94e-63,100;UBERON:0002204,2.41e-32,167;UBERON:0003081,4.04e-29,203;UBERON:0002384,4.63e-20,371;UBERON:0000926,1.37e-13,315;UBERON:0004120,1.37e-13,315;UBERON:0006603,1.37e-13,315 | |||
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| |||
|short_description=p@chr17:76837499..76837540,- | |||
}} |
Revision as of 16:08, 11 September 2013
Short description: | p@chr17:76837499..76837540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76837499..76837540, - |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.61e-88 | 76 |
bone element | 2.21e-80 | 82 |
hematopoietic system | 4.01e-76 | 98 |
blood island | 4.01e-76 | 98 |
skeletal element | 5.05e-72 | 90 |
immune system | 2.96e-69 | 93 |
hemolymphoid system | 9.81e-68 | 108 |
skeletal system | 1.94e-63 | 100 |
musculoskeletal system | 2.41e-32 | 167 |
lateral plate mesoderm | 4.04e-29 | 203 |
connective tissue | 4.63e-20 | 371 |
mesoderm | 1.37e-13 | 315 |
mesoderm-derived structure | 1.37e-13 | 315 |
presumptive mesoderm | 1.37e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.