FFCP PHASE1:Mm9::chr17:46434866..46434887,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106565|HGNC=|MCL_coexpression_id=47|UniProt=E9QLR2,Q8K1E3|association_with_transcript=0bp_to_ENSMUST00000113490,ENSMUST00000166617,uc008csm.2_5end|description=CAGE_peak_2_at_Dlk2_5end|id=chr17:46434866..46434887,+|ontology_enrichment_celltype=CL:0000221!7.94e-09!44;CL:0000133!7.94e-09!44;CL:0000055!2.01e-08!50;CL:0002319!2.99e-08!43;CL:0000117!2.22e-07!23;CL:0000337!2.22e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.93e-09,44;CL:0000133,1.93e-09,44;CL:0002319,1.00e-08,43;CL:0002453,1.88e-08,8;CL:0000117,7.73e-08,23;CL:0000337,7.73e-08,23;CL:0000128,3.25e-07,6;CL:0000126,3.25e-07,6;CL:0000127,3.25e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.49e-16!102;UBERON:0000924!1.49e-16!102;UBERON:0006601!1.49e-16!102;UBERON:0000033!1.73e-14!63;UBERON:0000153!4.41e-14!94;UBERON:0002020!8.18e-13!34;UBERON:0007811!1.46e-12!86;UBERON:0000073!4.73e-12!75;UBERON:0001016!4.73e-12!75;UBERON:0001017!5.37e-12!73;UBERON:0005743!5.37e-12!73;UBERON:0003056!2.07e-10!49;UBERON:0001049!4.41e-10!52;UBERON:0005068!4.41e-10!52;UBERON:0006241!4.41e-10!52;UBERON:0007135!4.41e-10!52;UBERON:0002791!5.34e-10!29;UBERON:0003528!5.34e-10!29;UBERON:0001893!5.34e-10!29;UBERON:0002616!9.32e-10!49;UBERON:0000955!1.06e-09!50;UBERON:0006238!1.06e-09!50;UBERON:0002346!1.22e-09!71;UBERON:0003075!1.22e-09!71;UBERON:0007284!1.22e-09!71;UBERON:0003080!4.85e-08!40;UBERON:0002780!6.87e-08!39;UBERON:0001890!6.87e-08!39;UBERON:0006240!6.87e-08!39;UBERON:0002619!2.16e-07!17;UBERON:0000956!6.65e-07!21;UBERON:0001869!6.65e-07!21;UBERON:0000203!6.65e-07!21;UBERON:0002021!8.40e-07!10;UBERON:0000411!8.40e-07!10;UBERON:0001950!8.40e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0002020,6.38e-15,34;UBERON:0010371,3.59e-14,73;UBERON:0001017,1.21e-12,73;UBERON:0000073,1.67e-12,54;UBERON:0001016,6.55e-12,75;UBERON:0003528,3.06e-11,29;UBERON:0002791,3.06e-11,29;UBERON:0001893,3.06e-11,29;UBERON:0002346,6.54e-11,64;UBERON:0003075,6.54e-11,64;UBERON:0007284,6.54e-11,64;UBERON:0001049,4.63e-10,52;UBERON:0005068,4.63e-10,52;UBERON:0006241,4.63e-10,52;UBERON:0007135,4.63e-10,52;UBERON:0003056,1.03e-09,49;UBERON:0002021,1.09e-08,10;UBERON:0000411,1.09e-08,10;UBERON:0001950,1.09e-08,10;UBERON:0002619,1.83e-08,17;UBERON:0003080,8.35e-08,40;UBERON:0000956,9.20e-08,21;UBERON:0001869,9.20e-08,21;UBERON:0000203,9.20e-08,21;UBERON:0002780,1.32e-07,39;UBERON:0001890,1.32e-07,39;UBERON:0006240,1.32e-07,39;UBERON:0002616,1.42e-07,46;UBERON:0000955,3.12e-07,47;UBERON:0006238,3.12e-07,47|phase1_expression=50.2867379909053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.1330713617802,0.709638518536602,3.30384153891027,3.9119567217402,14.171635164729,14.0599156950062,7.38833616482277,6.7193482380174,5.75010257459886,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,1.41621522601718,2.64495489636016,1.90149421051854,6.77689064138264,8.89294796111139,0,0.988866362566974,0,2.09720077362883,3.07374644257244,0.311068836925433,0,1.26194976810829,4.28476476605705,8.1721360152097,0.489963196859816,0.575072826109418,0,5.50579404996943,2.93680877595932,5.52983519722476,1.18697658957174,0.548925861614458,2.08365348222704,3.35019598801657,4.50210088025344,4.5839474333043,2.94628585473668,4.27115042397309,1.86399445825301,0.908714319998209,0.226714680320357,0,0,0,0,0,0,0.280888840263504,1.1930122580464,1.03914401841148,2.12003744706204,26.4785629180159,2.56652954828636,2.54805239706646,0,0.432982082022428,1.01343946190039,