FFCP PHASE1:Hg19::chr17:80818231..80818262,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:80818231..80818262,+|id=chr17:80818231..80818262,+|ontology_enrichment_celltype=CL:0000738!4.14e-34!140;CL:0000037!1.36e-28!172;CL:0000566!1.36e-28!172;CL:0000988!1.38e-27!182;CL:0002031!2.94e-27!124;CL:0002032!2.39e-26!165;CL:0000837!2.39e-26!165;CL:0002087!3.64e-26!119;CL:0000766!4.70e-24!76;CL:0000557!8.79e-23!71;CL:0000839!2.10e-21!70;CL:0002057!1.37e-20!42;CL:0002009!7.93e-20!65;CL:0000763!3.61e-19!112;CL:0000049!3.61e-19!112;CL:0002194!4.59e-19!63;CL:0000576!4.59e-19!63;CL:0000040!4.59e-19!63;CL:0000559!4.59e-19!63;CL:0000860!3.11e-18!45;CL:1000507!1.06e-07!12;CL:1000494!1.06e-07!12;CL:1000449!1.69e-07!16;CL:0002393!4.77e-07!9;CL:0002397!4.77e-07!9;CL:0000542!4.99e-07!53;CL:0000051!4.99e-07!53|ontology_enrichment_celltype_v019=CL:0000576;2.56e-12;48!CL:0000766;2.13e-11;69!CL:0000473;1.26e-10;39!CL:0000234;1.26e-10;39!CL:1000449;3.38e-09;15!CL:1000507;7.19e-09;10!CL:1000494;7.19e-09;10!CL:0000860;9.28e-09;33!CL:0002057;9.28e-09;33!CL:1000497;6.68e-08;17!CL:0002518;6.68e-08;17!CL:0002393;8.60e-08;6!CL:0002397;8.60e-08;6!CL:0000097;1.32e-07;5!CL:0002681;2.82e-07;12!CL:0002584;2.82e-07;12|ontology_enrichment_celltype_v019_2=CL:0000766,9.43e-25,72;CL:0000839,4.70e-21,66;CL:0000738,9.83e-21,136;CL:0000557,1.31e-20,67;CL:0000763,6.92e-19,108;CL:0000049,6.92e-19,108;CL:0002032,1.36e-18,161;CL:0000837,1.36e-18,161;CL:0000988,1.98e-18,177;CL:0000037,3.94e-18,168;CL:0000473,5.65e-18,48;CL:0000234,5.65e-18,48;CL:0002194,2.58e-17,59;CL:0000576,2.58e-17,59;CL:0000040,2.58e-17,59;CL:0000559,2.58e-17,59;CL:0002031,6.97e-17,120;CL:0002009,1.66e-16,61;CL:0002087,2.25e-15,115;CL:0000860,3.99e-14,42;CL:0002057,3.99e-14,42;CL:1000449,4.97e-09,15;CL:1000507,9.81e-09,10;CL:1000494,9.81e-09,10;CL:1000497,9.31e-08,17;CL:0002518,9.31e-08,17;CL:0000097,1.11e-07,5;CL:0002028,1.11e-07,5;CL:0002681,4.00e-07,12;CL:0002584,4.00e-07,12;CL:0002393,5.62e-07,9;CL:0002397,5.62e-07,9;CL:0002619,8.25e-07,3|ontology_enrichment_development_v019=CL:0002057;1.09e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.93e-24!112;UBERON:0002390!2.72e-23!102;UBERON:0003061!2.72e-23!102;UBERON:0001474!1.05e-20!86;UBERON:0002371!2.52e-20!80;UBERON:0004765!1.94e-16!101;UBERON:0001434!1.94e-16!101;UBERON:0002405!8.06e-16!115;UBERON:0003081!1.45e-14!216;UBERON:0003887!3.06e-09!21;UBERON:0000080!4.00e-09!18;UBERON:0002120!4.00e-09!18;UBERON:0004875!4.00e-09!18;UBERON:0005721!4.00e-09!18;UBERON:0005754!4.00e-09!18;UBERON:0007297!4.00e-09!18;UBERON:0006555!2.75e-08!17;UBERON:0005103!2.75e-08!17;UBERON:0000083!2.75e-08!17;UBERON:0009