FFCP PHASE1:Hg19::chr19:49243830..49243844,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54922|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24716|TSSclassifier=S|UniProt=Q5U651,Q7L251,Q8IUR2|association_with_transcript=125bp_to_ENST00000222145,NM_017805,uc002pki.2_5end|coexpression_cluster_id=C140|description=CAGE_peak_3_at_RASIP1_5end|id=chr19:49243830..49243844,-|ontology_enrichment_celltype=CL:0002139!5.66e-31!24;CL:0000115!1.24e-28!35;CL:0000071!5.50e-24!18;CL:0002546!5.50e-24!18;CL:0002078!2.07e-20!44;CL:0000213!2.61e-13!57;CL:0000215!2.61e-13!57;CL:1000413!6.62e-13!9;CL:0002544!4.57e-09!6;CL:0002543!6.52e-09!6;CL:0005020!1.59e-08!6;CL:0002138!1.59e-08!6;CL:0005022!1.59e-08!6|ontology_enrichment_celltype_v019=CL:0002139;2.25e-40;24!CL:0000115;1.32e-33;36!CL:0000071;3.80e-31;18!CL:0002078;3.53e-19;45!CL:1000413;1.64e-16;9!CL:0000213;2.88e-13;58!CL:0000215;2.88e-13;58!CL:0002544;1.88e-11;6!CL:0002543;2.95e-11;6!CL:0002138;9.86e-11;6|ontology_enrichment_celltype_v019_2=CL:0002139,2.35e-40,24;CL:0000115,5.93e-40,36;CL:0000071,4.00e-31,18;CL:0002546,4.00e-31,18;CL:0002078,8.81e-30,45;CL:0000213,9.22e-21,58;CL:0000215,9.22e-21,58;CL:1000413,1.68e-16,9;CL:0002544,1.91e-11,6;CL:0002543,3.04e-11,6;CL:0005020,9.80e-11,6;CL:0002138,9.80e-11,6;CL:0005022,9.80e-11,6|ontology_enrichment_development_v019=CL:0002546;3.80e-31;18!CL:0005022;9.86e-11;6!UBERON:0004872;2.83e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.60e-68!115;UBERON:0004111!6.42e-32!241;UBERON:0000025!5.81e-28!194;UBERON:0000477!9.42e-28!286;UBERON:0001049!1.90e-26!57;UBERON:0005068!1.90e-26!57;UBERON:0006241!1.90e-26!57;UBERON:0007135!1.90e-26!57;UBERON:0001986!5.50e-24!18;UBERON:0004638!5.50e-24!18;UBERON:0004852!5.50e-24!18;UBERON:0003080!2.45e-21!42;UBERON:0002616!5.34e-21!59;UBERON:0002780!2.77e-20!41;UBERON:0001890!2.77e-20!41;UBERON:0006240!2.77e-20!41;UBERON:0003075!7.22e-20!86;UBERON:0007284!7.22e-20!86;UBERON:0002020!3.86e-19!34;UBERON:0003528!3.86e-19!34;UBERON:0001893!7.49e-19!34;UBERON:0001017!2.33e-18!82;UBERON:0000487!2.52e-18!22;UBERON:0002346!2.74e-18!90;UBERON:0002791!2.83e-18!33;UBERON:0005743!6.79e-18!86;UBERON:0000955!1.01e-17!69;UBERON:0006238!1.01e-17!69;UBERON:0001869!2.02e-17!32;UBERON:0002619!1.51e-15!22;UBERON:0000483!2.28e-15!309;UBERON:0006914!2.66e-15!25;UBERON:0000119!6.14e-15!312;UBERON:0000073!7.80e-15!94;UBERON:0001016!7.80e-15!94;UBERON:0001950!6.96e-14!20;UBERON:0000055!2.43e-13!69;UBERON:0000956!5.11e-13!25;UBERON:0000203!5.11e-13!25;UBERON:0003915!6.62e-13!9;UBERON:0004700!6.62e-13!9;UBERON:0001917!6.62e-13!9;UBERON:0003056!1.49e-12!61;UBERON:0000468!4.03e-11!659;UBERON:0000153!8.32e-11!129;UBERON:0007811!8.32e-11!129;UBERON:0004872!9.46e-11!84;UBERON:0000467!1.98e-10!625;UBERON:0000480!2.41e-10!626;UBERON:0002049!2.95e-10!79;UBERON:0007798!2.95e-10!79;UBERON:0001009!1.29e-09!113;UBERON:0000033!1.39e-09!123;UBERON:0001981!2.81e-09!60;UBERON:0007500!2.81e-09!60;UBERON:0004537!2.81e-09!60;UBERON:0006965!2.81e-09!60;UBERON:0002465!4.24e-09!10;UBERON:0003914!1.49e-08!118;UBERON:0004535!3.80e-08!110;UBERON:0002298!6.39e-08!8;UBERON:0000064!7.33e-08!219;UBERON:0002420!8.58e-08!9;UBERON:0007245!8.58e-08!9;UBERON:0010009!8.58e-08!9;UBERON:0010011!8.58e-08!9;UBERON:0000454!8.58e-08!9;UBERON:0002308!8.84e-08!9;UBERON:0000125!8.84e-08!9;UBERON:0004121!9.92e-08!169;UBERON:0001473!1.10e-07!8;UBERON:0004536!1.10e-07!8;UBERON:0006558!1.10e-07!8;UBERON:0000481!1.32e-07!347;UBERON:0000922!1.91e-07!612;UBERON:0001638!2.12e-07!9;UBERON:0003920!2.12e-07!9;UBERON:0004582!2.12e-07!9;UBERON:0000924!3.13e-07!173;UBERON:0006601!3.13e-07!173;UBERON:0001871!3.70e-07!7;UBERON:0003103!6.19e-07