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FFCP PHASE1:Mm9::chr11:100943957..100943992,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71743|HGNC=|UniProt=Q9DBL7|association_with_transcript=18bp_to_ENSMUST00000107308,NM_027896,uc007lnd.1_5end|description=CAGE_peak_2_at_Coasy_5end|id=chr11:100943957..100943992,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.87e-13!63;UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002346!1.39e-11!71;UBERON:0003075!1.39e-11!71;UBERON:0007284!1.39e-11!71;UBERON:0002616!1.71e-11!49;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0001017!2.37e-11!73;UBERON:0005743!2.37e-11!73;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000475!9.74e-10!200;UBERON:0003056!1.13e-09!49;UBERON:0007811!2.76e-09!86;UBERON:0000479!8.68e-09!349;UBERON:0003080!8.99e-09!40;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0004111!1.23e-07!122;UBERON:0000153!1.28e-07!94;UBERON:0002020!3.22e-07!34;UBERON:0000025!7.84e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.82e-12,54;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001049,1.77e-11,52;UBERON:0005068,1.77e-11,52;UBERON:0006241,1.77e-11,52;UBERON:0007135,1.77e-11,52;UBERON:0001017,2.37e-11,73;UBERON:0001016,4.54e-11,75;UBERON:0000955,7.51e-11,47;UBERON:0006238,7.51e-11,47;UBERON:0002616,1.32e-10,46;UBERON:0002346,1.56e-10,64;UBERON:0003075,1.56e-10,64;UBERON:0007284,1.56e-10,64;UBERON:0010371,9.16e-10,73;UBERON:0003056,1.13e-09,49;UBERON:0000479,8.68e-09,349;UBERON:0003080,8.99e-09,40;UBERON:0002780,2.10e-08,39;UBERON:0001890,2.10e-08,39;UBERON:0006240,2.10e-08,39;UBERON:0004111,1.23e-07,122;UBERON:0002020,3.22e-07,34;UBERON:0000025,7.84e-07,114|phase1_expression=14.0930985452219,4.18770489167233,4.09499315450582,8.16653370528441,7.51343594919521,6.21153306073992,7.94282978024787,9.16775596435192,2.81577444303333,3.7450324211519,8.04724450659873,5.74359544766422,9.92964233600993,9.79108507092771,7.66152452176024,7.89653542820321,6.99561878128147,13.4071420277251,12.7516423253337,8.06340338416257,11.3958008802433,10.0283860712894,13.0599894569468,11.0394771727451,12.15869189656,6.89078356938024,6.03066794622705,6.67960821326256,11.2113817479261,8.31699428207772,8.64748991555688,20.9560122241678,26.4477858661365,47.5445043046316,11.554064790051,11.6364251750945,9.59595974433135,2.09265815368454,4.6880120671428,3.14114246384279,1.76469446409304,2.73218193983378,0.971020706062307,10.7012295279241,11.0500855029271,10.2786181210542,25.0365230191373,30.5235218932625,21.3095597252438,21.1928589990969,20.1580447140522,24.4379359420452,5.87239121202077,9.42970784614748,9.74672017513146,5.91696702882678,12.0344044774278,6.70373719960675,14.1621522601718,16.398720357433,17.1134478946668,10.165335962074,13.3394219416671,20.2477436388315,23.7327927016074,22.0248835633291,30.2596111623589,39.9587037534417,10.6800300677732,12.0155285115205,8.62332341540666,14.8538511889978,18.7738259808871,15.8013130987291,12.555756703389,19.3035945188104,16.5173821499083,13.9179198512855,17.2039317246993,18.2003077067668,14.4550476891807,15.6274011167028,23.451371916116,14.069065250792,17.8773949898868,12.9636577608414,12.386336229522,11.7431650869939,8.17842887998388,14.5853111006096,17.6817338108023,20.6501730475533,19.039197343817,26.9851595818909,33.7883737072788,37.6342585161762,14.7466641138339,3.74946709671727,5.97507810586598,8.12681021373782,10.140726223921,11.5493829672886,17.8363667794652,7.11066703153331,13.2059535016841,13.6814327356553,13.6491600153991,17.127581957859,8.54495016035667,19.8912466346865,11.1030609130327,11.5696881758614,12.4532368518272,13.2635923686308,15.4041206347773,19.729654838759,8.89901883843746,20.6777080395474,3.5384422077995,9.22071044700232,7.06692859073259,6.30337829075789,16.775258509631,15.2246014446005,11.1006754611131,10.7291