201!2.75e-08!17;UBERON:0004819!2.75e-08!17;UBERON:0006553!2.75e-08!17;UBERON:0003074!2.75e-08!17;UBERON:0003060!2.75e-08!17;UBERON:0000058!3.59e-08!26;UBERON:0009773!1.06e-07!12;UBERON:0001231!1.06e-07!12;UBERON:0004810!1.06e-07!12;UBERON:0004876!1.11e-07!20;UBERON:0004211!1.69e-07!16;UBERON:0001285!1.69e-07!16;UBERON:0007684!1.69e-07!16;UBERON:0003220!1.69e-07!16;UBERON:0004208!1.69e-07!16|ontology_enrichment_uberon_v019=UBERON:0006555;3.38e-09;15!UBERON:0004819;3.38e-09;15!UBERON:0001285;3.38e-09;15!UBERON:0007684;3.38e-09;15!UBERON:0004211;7.19e-09;10!UBERON:0009773;7.19e-09;10!UBERON:0001231;7.19e-09;10!UBERON:0004810;7.19e-09;10!UBERON:0006947;1.24e-07;3!UBERON:0004054;1.24e-07;3!UBERON:0001225;2.82e-07;12!UBERON:0008987;2.82e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.90e-18,82;UBERON:0002390,1.14e-17,98;UBERON:0003061,1.14e-17,98;UBERON:0002371,3.85e-17,76;UBERON:0002193,3.68e-16,108;UBERON:0004765,1.05e-15,90;UBERON:0002405,1.22e-15,93;UBERON:0001434,3.09e-13,100;UBERON:0006555,1.64e-10,16;UBERON:0004819,1.64e-10,16;UBERON:0004211,4.97e-09,15;UBERON:0009773,4.97e-09,15;UBERON:0001231,4.97e-09,15;UBERON:0001285,4.97e-09,15;UBERON:0007684,4.97e-09,15;UBERON:0004208,4.97e-09,15;UBERON:0004810,9.81e-09,10;UBERON:0002113,1.98e-08,26;UBERON:0003918,1.98e-08,26;UBERON:0011143,1.98e-08,26;UBERON:0005095,1.98e-08,26;UBERON:0007687,1.98e-08,26;UBERON:0000080,6.80e-08,9;UBERON:0002120,6.80e-08,9;UBERON:0004875,6.80e-08,9;UBERON:0005721,6.80e-08,9;UBERON:0005754,6.80e-08,9;UBERON:0007297,6.80e-08,9;UBERON:0006947,1.02e-07,3;UBERON:0004054,1.02e-07,3;UBERON:0000058,1.25e-07,19;UBERON:0003081,2.20e-07,203;UBERON:0001225,4.00e-07,12;UBERON:0008987,4.00e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.821246550437305,0.125542639594803,3.89708369314551,2.79142004129816,2.51874500203774,1.96682138424452,1.53531759238885,1.23852898652861,0,0.30120591877825,0,0,0,0.293600439334847,1.10799081706375,0.601633342410425,1.08505435357926,1.56740831967947,1.94336199611388,3.09090681161024,2.03557534291391,0,0.970336244751265,1.16214518452842,0.411167888021826,1.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:80818231..80818262,+ | |||
|id=chr17:80818231..80818262,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.14e-34!140;CL:0000037!1.36e-28!172;CL:0000566!1.36e-28!172;CL:0000988!1.38e-27!182;CL:0002031!2.94e-27!124;CL:0002032!2.39e-26!165;CL:0000837!2.39e-26!165;CL:0002087!3.64e-26!119;CL:0000766!4.70e-24!76;CL:0000557!8.79e-23!71;CL:0000839!2.10e-21!70;CL:0002057!1.37e-20!42;CL:0002009!7.93e-20!65;CL:0000763!3.61e-19!112;CL:0000049!3.61e-19!112;CL:0002194!4.59e-19!63;