FFCP PHASE1:Mm9::chr17:45692676..45692695,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18037|HGNC=|MCL_coexpression_id=710|UniProt=O54910|association_with_transcript=11bp_to_ENSMUST00000024742,NM_008690,uc008cqv.1_5end|description=CAGE_peak_2_at_Nfkbie_5end|id=chr17:45692676..45692695,+|ontology_enrichment_celltype=CL:0000063!4.10e-12!66;CL:0000988!1.84e-09!32;CL:0002032!1.84e-09!32;CL:0000037!1.84e-09!32;CL:0000566!1.84e-09!32;CL:0000837!1.84e-09!32;CL:0002320!4.17e-09!46;CL:0000134!4.17e-09!46;CL:0000219!6.14e-08!54;CL:0002031!2.91e-07!25;CL:0000738!6.10e-07!17;CL:0002087!6.10e-07!17;CL:0000838!7.51e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,4.36e-12,32;CL:0002032,4.36e-12,32;CL:0000037,4.36e-12,32;CL:0000837,4.36e-12,32;CL:0002320,3.01e-11,46;CL:0000134,3.01e-11,46;CL:0002031,1.92e-09,25;CL:0000219,7.04e-09,54;CL:0000738,7.65e-08,17;CL:0002087,7.65e-08,17;CL:0000838,1.14e-07,12;CL:0000084,6.63e-07,11;CL:0000827,6.63e-07,11;CL:0000049,9.57e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.38e-21!48;UBERON:0002390!6.13e-20!45;UBERON:0003061!6.13e-20!45;UBERON:0002405!1.84e-16!70;UBERON:0003081!4.35e-14!88;UBERON:0004177!2.29e-12!29;UBERON:0002204!6.80e-11!32;UBERON:0000072!1.60e-10!27;UBERON:0003408!2.62e-10!24;UBERON:0000063!3.47e-10!35;UBERON:0002370!4.83e-10!23;UBERON:0000974!4.83e-10!23;UBERON:0004807!4.83e-10!23;UBERON:0005058!4.83e-10!23;UBERON:0003351!4.83e-10!23;UBERON:0009113!4.83e-10!23;UBERON:0003295!4.83e-10!23;UBERON:0009722!4.83e-10!23;UBERON:0005562!4.83e-10!23;UBERON:0007690!4.83e-10!23;UBERON:0000490!7.81e-10!66;UBERON:0006562!1.75e-09!24;UBERON:0001557!1.75e-09!24;UBERON:0001042!1.75e-09!24;UBERON:0008814!1.75e-09!24;UBERON:0009145!1.75e-09!24;UBERON:0002384!4.17e-09!46;UBERON:0001474!1.87e-08!22;UBERON:0004765!1.87e-08!22;UBERON:0001434!1.87e-08!22;UBERON:0002371!2.50e-08!16;UBERON:0005057!2.83e-08!51;UBERON:0003929!1.37e-07!55;UBERON:0001004!9.10e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-25,48;UBERON:0002405,2.99e-25,48;UBERON:0002390,2.44e-23,45;UBERON:0003061,2.44e-23,45;UBERON:0000077,9.92e-15,35;UBERON:0003081,1.09e-14,87;UBERON:0004177,1.46e-14,29;UBERON:0005057,1.46e-14,29;UBERON:0002204,3.34e-12,32;UBERON:0003408,3.52e-12,24;UBERON:0000072,3.96e-12,27;UBERON:0002370,7.08e-12,23;UBERON:0000974,7.08e-12,23;UBERON:0004807,7.08e-12,23;UBERON:0005058,7.08e-12,23;UBERON:0003351,7.08e-12,23;UBERON:0009113,7.08e-12,23;UBERON:0003295,7.08e-12,23;UBERON:0009722,7.08e-12,23;UBERON:0005562,7.08e-12,23;UBERON:0007690,7.08e-12,23;UBERON:0002384,3.01e-11,46;UBERON:0006562,6.27e-11,24;UBERON:0001557,6.27e-11,24;UBERON:0001042,6.27e-11,24;UBERON:0008814,6.27e-11,24;UBERON:0009145,6.27e-11,24;UBERON:0000490,2.23e-10,66;UBERON:0000926,6.62e-10,120;UBERON:0004120,6.62e-10,120;UBERON:0006603,6.62e-10,120;UBERON:0001474,2.18e-09,22;UBERON:0004765,2.18e-09,22;UBERON:0001434,2.18e-09,22;UBERON:0002371,2.26e-09,16;UBERON:0003929,6.31e-08,55;UBERON:0001004,7.91e-08,42;UBERON:0000065,1.57e-07,41