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,2.74500361691176,1.7591609295801,1.73824320192276,1.79000820131231,0.83115217823824,1.1356888414743,0.203678727700633,0.373220911830279,1.51633655060205,1.26265113531884,2.34216797332867,2.06911893990126,2.52086981727489,2.10986744970001,1.02054748726992,0.640568601424249,0.843315521037559,1.29351685369508,0,1.51284864134255,1.93546236580344,2.41115305670332,2.78047249225598,2.78601733217733,2.05782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.05144974282064,2.77842453424068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0.509235257325564,0,3.01511263395268,5.47500374037832,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,0.642202359951168,0.937693492737625,1.80328439914343,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0,0,0,0,0.321321316421807,0.141940085208269,0.712262414669021,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,1.08036656418786,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,1.40803024838226,0.42366414172764,1.32317038832977,3.2977250588296,3.39075296061402,1.38719727334758,2.26807453605959,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.18805874903981,2.50905955217362,2.62035076495413,1.75323650300267,0.578574190077352,1.04702376793612,0,2.4853572523477,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0.632022241256357,0.608175645870493,2.05421914329655,1.94881234466693,1.07416017400489,0.39736270956253,0.360586348559907,1.18151621739662,0.807731599585181,0.15241361331,0.705783295957884,0.194915761479505,0.192423683280659,0.233753804363138,4.0811469050738,1.33191572024439,0.62799699626633,0.839423081820392,1.35232715822533,0.375364950902364,0,0.857473516316263,2.00628841614145,2.25900737046827,3.22227665555024,2.29158205375759,4.1244763762485,3.42541259885321,3.7769694869485,2.70009000092722,2.2516060161211,4.53142408984205,2.5888015587591,0.103787347584177,0,1.36586884603307,2.18796045361465,0.838452650511929,1.10306105070008,1.11123363900808,1.85431551515005,1.28367683836726,0.758091635291392,2.02783439912192,1.50901073108861,1.12369808963859,1.47257850531199,1.49332219284595,1.42888107384922,1.62238056322798,0.964546102318525,2.06042950401653,1.47198920134397,1.02860775715625,0.70990322463735,1.66905332963125,0.726732083161643,1.41164070622996,1.60767754994185,0.73171189149109,1.05227884575137,0.950628796921032,0.561142271657738,1.30498519936592,1.18205378850676,0,0.619747364743864,1.15743966588685,2.99772693525535,1.16965804222704,1.28922632428979,1.72159498861959,0.220591419119515,0.231867835620421|short_description=p2@Dlk2}} | ||
|EntrezGene=106565 | |||
|HGNC= | |||
|MCL_coexpression_id=47 | |||
|UniProt=E9QLR2,Q8K1E3 | |||
|association_with_transcript=0bp_to_ENSMUST00000113490,ENSMUST00000166617,uc008csm.2_5end | |||
|description=CAGE_peak_2_at_Dlk2_5end | |||
|id=chr17:46434866..46434887,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.94e-09!44;CL:0000133!7.94e-09!44;CL:0000055!2.01e-08!50;CL:0002319!2.99e-08!43;CL:0000117!2.22e-07!23;CL:0000337!2.22e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.93e-09,44;CL:0000133,1.93e-09,44;CL:0002319,1.00e-08,43;CL:0002453,1.88e-08,8;CL:0000117,7.73e-08,23;CL:0000337,7.73e-08,23;CL:0000128,3.25e-07,6;CL:0000126,3.25e-07,6;CL:0000127,3.25e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.49e-16!102;UBERON:0000924!1.49e-16!102;UBERON:0006601!1.49e-16!102;UBERON:0000033!1.73e-14!63;UBERON:0000153!4.41e-14!94;UBERON:0002020!8.18e-13!34;UBERON:0007811!1.46e-12!86;UBERON:0000073!4.73e-12!75;UBERON:0001016