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FFCP PHASE1:Mm9::chr18:33623512..33623558,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27528|HGNC=|UniProt=Q07475,Q542Q5|association_with_transcript=-111bp_to_ENSMUST00000171533,NM_001109989,uc012bav.1_5end|description=CAGE_peak_6_at_D0H4S114_5end|id=chr18:33623512..33623558,-|ontology_enrichment_celltype=CL:0000117!1.66e-11!23;CL:0000337!1.66e-11!23;CL:0000540!1.70e-07!33;CL:0000047!1.70e-07!33;CL:0000031!1.70e-07!33;CL:0000404!1.70e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.24e-12,23;CL:0000337,8.24e-12,23;CL:0000540,1.23e-07,33;CL:0000047,1.23e-07,33;CL:0000031,1.23e-07,33;CL:0000404,1.23e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!4.51e-13!49;UBERON:0002346!1.62e-12!71;UBERON:0003075!1.62e-12!71;UBERON:0007284!1.62e-12!71;UBERON:0000033!1.95e-12!63;UBERON:0002020!5.62e-11!34;UBERON:0001049!9.53e-11!52;UBERON:0005068!9.53e-11!52;UBERON:0006241!9.53e-11!52;UBERON:0007135!9.53e-11!52;UBERON:0000468!1.00e-10!333;UBERON:0001017!5.04e-10!73;UBERON:0005743!5.04e-10!73;UBERON:0003080!1.75e-09!40;UBERON:0002780!1.86e-09!39;UBERON:0001890!1.86e-09!39;UBERON:0006240!1.86e-09!39;UBERON:0000955!1.88e-09!50;UBERON:0006238!1.88e-09!50;UBERON:0004121!2.10e-09!102;UBERON:0000924!2.10e-09!102;UBERON:0006601!2.10e-09!102;UBERON:0000025!3.53e-09!114;UBERON:0000073!5.21e-09!75;UBERON:0001016!5.21e-09!75;UBERON:0002616!6.04e-09!49;UBERON:0000922!4.27e-08!328;UBERON:0004111!4.32e-08!122;UBERON:0002791!4.97e-08!29;UBERON:0003528!4.97e-08!29;UBERON:0001893!4.97e-08!29;UBERON:0000479!2.04e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.12e-15,92;UBERON:0002346,8.03e-14,64;UBERON:0003075,8.03e-14,64;UBERON:0007284,8.03e-14,64;UBERON:0003056,6.04e-13,49;UBERON:0010371,7.13e-12,73;UBERON:0000073,1.14e-11,54;UBERON:0002020,9.32e-11,34;UBERON:0001049,1.02e-10,52;UBERON:0005068,1.02e-10,52;UBERON:0006241,1.02e-10,52;UBERON:0007135,1.02e-10,52;UBERON:0001017,8.98e-10,73;UBERON:0004121,1.51e-09,95;UBERON:0000924,1.51e-09,95;UBERON:0006601,1.51e-09,95;UBERON:0003080,2.73e-09,40;UBERON:0002780,2.93e-09,39;UBERON:0001890,2.93e-09,39;UBERON:0006240,2.93e-09,39;UBERON:0001016,7.99e-09,75;UBERON:0000955,1.37e-08,47;UBERON:0006238,1.37e-08,47;UBERON:0000025,1.47e-08,114;UBERON:0002616,4.37e-08,46;UBERON:0003528,8.96e-08,29;UBERON:0002791,8.96e-08,29;UBERON:0001893,8.96e-08,29;UBERON:0004111,2.07e-07,122|phase1_expression=7.36684696682052,0,0,0,0,0.839396359559449,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.47997726838022,0.91763712426868,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,2.61630187656536,0.659058548203415,0.972149495371417,0.839918529752175,0,0,0,0,0.771778308107841,0.85960031981627,1.03134418455488,18.8154308599426,17.9856932952491,18.3811107016792,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,4.2264013585371,4.25127410464758,6.48028503992115,6.52007380189284,19.9955689082663,17.8903518170807,7.96190194897201,9.20116521775069,12.8690630125403,6.60695285996332,6.63974158042976,5.37622866396852,20.5742608859102,30.373897676,21.3574481928272,5.862842979029,7.87867654044352,3.81995619442025,14.142172102736,17.5117167382897,19.0127434741807,0,0.0755715601067855,2.02905142091174,0.860423876981386,0,1.07940638327563,0.649776417447669,0.448026887097336,1.82577746171277,1.70430322578058,4.93593408745451,1.41335829804136,5.63373679106722,2.56652954828636,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