!69|ontology_enrichment_uberon_v019=UBERON:0004638;3.80e-31;18!UBERON:0001986;3.80e-31;18!UBERON:0004852;3.80e-31;18!UBERON:0000487;2.53e-24;22!UBERON:0006914;1.18e-20;25!UBERON:0003915;1.64e-16;9!UBERON:0004700;1.64e-16;9!UBERON:0001917;1.64e-16;9!UBERON:0000490;3.41e-13;33!UBERON:0007023;5.66e-10;114!UBERON:0001638;1.44e-09;9!UBERON:0003920;1.44e-09;9!UBERON:0004582;1.44e-09;9!UBERON:0000055;4.45e-09;65!UBERON:0001473;8.92e-08;8!UBERON:0004536;8.92e-08;8!UBERON:0006558;8.92e-08;8!UBERON:0002465;9.25e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-41,114;UBERON:0004638,4.00e-31,18;UBERON:0001986,4.00e-31,18;UBERON:0004852,4.00e-31,18;UBERON:0000487,2.63e-24,22;UBERON:0004111,4.17e-22,240;UBERON:0006914,1.22e-20,25;UBERON:0000025,5.35e-18,192;UBERON:0000055,2.71e-17,68;UBERON:0003915,1.68e-16,9;UBERON:0004700,1.68e-16,9;UBERON:0001917,1.68e-16,9;UBERON:0002049,8.22e-14,78;UBERON:0007798,8.22e-14,78;UBERON:0004872,4.53e-13,83;UBERON:0007500,1.12e-12,59;UBERON:0001981,1.12e-12,59;UBERON:0004537,1.12e-12,59;UBERON:0006965,1.12e-12,59;UBERON:0001009,4.01e-12,112;UBERON:0003914,5.99e-11,117;UBERON:0004535,3.45e-10,109;UBERON:0001638,1.47e-09,9;UBERON:0003920,1.47e-09,9;UBERON:0004582,1.47e-09,9;UBERON:0000483,2.49e-09,306;UBERON:0000119,4.56e-09,309;UBERON:0001049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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24716 | |||
|TSSclassifier=S | |||
|UniProt=Q5U651,Q7L251,Q8IUR2 | |||
|association_with_transcript=125bp_to_ENST00000222145,NM_017805,uc002pki.2_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_RASIP1_5end | |||
|id=chr19:49243830..49243844,- | |||
|ontology_enrichment_celltype=CL:0002139!5.66e-31!24;CL:0000115!1.24e-28!35;CL:0000071!5.50e-24!18;CL:0002546!5.50e-24!18;CL:0002078!2.07e-20!44;CL:0000213!2.61e-13!57;CL:0000215!2.61e-13!57;CL:1000413!6.62e-13!9;CL:0002544!4.57e-09!6;CL:0002543!6.52e-09!6;CL:0005020!1.59e-08!6;CL:0002138!1.59e-08!6;CL:0005022!1.59e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.25e-40;24!CL:0000115;1.32e-33;36!CL:0000071;3.80e-31;18!CL:0002078;3.53e-19;45!CL:1000413;1.64e-16;9!CL:0000213;2.88e-13;58!CL:0000215;2.88e-13;58!CL:0002544;1.88e-11;6!CL:0002543;2.95e-11;6!CL:0002138;9.86e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.35e-40,24;CL:0000115,5.93e-40,36;CL:0000071,4.00e-31,18;CL:0002546,4.00e-31,18;CL:0002078,8.81e-30,45;CL:0000213,9.22e-21,58;CL:0000215,9.22e-21,58;CL:1000413,1.68e-16,9;CL:0002544,1.91e-11,6;CL:0002543,3.04e-11,6;CL:0005020,9.80e-11,6;CL:0002138,9.80e-11,6;CL:0005022,9.80e-11,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.80e-31;18!CL:0005022;9.86e-11;6!UBERON:0004872;2.83e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@RASIP1 | |||
}} |
Revision as of 21:39, 11 September 2013
Short description: | p3@RASIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RASIP1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 125bp_to_ENST00000222145, NM_017805, uc002pki.2_5end |
EntrezGene: | RASIP1 |
HGNC: | 24716 |
UniProt: | Q5U651Q7L251Q8IUR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.35e-40 | 24 |
endothelial cell | 5.93e-40 | 36 |
blood vessel endothelial cell | 4.00e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.00e-31 | 18 |
meso-epithelial cell | 8.81e-30 | 45 |
lining cell | 9.22e-21 | 58 |
barrier cell | 9.22e-21 | 58 |
endothelial cell of artery | 1.68e-16 | 9 |
aortic endothelial cell | 1.91e-11 | 6 |
vein endothelial cell | 3.04e-11 | 6 |
lymphangioblast | 9.80e-11 | 6 |
endothelial cell of lymphatic vessel | 9.80e-11 | 6 |
vascular lymphangioblast | 9.80e-11 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.