CL:0000576!4.59e-19!63;CL:0000040!4.59e-19!63;CL:0000559!4.59e-19!63;CL:0000860!3.11e-18!45;CL:1000507!1.06e-07!12;CL:1000494!1.06e-07!12;CL:1000449!1.69e-07!16;CL:0002393!4.77e-07!9;CL:0002397!4.77e-07!9;CL:0000542!4.99e-07!53;CL:0000051!4.99e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.56e-12;48!CL:0000766;2.13e-11;69!CL:0000473;1.26e-10;39!CL:0000234;1.26e-10;39!CL:1000449;3.38e-09;15!CL:1000507;7.19e-09;10!CL:1000494;7.19e-09;10!CL:0000860;9.28e-09;33!CL:0002057;9.28e-09;33!CL:1000497;6.68e-08;17!CL:0002518;6.68e-08;17!CL:0002393;8.60e-08;6!CL:0002397;8.60e-08;6!CL:0000097;1.32e-07;5!CL:0002681;2.82e-07;12!CL:0002584;2.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.43e-25,72;CL:0000839,4.70e-21,66;CL:0000738,9.83e-21,136;CL:0000557,1.31e-20,67;CL:0000763,6.92e-19,108;CL:0000049,6.92e-19,108;CL:0002032,1.36e-18,161;CL:0000837,1.36e-18,161;CL:0000988,1.98e-18,177;CL:0000037,3.94e-18,168;CL:0000473,5.65e-18,48;CL:0000234,5.65e-18,48;CL:0002194,2.58e-17,59;CL:0000576,2.58e-17,59;CL:0000040,2.58e-17,59;CL:0000559,2.58e-17,59;CL:0002031,6.97e-17,120;CL:0002009,1.66e-16,61;CL:0002087,2.25e-15,115;CL:0000860,3.99e-14,42;CL:0002057,3.99e-14,42;CL:1000449,4.97e-09,15;CL:1000507,9.81e-09,10;CL:1000494,9.81e-09,10;CL:1000497,9.31e-08,17;CL:0002518,9.31e-08,17;CL:0000097,1.11e-07,5;CL:0002028,1.11e-07,5;CL:0002681,4.00e-07,12;CL:0002584,4.00e-07,12;CL:0002393,5.62e-07,9;CL:0002397,5.62e-07,9;CL:0002619,8.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.93e-24!112;UBERON:0002390!2.72e-23!102;UBERON:0003061!2.72e-23!102;UBERON:0001474!1.05e-20!86;UBERON:0002371!2.52e-20!80;UBERON:0004765!1.94e-16!101;UBERON:0001434!1.94e-16!101;UBERON:0002405!8.06e-16!115;UBERON:0003081!1.45e-14!216;UBERON:0003887!3.06e-09!21;UBERON:0000080!4.00e-09!18;UBERON:0002120!4.00e-09!18;UBERON:0004875!4.00e-09!18;UBERON:0005721!4.00e-09!18;UBERON:0005754!4.00e-09!18;UBERON:0007297!4.00e-09!18;UBERON:0006555!2.75e-08!17;UBERON:0005103!2.75e-08!17;UBERON:0000083!2.75e-08!17;UBERON:0009201!2.75e-08!17;UBERON:0004819!2.75e-08!17;UBERON:0006553!2.75e-08!17;UBERON:0003074!2.75e-08!17;UBERON:0003060!2.75e-08!17;UBERON:0000058!3.59e-08!26;UBERON:0009773!1.06e-07!12;UBERON:0001231!1.06e-07!12;UBERON:0004810!1.06e-07!12;UBERON:0004876!1.11e-07!20;UBERON:0004211!1.69e-07!16;UBERON:0001285!1.69e-07!16;UBERON:0007684!1.69e-07!16;UBERON:0003220!1.69e-07!16;UBERON:0004208!1.69e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.38e-09;15!UBERON:0004819;3.38e-09;15!UBERON:0001285;3.38e-09;15!UBERON:0007684;3.38e-09;15!UBERON:0004211;7.19e-09;10!UBERON:0009773;7.19e-09;10!UBERON:0001231;7.19e-09;10!UBERON:0004