|phase1_expression=1.28119077683835,14.3079917132138,15.0149748998547,2.41971369045464,1.00179145989269,9.40123922706583,10.5125688267987,9.94249590500137,110.800724333362,72.560003159818,8.90333434772626,8.53562101250099,8.73123722649149,5.15780374272085,6.32908547449759,8.90891176515234,3.49780939064073,41.9564679926456,42.3683599841733,42.014575528005,1.44573593256819,4.26951090163807,2.35079810225042,9.27956052201759,8.71755268055246,9.76194338995534,14.6459078694085,10.9890328669803,0.760093677825496,0.504060259519861,5.98672378769323,0,0,0,0.866554859253824,0.831173226792462,0.816677425049476,5.02237956884289,7.813353445238,5.23523743973798,14.1175557127443,10.2456822743767,7.76816564849846,4.53228544712078,5.5757312170733,4.03802854755699,0.782391344348039,0.872100625521786,1.09843091367236,0.777719596297134,0.55994568650145,1.43752564364972,56.3749556353994,23.9369506863744,22.8543783416875,3.34437266846731,4.58453503902011,4.64104883049698,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,3.55717918444456,17.5480444869873,16.8107281636386,22.0248835633291,8.38880309451533,3.45796474789399,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.191690942036473,0,0,1.40456071893706,0,0.263772575460388,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.30559649555362,0.589257170947335,0.569486723196412,0.372798891650601,2.80186915332781,0.529000920747499,25.7979394944493,5.16254326188832,0,0,0.649776417447669,0.896053774194671,2.10666630197628,0.681721290312231,1.03914401841148,2.47337702157238,0.563373679106722,2.56652954828636,0,7.11066703153331,6.061749148314,6.84071636782766,5.56076889516262,2.96878087269556,40.9121856162531,2.22663208597237,0.693941307064543,0.608930956624282,0.461230994512117,0.150722640552623,0.587943535678524,1.25666591329675,0.988779870937496,1.44599356919912,7.96149496754887,2.42650274921114,5.52103796150984,2.90925151881133,1.86391761218122,4.09893115816166,4.6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| ||
|EntrezGene=18037 | |||
|HGNC= | |||
|MCL_coexpression_id=710 | |||
|UniProt=O54910 | |||
|association_with_transcript=11bp_to_ENSMUST00000024742,NM_008690,uc008cqv.1_5end | |||
|description=CAGE_peak_2_at_Nfkbie_5end | |||
|id=chr17:45692676..45692695,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.10e-12!66;CL:0000988!1.84e-09!32;CL:0002032!1.84e-09!32;CL:0000037!1.84e-09!32;CL:0000566!1.84e-09!32;CL:0000837!1.84e-09!32;CL:0002320!4.17e-09!46;CL:0000134!4.17e-09!46;CL:0000219!6.14e-08!54;CL:0002031!2.91e-07!25;CL:0000738!6.10e-07!17;CL:0002087!6.10e-07!17;CL:0000838!7.51e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.36e-12,32;CL:0002032,4.36e-12,32;CL:0000037,4.36e-12,32;CL:0000837,4.36e-12,32;CL:0002320,3.01e-11,46;CL:0000134,3.01e-11,46;CL:0002031,1.92e-09,25;CL:0000219,7.04e-09,54;CL:0000738,7.65e-08,17;CL:0002087,7.65e-08,17;CL:0000838,1.14e-07,12;CL:0000084,6.63e-07,11;CL:0000827,6.63e-07,11;CL:0000049,9.57e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