FFCP PHASE1:Mm9::chr14:54795649..54795657,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=279|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54795649..54795657,+|id=chr14:54795649..54795657,+|ontology_enrichment_celltype=CL:0000791!1.78e-35!9;CL:0000789!1.78e-35!9;CL:0002420!1.78e-35!9;CL:0002419!1.78e-35!9;CL:0000790!1.78e-35!9;CL:0000624!9.01e-32!8;CL:0000084!8.75e-29!11;CL:0000827!8.75e-29!11;CL:0000838!2.84e-26!12;CL:0000542!3.79e-24!13;CL:0000051!3.79e-24!13;CL:0000893!3.90e-24!6;CL:0002489!3.90e-24!6;CL:0000898!3.90e-24!6;CL:0000809!3.90e-24!6;CL:0000810!3.90e-24!6;CL:0000895!3.90e-24!6;CL:0000808!3.90e-24!6;CL:0000894!3.90e-24!6;CL:0000806!3.90e-24!6;CL:0000807!3.90e-24!6;CL:0000805!3.90e-24!6;CL:0002425!3.90e-24!6;CL:0002436!3.90e-24!6;CL:0002427!3.90e-24!6;CL:0002428!3.90e-24!6;CL:0002429!3.90e-24!6;CL:0002433!3.90e-24!6;CL:0002431!3.90e-24!6;CL:0002432!3.90e-24!6;CL:0000738!3.85e-18!17;CL:0002087!3.85e-18!17;CL:0002031!6.96e-12!25;CL:0000988!5.68e-09!32;CL:0002032!5.68e-09!32;CL:0000037!5.68e-09!32;CL:0000566!5.68e-09!32;CL:0000837!5.68e-09!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.38e-35,8;CL:0000791,1.59e-31,9;CL:0000789,1.59e-31,9;CL:0002420,1.59e-31,9;CL:0002419,1.59e-31,9;CL:0000790,1.59e-31,9;CL:0000893,4.62e-27,6;CL:0002489,4.62e-27,6;CL:0000898,4.62e-27,6;CL:0000809,4.62e-27,6;CL:0000810,4.62e-27,6;CL:0000895,4.62e-27,6;CL:0000808,4.62e-27,6;CL:0000894,4.62e-27,6;CL:0000806,4.62e-27,6;CL:0000807,4.62e-27,6;CL:0000805,4.62e-27,6;CL:0002425,4.62e-27,6;CL:0002436,4.62e-27,6;CL:0002427,4.62e-27,6;CL:0002428,4.62e-27,6;CL:0002429,4.62e-27,6;CL:0002433,4.62e-27,6;CL:0002431,4.62e-27,6;CL:0002432,4.62e-27,6;CL:0000084,5.88e-26,11;CL:0000827,5.88e-26,11;CL:0000838,7.25e-24,12;CL:0000542,4.28e-22,13;CL:0000051,4.28e-22,13;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0000738,4.37e-17,17;CL:0002087,4.37e-17,17;CL:0002031,7.49e-12,25;CL:0000988,2.11e-09,32;CL:0002032,2.11e-09,32;CL:0000037,2.11e-09,32;CL:0000837,2.11e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.75e-46!23;UBERON:0000974!1.75e-46!23;UBERON:0004807!1.75e-46!23;UBERON:0005058!1.75e-46!23;UBERON:0003351!1.75e-46!23;UBERON:0009113!1.75e-46!23;UBERON:0003295!1.75e-46!23;UBERON:0009722!1.75e-46!23;UBERON:0005562!1.75e-46!23;UBERON:0007690!1.75e-46!23;UBERON:0006562!1.99e-44!24;UBERON:0003408!1.99e-44!24;UBERON:0001557!1.99e-44!24;UBERON:0001042!1.99e-44!24;UBERON:0008814!1.99e-44!24;UBERON:0009145!1.99e-44!24;UBERON:0000072!3.58e-39!27;UBERON:0004177!2.85e-36!29;UBERON:0000063!1.49e-29!35;UBERON:0000065!8.48e-25!41;UBERON:0001004!3.89e-24!42;UBERON:0002193!2.23e-23!48;UBERON:0002390!2.50e-22!45;UBERON:0003061!2.50e-22!45;UBERON:0005057!2.38e-19!51;UBERON:0003929!1.01e-17!55;UBERON:0002368!5.40e-16!60;UBERON:0002405!4.84e-15!70;UBERON:0000949!1.45e-14!72;UBERON:0002530!1.58e-14!65;UBERON:0000490!2.91e-14!66;UBERON:0005911!1.65e-13!69;UBERON:0003081!2.62e-11!88;UBERON:0000064!5.44e-11!99;UBERON:0001041!1.07e-10!92;UBERON:0000153!2.22e-10!94;UBERON:0007811!3.14e-10!86;UBERON:0000077!5.60e-10!97;UBERON:0004921!6.37e-08!126;UBERON:0004185!6.37e-08!126;UBERON:0001007!9.58e-08!128;UBERON:0001555!9.58e-08!128;UBERON:0007026!9.58e-08!128;UBERON:0004119!1.42e-07!130;UBERON:0000925!1.42e-07!130;UBERON:0006595!1.42e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.563154888606667,3.27690336850791,2.05461561870606,6.06268408364557,0.342401459862411,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.79472541912506,0.360586348559907,0.738447635872886,0.504832249740738,0.609654453239999,0.504130925684203,0.0974578807397524,0.481059208201647,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54795649..54795657,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=279 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:54795649..54795657,+ | |||