810;7.19e-09;10!UBERON:0006947;1.24e-07;3!UBERON:0004054;1.24e-07;3!UBERON:0001225;2.82e-07;12!UBERON:0008987;2.82e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.90e-18,82;UBERON:0002390,1.14e-17,98;UBERON:0003061,1.14e-17,98;UBERON:0002371,3.85e-17,76;UBERON:0002193,3.68e-16,108;UBERON:0004765,1.05e-15,90;UBERON:0002405,1.22e-15,93;UBERON:0001434,3.09e-13,100;UBERON:0006555,1.64e-10,16;UBERON:0004819,1.64e-10,16;UBERON:0004211,4.97e-09,15;UBERON:0009773,4.97e-09,15;UBERON:0001231,4.97e-09,15;UBERON:0001285,4.97e-09,15;UBERON:0007684,4.97e-09,15;UBERON:0004208,4.97e-09,15;UBERON:0004810,9.81e-09,10;UBERON:0002113,1.98e-08,26;UBERON:0003918,1.98e-08,26;UBERON:0011143,1.98e-08,26;UBERON:0005095,1.98e-08,26;UBERON:0007687,1.98e-08,26;UBERON:0000080,6.80e-08,9;UBERON:0002120,6.80e-08,9;UBERON:0004875,6.80e-08,9;UBERON:0005721,6.80e-08,9;UBERON:0005754,6.80e-08,9;UBERON:0007297,6.80e-08,9;UBERON:0006947,1.02e-07,3;UBERON:0004054,1.02e-07,3;UBERON:0000058,1.25e-07,19;UBERON:0003081,2.20e-07,203;UBERON:0001225,4.00e-07,12;UBERON:0008987,4.00e-07,12 | |||
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| |||
|short_description=p@chr17:80818231..80818262,+ | |||
}} |
Revision as of 16:39, 11 September 2013
Short description: | p@chr17:80818231..80818262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80818231..80818262, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 3.90e-18 | 82 |
hematopoietic system | 1.14e-17 | 98 |
blood island | 1.14e-17 | 98 |
bone marrow | 3.85e-17 | 76 |
hemolymphoid system | 3.68e-16 | 108 |
skeletal element | 1.05e-15 | 90 |
immune system | 1.22e-15 | 93 |
skeletal system | 3.09e-13 | 100 |
excretory tube | 1.64e-10 | 16 |
kidney epithelium | 1.64e-10 | 16 |
nephron epithelium | 4.97e-09 | 15 |
renal tubule | 4.97e-09 | 15 |
nephron tubule | 4.97e-09 | 15 |
nephron | 4.97e-09 | 15 |
uriniferous tubule | 4.97e-09 | 15 |
nephrogenic mesenchyme | 4.97e-09 | 15 |
nephron tubule epithelium | 9.81e-09 | 10 |
kidney | 1.98e-08 | 26 |
kidney mesenchyme | 1.98e-08 | 26 |
upper urinary tract | 1.98e-08 | 26 |
kidney rudiment | 1.98e-08 | 26 |
kidney field | 1.98e-08 | 26 |
mesonephros | 6.80e-08 | 9 |
pronephros | 6.80e-08 | 9 |
nephrogenic cord | 6.80e-08 | 9 |
pronephric mesoderm | 6.80e-08 | 9 |
rostral part of nephrogenic cord | 6.80e-08 | 9 |
presumptive pronephric mesoderm | 6.80e-08 | 9 |
male genital duct | 1.02e-07 | 3 |
internal male genitalia | 1.02e-07 | 3 |
duct | 1.25e-07 | 19 |
lateral plate mesoderm | 2.20e-07 | 203 |
cortex of kidney | 4.00e-07 | 12 |
renal parenchyma | 4.00e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.