-21!48;UBERON:0002390!6.13e-20!45;UBERON:0003061!6.13e-20!45;UBERON:0002405!1.84e-16!70;UBERON:0003081!4.35e-14!88;UBERON:0004177!2.29e-12!29;UBERON:0002204!6.80e-11!32;UBERON:0000072!1.60e-10!27;UBERON:0003408!2.62e-10!24;UBERON:0000063!3.47e-10!35;UBERON:0002370!4.83e-10!23;UBERON:0000974!4.83e-10!23;UBERON:0004807!4.83e-10!23;UBERON:0005058!4.83e-10!23;UBERON:0003351!4.83e-10!23;UBERON:0009113!4.83e-10!23;UBERON:0003295!4.83e-10!23;UBERON:0009722!4.83e-10!23;UBERON:0005562!4.83e-10!23;UBERON:0007690!4.83e-10!23;UBERON:0000490!7.81e-10!66;UBERON:0006562!1.75e-09!24;UBERON:0001557!1.75e-09!24;UBERON:0001042!1.75e-09!24;UBERON:0008814!1.75e-09!24;UBERON:0009145!1.75e-09!24;UBERON:0002384!4.17e-09!46;UBERON:0001474!1.87e-08!22;UBERON:0004765!1.87e-08!22;UBERON:0001434!1.87e-08!22;UBERON:0002371!2.50e-08!16;UBERON:0005057!2.83e-08!51;UBERON:0003929!1.37e-07!55;UBERON:0001004!9.10e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-25,48;UBERON:0002405,2.99e-25,48;UBERON:0002390,2.44e-23,45;UBERON:0003061,2.44e-23,45;UBERON:0000077,9.92e-15,35;UBERON:0003081,1.09e-14,87;UBERON:0004177,1.46e-14,29;UBERON:0005057,1.46e-14,29;UBERON:0002204,3.34e-12,32;UBERON:0003408,3.52e-12,24;UBERON:0000072,3.96e-12,27;UBERON:0002370,7.08e-12,23;UBERON:0000974,7.08e-12,23;UBERON:0004807,7.08e-12,23;UBERON:0005058,7.08e-12,23;UBERON:0003351,7.08e-12,23;UBERON:0009113,7.08e-12,23;UBERON:0003295,7.08e-12,23;UBERON:0009722,7.08e-12,23;UBERON:0005562,7.08e-12,23;UBERON:0007690,7.08e-12,23;UBERON:0002384,3.01e-11,46;UBERON:0006562,6.27e-11,24;UBERON:0001557,6.27e-11,24;UBERON:0001042,6.27e-11,24;UBERON:0008814,6.27e-11,24;UBERON:0009145,6.27e-11,24;UBERON:0000490,2.23e-10,66;UBERON:0000926,6.62e-10,120;UBERON:0004120,6.62e-10,120;UBERON:0006603,6.62e-10,120;UBERON:0001474,2.18e-09,22;UBERON:0004765,2.18e-09,22;UBERON:0001434,2.18e-09,22;UBERON:0002371,2.26e-09,16;UBERON:0003929,6.31e-08,55;UBERON:0001004,7.91e-08,42;UBERON:0000065,1.57e-07,41 | |||
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| |||
|short_description=p2@Nfkbie | |||
}} |
Revision as of 14:37, 13 September 2013
Short description: | p2@Nfkbie |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nfkbie_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | 11bp_to_ENSMUST00000024742, NM_008690, uc008cqv.1_5end |
EntrezGene: | Nfkbie |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.36e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.36e-12 | 32 |
hematopoietic stem cell | 4.36e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.36e-12 | 32 |
connective tissue cell | 3.01e-11 | 46 |
mesenchymal cell | 3.01e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 1.92e-09 | 25 |
motile cell | 7.04e-09 | 54 |
leukocyte | 7.65e-08 | 17 |
nongranular leukocyte | 7.65e-08 | 17 |
lymphoid lineage restricted progenitor cell | 1.14e-07 | 12 |
T cell | 6.63e-07 | 11 |
pro-T cell | 6.63e-07 | 11 |
common myeloid progenitor | 9.57e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.