963187608,7.6681679683789,4.19931911695385,6.4805815807263,17.5255048103643,16.9275223042892,12.942398267625,12.5153510538439,18.4115129277838,14.3373750746096,14.6017136760982,10.1839363850316,9.82815067819735,15.4160882644542,23.5694878592851,11.7108398666433,15.4034409970427,16.0255295526761,12.3577950625286,12.1104968489364,10.6334387836425,12.4623293664439,16.039608985819,11.4251036254406,10.9681526497335,10.0292140773451,10.7405908889512,8.34141747676794,11.8405736617537,8.23128545631774,8.55847347319521,14.0442637462647,8.74982884190032,11.6507034752193,8.28503090142008,7.73935997937617,7.56260658136262,11.8372367792605,10.231740050865,7.55908853148153,8.60375595576509,8.85302224618743,8.4071046504362,7.24063339619314,8.37254066803386,9.64718833595683,9.79539915749726,10.9775057645525,11.6759584321523,12.4071069652835,11.1136981369627,6.93879444265976,6.87571473325215,9.17139477301506,6.96710015581316,12.1135413642768,10.6892268050372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|EntrezGene=71743
|HGNC=
|UniProt=Q9DBL7
|association_with_transcript=18bp_to_ENSMUST00000107308,NM_027896,uc007lnd.1_5end
|description=CAGE_peak_2_at_Coasy_5end
|id=chr11:100943957..100943992,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.87e-13!63;UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002346!1.39e-11!71;UBERON:0003075!1.39e-11!71;UBERON:0007284!1.39e-11!71;UBERON:0002616!1.71e-11!49;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0001017!2.37e-11!73;UBERON:0005743!2.37e-11!73;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000475!9.74e-10!200;UBERON:0003056!1.13e-09!49;UBERON:0007811!2.76e-09!86;UBERON:0000479!8.68e-09!349;UBERON:0003080!8.99e-09!40;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0004111!1.23e-07!122;UBERON:0000153!1.28e-07!94;UBERON:0002020!3.22e-07!34;UBERON:0000025!7.84e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.82e-12,54;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001049,1.77e-11,52;UBERON:0005068,1.77e-11,52;UBERON:0006241,1.77e-11,52;UBERON:0007135,1.77e-11,52;UBERON:0001017,2.37e-11,73;UBERON:0001016,4.54e-11,75;UBERON:0000955,7.51e-11,47;UBERON:0006238,7.51e-11,47;UBERON:0002616,1.32e-10,46;UBERON:0002346,1.56e-10,64;UBERON:0003075,1.56e-10,64;UBERON:0007284,1.56e-10,64;UBERON:0010371,9.16e-10,73;UBERON:0003056,1.13e-09,49;UBERON:0000479,8.68e-09,349;UBERON:0003080,8.99e-09,40;UBERON:0002780,2.10e-08,39;UBERON:0001890,2.10e-08,39;UBERON:0006240,2.10e-08,39;UBERON:0004111,1.23e-07,122;UBERON:0002020,3.22e-07,34;UBERON:0000025,7.84e-07,114
|phase1_expression=14.0930985452219,4.18770489167233,4.09499315450582,8.16653370528441,7.51343594919521,6.21153306073992,7.94282978024787,9.16775596435192,2.81577444303333,3.7450324211519,8.04724450659873,5.74359544766422,9.92964233600993,9.79108507092771,7.66152452176024,7.89653542820321,6.99561878128147,13.4071420277251,12.7516423253337,8.06340338416257,11.3958008802433,10.0283860712894,13.0599894569468,11.0394771727451,12.15869189656,6.89078356938024,6.03066794622705,6.67960821326256,11.2113817479261,8.31699428207772,8.64748991555688,20.9560122241678,26.4477858661365,47.5445043046316,11.554064790051,11.6364251750945,9.59595974433135,2.09265815368454,4.6880120671428,3.14114246384279,1.76469446409304,2.73218193983378,0.971020706062307,10.7012295279241,11.0500855029271,10.2786181210542,25.0365230191373,30.5235218932625,21.3095597252438,21.1928589990969,20.1580447140522,24.4379359420452,5.87239121202077,9.42970784614748,9.74672017513146,5.91696702882678,12.0344044774278,6.70373719960675,14.1621522601718,16.398720357433,17.1134478946668,10.165335962074,13.3394219416671,20.2477436388315,23.7327927016074,22.0248835633291,30.2596111623589,39.9587037534417,10.6800300677732,12.0155285115205,8.62332341540666,14.8538511889978,18.7738259808871,15.8