|id=chr14:54795649..54795657,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.78e-35!9;CL:0000789!1.78e-35!9;CL:0002420!1.78e-35!9;CL:0002419!1.78e-35!9;CL:0000790!1.78e-35!9;CL:0000624!9.01e-32!8;CL:0000084!8.75e-29!11;CL:0000827!8.75e-29!11;CL:0000838!2.84e-26!12;CL:0000542!3.79e-24!13;CL:0000051!3.79e-24!13;CL:0000893!3.90e-24!6;CL:0002489!3.90e-24!6;CL:0000898!3.90e-24!6;CL:0000809!3.90e-24!6;CL:0000810!3.90e-24!6;CL:0000895!3.90e-24!6;CL:0000808!3.90e-24!6;CL:0000894!3.90e-24!6;CL:0000806!3.90e-24!6;CL:0000807!3.90e-24!6;CL:0000805!3.90e-24!6;CL:0002425!3.90e-24!6;CL:0002436!3.90e-24!6;CL:0002427!3.90e-24!6;CL:0002428!3.90e-24!6;CL:0002429!3.90e-24!6;CL:0002433!3.90e-24!6;CL:0002431!3.90e-24!6;CL:0002432!3.90e-24!6;CL:0000738!3.85e-18!17;CL:0002087!3.85e-18!17;CL:0002031!6.96e-12!25;CL:0000988!5.68e-09!32;CL:0002032!5.68e-09!32;CL:0000037!5.68e-09!32;CL:0000566!5.68e-09!32;CL:0000837!5.68e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.38e-35,8;CL:0000791,1.59e-31,9;CL:0000789,1.59e-31,9;CL:0002420,1.59e-31,9;CL:0002419,1.59e-31,9;CL:0000790,1.59e-31,9;CL:0000893,4.62e-27,6;CL:0002489,4.62e-27,6;CL:0000898,4.62e-27,6;CL:0000809,4.62e-27,6;CL:0000810,4.62e-27,6;CL:0000895,4.62e-27,6;CL:0000808,4.62e-27,6;CL:0000894,4.62e-27,6;CL:0000806,4.62e-27,6;CL:0000807,4.62e-27,6;CL:0000805,4.62e-27,6;CL:0002425,4.62e-27,6;CL:0002436,4.62e-27,6;CL:0002427,4.62e-27,6;CL:0002428,4.62e-27,6;CL:0002429,4.62e-27,6;CL:0002433,4.62e-27,6;CL:0002431,4.62e-27,6;CL:0002432,4.62e-27,6;CL:0000084,5.88e-26,11;CL:0000827,5.88e-26,11;CL:0000838,7.25e-24,12;CL:0000542,4.28e-22,13;CL:0000051,4.28e-22,13;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0000738,4.37e-17,17;CL:0002087,4.37e-17,17;CL:0002031,7.49e-12,25;CL:0000988,2.11e-09,32;CL:0002032,2.11e-09,32;CL:0000037,2.11e-09,32;CL:0000837,2.11e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.75e-46!23;UBERON:0000974!1.75e-46!23;UBERON:0004807!1.75e-46!23;UBERON:0005058!1.75e-46!23;UBERON:0003351!1.75e-46!23;UBERON:0009113!1.75e-46!23;UBERON:0003295!1.75e-46!23;UBERON:0009722!1.75e-46!23;UBERON:0005562!1.75e-46!23;UBERON:0007690!1.75e-46!23;UBERON:0006562!1.99e-44!24;UBERON:0003408!1.99e-44!24;UBERON:0001557!1.99e-44!24;UBERON:0001042!1.99e-44!24;UBERON:0008814!1.99e-44!24;UBERON:0009145!1.99e-44!24;UBERON:0000072!3.58e-39!27;UBERON:0004177!2.85e-36!29;UBERON:0000063!1.49e-29!35;UBERON:0000065!8.48e-25!41;UBERON:0001004!3.89e-24!42;UBERON:0002193!2.23e-23!48;UBERON:0002390!2.50e-22!45;UBERON:0003061!2.50e-22!45;UBERON:0005057!2.38e-19!51;UBERON:0003929!1.01e-17!55;UBERON:0002368!5.40e-16!60;UBERON:0002405!4.84e-15!70;UBERON:0000949!1.45e-14!72;UBERON:0002530!1.58e-14!65;UBERON:0000490!2.91e-14!66;UBERON:0005911!1.65e-13!69;UBERON:0003081!2.62e-11!88;UBERON:0000064!5.44e-11!99;UBERON:0001041!1.07e-10!92;UBERON:0000153!2.22e-10!94;UBERON:0007811!3.14e-10!86;UBERON:0000077!5.60e-10!97;UBERON:0004921!6.37e-08!126;UBERON:0004185!6.37e-08!126;UBERON:0001007!9.58e-08!128;UBERON:0001555!9.58e-08!128;UBERON:0007026!9.58e-08!128;UBERON:0004119!1.42e-07!130;UBERON:0000925!1.42e-07!130;UBERON:0006595!1.42e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.563154888606667,3.27690336850791,2.05461561870606,6.06268408364557,0.342401459862411,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.79472541912506,0.360586348559907,0.738447635872886,0.504832249740738,0.609654453239999,0.504130925684203,0.0974578807397524,0.481059208201647,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54795649..54795657,+ | |||
}} |
Revision as of 02:22, 13 September 2013
Short description: | p@chr14:54795649..54795657, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54795649..54795657, + |
Coexpression cluster: | MCL_coexpression_mm9:279 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.