!4.73e-12!75;UBERON:0001017!5.37e-12!73;UBERON:0005743!5.37e-12!73;UBERON:0003056!2.07e-10!49;UBERON:0001049!4.41e-10!52;UBERON:0005068!4.41e-10!52;UBERON:0006241!4.41e-10!52;UBERON:0007135!4.41e-10!52;UBERON:0002791!5.34e-10!29;UBERON:0003528!5.34e-10!29;UBERON:0001893!5.34e-10!29;UBERON:0002616!9.32e-10!49;UBERON:0000955!1.06e-09!50;UBERON:0006238!1.06e-09!50;UBERON:0002346!1.22e-09!71;UBERON:0003075!1.22e-09!71;UBERON:0007284!1.22e-09!71;UBERON:0003080!4.85e-08!40;UBERON:0002780!6.87e-08!39;UBERON:0001890!6.87e-08!39;UBERON:0006240!6.87e-08!39;UBERON:0002619!2.16e-07!17;UBERON:0000956!6.65e-07!21;UBERON:0001869!6.65e-07!21;UBERON:0000203!6.65e-07!21;UBERON:0002021!8.40e-07!10;UBERON:0000411!8.40e-07!10;UBERON:0001950!8.40e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0002020,6.38e-15,34;UBERON:0010371,3.59e-14,73;UBERON:0001017,1.21e-12,73;UBERON:0000073,1.67e-12,54;UBERON:0001016,6.55e-12,75;UBERON:0003528,3.06e-11,29;UBERON:0002791,3.06e-11,29;UBERON:0001893,3.06e-11,29;UBERON:0002346,6.54e-11,64;UBERON:0003075,6.54e-11,64;UBERON:0007284,6.54e-11,64;UBERON:0001049,4.63e-10,52;UBERON:0005068,4.63e-10,52;UBERON:0006241,4.63e-10,52;UBERON:0007135,4.63e-10,52;UBERON:0003056,1.03e-09,49;UBERON:0002021,1.09e-08,10;UBERON:0000411,1.09e-08,10;UBERON:0001950,1.09e-08,10;UBERON:0002619,1.83e-08,17;UBERON:0003080,8.35e-08,40;UBERON:0000956,9.20e-08,21;UBERON:0001869,9.20e-08,21;UBERON:0000203,9.20e-08,21;UBERON:0002780,1.32e-07,39;UBERON:0001890,1.32e-07,39;UBERON:0006240,1.32e-07,39;UBERON:0002616,1.42e-07,46;UBERON:0000955,3.12e-07,47;UBERON:0006238,3.12e-07,47 | |||
|phase1_expression=50.2867379909053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.1330713617802,0.709638518536602,3.30384153891027,3.9119567217402,14.171635164729,14.0599156950062,7.38833616482277,6.7193482380174,5.75010257459886,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,1.41621522601718,2.64495489636016,1.90149421051854,6.77689064138264,8.89294796111139,0,0.988866362566974,0,2.09720077362883,3.07374644257244,0.311068836925433,0,1.26194976810829,4.28476476605705,8.1721360152097,0.489963196859816,0.575072826109418,0,5.50579404996943,2.93680877595932,5.52983519722476,1.18697658957174,0.548925861614458,2.08365348222704,3.35019598801657,4.50210088025344,4.5839474333043,2.94628585473668,4.27115042397309,1.86399445825301,0.908714319998209,0.226714680320357,0,0,0,0,0,0,0.280888840263504,1.1930122580464,1.03914401841148,2.12003744706204,26.4785629180159,2.56652954828636,2.54805239706646,0,0.432982082022428,1.01343946190039,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,2.74500361691176,1.7591609295801,1.73824320192276,1.79000820131231,0.83115217823824,1.1356888414743,0.203678727700633,0.373220911830279,1.51633655060205,1.26265113531884,2.34216797332867,2.06911893990126,2.52086981727489,2.10986744970001,1.02054748726992,0.640568601424249,0.843315521037559,1.29351685369508,0,1.51284864134255,1.93546236580344,2.41115305670332,2.78047249225598,2.78601733217733,2.05782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.05144974282064,2.77842453424068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0.509235257325564,0,3.01511263395268,5.47500374037832,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,0.642202359951168,0.937693492737625,1.80328439914343,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0,0,0,0,0.321321316421807,0.141940085208269,0.712262414669021,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,1.08036656418786,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