013130987291,12.555756703389,19.3035945188104,16.5173821499083,13.9179198512855,17.2039317246993,18.2003077067668,14.4550476891807,15.6274011167028,23.451371916116,14.069065250792,17.8773949898868,12.9636577608414,12.386336229522,11.7431650869939,8.17842887998388,14.5853111006096,17.6817338108023,20.6501730475533,19.039197343817,26.9851595818909,33.7883737072788,37.6342585161762,14.7466641138339,3.74946709671727,5.97507810586598,8.12681021373782,10.140726223921,11.5493829672886,17.8363667794652,7.11066703153331,13.2059535016841,13.6814327356553,13.6491600153991,17.127581957859,8.54495016035667,19.8912466346865,11.1030609130327,11.5696881758614,12.4532368518272,13.2635923686308,15.4041206347773,19.729654838759,8.89901883843746,20.6777080395474,3.5384422077995,9.22071044700232,7.06692859073259,6.30337829075789,16.775258509631,15.2246014446005,11.1006754611131,10.7291963187608,7.6681679683789,4.19931911695385,6.4805815807263,17.5255048103643,16.9275223042892,12.942398267625,12.5153510538439,18.4115129277838,14.3373750746096,14.6017136760982,10.1839363850316,9.82815067819735,15.4160882644542,23.5694878592851,11.7108398666433,15.4034409970427,16.0255295526761,12.3577950625286,12.1104968489364,10.6334387836425,12.4623293664439,16.039608985819,11.4251036254406,10.9681526497335,10.0292140773451,10.7405908889512,8.34141747676794,11.8405736617537,8.23128545631774,8.55847347319521,14.0442637462647,8.74982884190032,11.6507034752193,8.28503090142008,7.73935997937617,7.56260658136262,11.8372367792605,10.231740050865,7.55908853148153,8.60375595576509,8.85302224618743,8.4071046504362,7.24063339619314,8.37254066803386,9.64718833595683,9.79539915749726,10.9775057645525,11.6759584321523,12.4071069652835,11.1136981369627,6.93879444265976,6.87571473325215,9.17139477301506,6.96710015581316,12.1135413642768,10.6892268050372,10.8965241483986,12.7451169495415,8.0669940462567,10.2113351928887,12.0640900224129,12.7332142106337,9.94316844307513,8.08937467788799,10.8069024937347,12.3467589417708,16.1217715810119,10.1681176222659,9.01661885384643,9.36796108088446,12.2190066915604,15.2194729161991,11.8252324422361,18.1560482014911,18.3688511574409,18.2627802604265,28.4594522003663,8.3422552858047,12.579775687245,11.4679677316275,10.9544465549792,9.64708639009667,12.4766667372896,12.3709339103849,12.9708181420028,11.8061407670875,12.9391385874619,17.4906245404197,23.7148631567066,29.8043075977592,24.577445652502,24.6046195895317,12.7479701214957,10.8010104709176,12.87423313892,9.33597971763535,7.74477819352057,12.730475565578,12.3782693260727,8.58588050574315,8.35466263762812,7.30833475840957,11.4807433433391,11.9620219742489,10.1884139300878,8.24499633914616,7.53956419696361,11.4220193601929,20.6540994667995,10.2096596132751,19.7477225684984,14.7686725106176,5.73772308818364,9.08895337935743,7.57219726599016,4.68526493155966,8.83235930704476,9.79772071605463,12.0311284004493,11.6061377623421,6.07216052512342,7.59865230569411,7.90575555893047,14.7807805554031,10.2196861349953,12.4645922567079,11.8907480328111,11.0529982391599,27.8764790513922,10.6823479908192,11.1859716076958,12.0707251043775,13.2885851796348,11.3751004739253,13.6966995379157,9.45187696641514,13.9033977570041,16.1178746547266,17.9211634577498,16.5016869197099,18.3837387107046,12.2441543941291,15.6524007377133,13.9319072770535,15.0739198595933,10.7021290561242,13.657568709976,23.1393361327095,7.50949465803873,10.1679394014634,20.7296694171664,11.0473789470792,10.8181165886257,9.77069383836125,9.43041517624778,15.1009627765456,7.57850175237612,14.6485988588303,9.91051108627546,9.28740905834501,7.59297562215818,8.09984365120171,8.61173634642459,10.2950177942935,6.11922347977879,5.17820373597535,5.66619892598138,19.0934123603023,11.3880957689209,10.5726122905961,10.6925287413583,9.40897332065109,11.1364907510551,7.8221320903196,12.3980183588004,11.7790173892813,15.1649518751398,22.9895545842163,20.856638731315,8.97099276263873,8.76929999422617,8.94475466382619,7.8787492321416,7.26511339610346,9.85800804624333,8.07267186032491,8.80818493175971,8.21386010808421,10.3690802252832,16.4325782726653,10.3389859797984,10.3738066736476,12.2125573599127,10.9206284357164,13.1129694155635,12.7407176491167,11.6674726467916,11.7121081939851,14.02205242452,13.6115349934735,14.1313927072641,11.3529973135589,11.5708133159753,12.0167103316062,8.65745218158852,5.11368982674011,3.8613461763738,12.3641340180602,10.1348536743638,7.14291334642334,9.21784030039983,16.551879433167,19.7663144915973,17.4923589872727,14.8952833494243,18.0445841460872,13.7016503954128,15.8632718451837,14.8504950050997,14.4102785031751,13.5942722695261,17.0860902878101,9.13328658740755,14.3648954424371,13.1464876430683,9.72426868273176,9.22297915563122,13.052889099951,13.5570503958985,10.9198580336614,10.5903339165299,12.3821633764261,11.4065684950608,12.8265912142532,8.98958471710871,9.53974770832552,9.9363361293211,13.8125170472091,11.4725482685407,10.2241886845764,7.41754621445952,14.5726930933053,10.6289468239479,11.1809757880383,11.6833733074187,12.3544454137479,12.516547595239,12.3537327521848,10.9756783723664,13.1534855718921,14.1236278399696,17.9565526930476,12.3380418849141,10.5399796141853,15.1415485972785,12.5498841360632,14.0821826016233,14.7388240983388,14.9716229405061,16.7599422157673,17.7898148824024,13.8972594045295,11.1296561097802
|short_description=p2@Coasy
}}

Revision as of 18:14, 12 September 2013

Short description:p2@Coasy
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Coasy_5end
Coexpression cluster:NA
Association with transcript: 18bp_to_ENSMUST00000107308, NM_027896, uc007lnd.1_5end
EntrezGene:Coasy
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Coasy

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.06
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G626.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.31
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C314.16
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E723.73
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.02
Mouse Microglia, donor1.CNhs12629.11718-123C830.26
Mouse Microglia, donor2.CNhs12634.11736-123E839.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D98.18
Mouse Schwann, donor2.CNhs12573.11746-123F914.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F637.63
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.13
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D719.89
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F513.26
adrenal gland, neonate N00.CNhs11191.1311-23C115.40
adrenal gland, neonate N25.CNhs11223.1377-27I319.73
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B214.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B215.42
eyeball, adult.CNhs10484.31-12G423.57
eyeball, embryo E12.CNhs11016.345-16C611.71
eyeball, embryo E14.CNhs10521.399-16E215.40
eyeball, embryo E15.CNhs10593.426-16C916.03
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C612.11
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G812.46
eyeball, neonate N16.CNhs11188.777-19A216.04
forelimb, embryo E11.CNhs10596.335-25E211.43
forelimb, embryo E12.CNhs10600.359-14H210.97
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.04
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D411.84
heart, embryo E15.CNhs11017.431-16C810.23
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I27.24
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G19.65
heart, neonate N20.CNhs11127.821-26I69.80
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E910.21
intestine, neonate N06.CNhs11102.688-20B812.06
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F810.17