,1.40803024838226,0.42366414172764,1.32317038832977,3.2977250588296,3.39075296061402,1.38719727334758,2.26807453605959,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.18805874903981,2.50905955217362,2.62035076495413,1.75323650300267,0.578574190077352,1.04702376793612,0,2.4853572523477,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0.632022241256357,0.608175645870493,2.05421914329655,1.94881234466693,1.07416017400489,0.39736270956253,0.360586348559907,1.18151621739662,0.807731599585181,0.15241361331,0.705783295957884,0.194915761479505,0.192423683280659,0.233753804363138,4.0811469050738,1.33191572024439,0.62799699626633,0.839423081820392,1.35232715822533,0.375364950902364,0,0.857473516316263,2.00628841614145,2.25900737046827,3.22227665555024,2.29158205375759,4.1244763762485,3.42541259885321,3.7769694869485,2.70009000092722,2.2516060161211,4.53142408984205,2.5888015587591,0.103787347584177,0,1.36586884603307,2.18796045361465,0.838452650511929,1.10306105070008,1.11123363900808,1.85431551515005,1.28367683836726,0.758091635291392,2.02783439912192,1.50901073108861,1.12369808963859,1.47257850531199,1.49332219284595,1.42888107384922,1.62238056322798,0.964546102318525,2.06042950401653,1.47198920134397,1.02860775715625,0.70990322463735,1.66905332963125,0.726732083161643,1.41164070622996,1.60767754994185,0.73171189149109,1.05227884575137,0.950628796921032,0.561142271657738,1.30498519936592,1.18205378850676,0,0.619747364743864,1.15743966588685,2.99772693525535,1.16965804222704,1.28922632428979,1.72159498861959,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Dlk2 | |||
}} |
Revision as of 14:39, 13 September 2013
Short description: | p2@Dlk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dlk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:47 |
Association with transcript: | 0bp_to_ENSMUST00000113490, ENSMUST00000166617, uc008csm.2_5end |
EntrezGene: | Dlk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.93e-09 | 44 |
neurectodermal cell | 1.93e-09 | 44 |
neural cell | 1.00e-08 | 43 |
oligodendrocyte precursor cell | 1.88e-08 | 8 |
CNS neuron (sensu Vertebrata) | 7.73e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.73e-08 | 23 |
oligodendrocyte | 3.25e-07 | 6 |
macroglial cell | 3.25e-07 | 6 |
astrocyte | 3.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.05e-17 | 95 |
ectoderm | 1.05e-17 | 95 |
presumptive ectoderm | 1.05e-17 | 95 |
gray matter | 6.38e-15 | 34 |
ecto-epithelium | 3.59e-14 | 73 |
central nervous system | 1.21e-12 | 73 |
regional part of nervous system | 1.67e-12 | 54 |
nervous system | 6.55e-12 | 75 |
brain grey matter | 3.06e-11 | 29 |
regional part of telencephalon | 3.06e-11 | 29 |
telencephalon | 3.06e-11 | 29 |
neurectoderm | 6.54e-11 | 64 |
neural plate | 6.54e-11 | 64 |
presumptive neural plate | 6.54e-11 | 64 |
neural tube | 4.63e-10 | 52 |
neural rod | 4.63e-10 | 52 |
future spinal cord | 4.63e-10 | 52 |
neural keel | 4.63e-10 | 52 |
pre-chordal neural plate | 1.03e-09 | 49 |
occipital lobe | 1.09e-08 | 10 |
visual cortex | 1.09e-08 | 10 |
neocortex | 1.09e-08 | 10 |
regional part of cerebral cortex | 1.83e-08 | 17 |
anterior neural tube | 8.35e-08 | 40 |
cerebral cortex | 9.20e-08 | 21 |
cerebral hemisphere | 9.20e-08 | 21 |
pallium | 9.20e-08 | 21 |
regional part of forebrain | 1.32e-07 | 39 |
forebrain | 1.32e-07 | 39 |
future forebrain | 1.32e-07 | 39 |
regional part of brain | 1.42e-07 | 46 |
brain | 3.12e-07 | 47 |
future brain | 3.12e-07 | 47 |
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