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G715.22
kidney, neonate N10.CNhs11206.758-6D511.83
kidney, neonate N20.CNhs11113.832-19I118.16
kidney, neonate N25.CNhs11122.1353-25F318.37
kidney, neonate N30.CNhs11203.1385-42H118.26
liver, adult pregnant day01.CNhs10466.508-5B228.46
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H612.58
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D710.95
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F412.97
liver, neonate N03.CNhs11123.1345-25G211.81
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H217.49
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A329.80
liver, neonate N25.CNhs11198.1368-26H124.58
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B112.75
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A612.73
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H28.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C219.75
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I710.22
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I411.89
oviduct, adult pregnant day01.CNhs10500.988-6G611.05
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F410.68
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B616.12
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G818.38
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C715.65
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B915.07
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F820.73
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C415.10
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G29.91
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E311.39
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D410.69
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B87.82
stomach, neonate N07.CNhs11210.718-18A912.40
stomach, neonate N25.CNhs11104.1355-25E411.78
stomach, neonate N30.CNhs11134.1386-42I115.16
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F58.97
testis, embryo E15.CNhs11034.443-27C58.77
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.88
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I48.07
testis, neonate N10.CNhs11204.763-44D98.81
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B516.43
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I210.37
thymus, embryo E16.CNhs11002.456-26C512.21
thymus, embryo E17.CNhs10581.478-18C110.92
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F812.74
thymus, neonate N03.CNhs11137.2104-43C711.67
thymus, neonate N06.CNhs11197.681-26C411.71
thymus, neonate N07.CNhs11211.713-19D314.02
thymus, neonate N10.CNhs11194.748-24E413.61
thymus, neonate N20.CNhs11186.820-7A214.13
thymus, neonate N25.CNhs11125.1362-25G711.35
thymus, neonate N30.CNhs11132.1393-42G211.57
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F510.13
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I89.13
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F213.05
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.55
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I514.74
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.82e-1254
ectoderm-derived structure1.75e-1195
ectoderm1.75e-1195
presumptive ectoderm1.75e-1195
neural tube1.77e-1152
neural rod1.77e-1152
future spinal cord1.77e-1152
neural keel1.77e-1152
central nervous system2.37e-1173
nervous system4.54e-1175
brain7.51e-1147
future brain7.51e-1147
regional part of brain1.32e-1046
neurectoderm1.56e-1064
neural plate1.56e-1064
presumptive neural plate1.56e-1064
ecto-epithelium9.16e-1073
pre-chordal neural plate1.13e-0949
tissue8.68e-09349
anterior neural tube8.99e-0940
regional part of forebrain2.10e-0839
forebrain2.10e-0839
future forebrain2.10e-0839
anatomical conduit1.23e-07122
gray matter3.22e-0734
tube7.84e-07114







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