0.593768556259299,3.46970653532272,3.34912026143355,2.30615497256059,4.06951129492081,4.35078216402108,1.25666591329675,1.97755974187499,0.86759614151947,1.76922110389975,5.98537344805414,1.98757366614354,0.484875253135222,1.86391761218122,3.22058876712702,1.46612694769419,0.510914110417183,0,0,0,4.49371918214468,7.77751024791665,18.3455354084782,4.86708096538374,4.60287823194595,4.77912502486988,6.81413304884582,10.8968119319838,1.8661045591514,0.252722758433675,2.52530227063769,7.28674480591141,13.3343220571414,14.0448461248172,13.1113191517072,9.5251098811859,6.53379973452734,8.99536555773397,8.79591460512653,8.40715172438085,8.13156144721623,10.7330185740009,8.32943783224784,4.17070873838397,3.83077383174383,4.7329891373827,6.76716507182877,0,0,0,5.17814431338755,4.69052119962192,4.50155153652537,4.7348947117042,7.08351234290654,7.0962871928194,6.27841650826101,6.17028823219124,6.889155199663,10.3672705445493,9.52171291658752,7.05298643048945,5.99419948443863,3.95190207523891,3.48936688776967,2.94405927989778,6.89460902941206,0,0,7.89166526980366,4.41249676534833,5.92790322081629,3.22693639397348,4.00280478920767,2.28270751335071,1.42358718463353,3.45867804920423,3.2673577144035,4.77495532898762,3.31438948102504,5.39291645192533,1.29682829924817,0.796565093017469,12.5180814629034,6.16941968092536,12.3978509240388,5.29493452397817,7.37019451236978,7.925347647606,5.75452487830741,2.21415221969403,1.72698600625512,0.86378014745260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|EntrezGene=27528
|HGNC=
|UniProt=Q07475,Q542Q5
|association_with_transcript=-111bp_to_ENSMUST00000171533,NM_001109989,uc012bav.1_5end
|description=CAGE_peak_6_at_D0H4S114_5end
|id=chr18:33623512..33623558,-
|ontology_enrichment_celltype=CL:0000117!1.66e-11!23;CL:0000337!1.66e-11!23;CL:0000540!1.70e-07!33;CL:0000047!1.70e-07!33;CL:0000031!1.70e-07!33;CL:0000404!1.70e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,8.24e-12,23;CL:0000337,8.24e-12,23;CL:0000540,1.23e-07,33;CL:0000047,1.23e-07,33;CL:0000031,1.23e-07,33;CL:0000404,1.23e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!4.51e-13!49;UBERON:0002346!1.62e-12!71;UBERON:0003075!1.62e-12!71;UBERON:0007284!1.62e-12!71;UBERON:0000033!1.95e-12!63;UBERON:0002020!5.62e-11!34;UBERON:0001049!9.53e-11!52;UBERON:0005068!9.53e-11!52;UBERON:0006241!9.53e-11!52;UBERON:0007135!9.53e-11!52;UBERON:0000468!1.00e-10!333;UBERON:0001017!5.04e-10!73;UBERON:0005743!5.04e-10!73;UBERON:0003080!1.75e-09!40;UBERON:0002780!1.86e-09!39;UBERON:0001890!1.86e-09!39;UBERON:0006240!1.86e-09!39;UBERON:0000955!1.88e-09!50;UBERON:0006238!1.88e-09!50;UBERON:0004121!2.10e-09!102;UBERON:0000924!2.10e-09!102;UBERON:0006601!2.10e-09!102;UBERON:0000025!3.53e-09!114;UBERON:0000073!5.21e-09!75;UBERON:0001016!5.21e-09!75;UBERON:0002616!6.04e-09!49;UBERON:0000922!4.27e-08!328;UBERON:0004111!4.32e-08!122;UBERON:0002791!4.97e-08!29;UBERON:0003528!4.97e-08!29;UBERON:0001893!4.97e-08!29;UBERON:0000479!2.04e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.12e-15,92;UBERON:0002346,8.03e-14,64;UBERON:0003075,8.03e-14,64;UBERON:0007284,8.03e-14,64;UBERON:0003056,6.04e-13,49;UBERON:0010371,7.13e-12,73;UBERON:0000073,1.14e-11,54;UBERON:0002020,9.32e-11,34;UBERON:0001049,1.02e-10,52;UBERON:0005068,1.02e-10,52;UBERON:0006241,1.02e-10,52;UBERON:0007135,1.02e-10,52;UBERON:0001017,8.98e-10,73;UBERON:0004121,1.51e-09,95;UBERON:0000924,1.51e-09,95;UBERON:0006601,1.51e-09,95;UBERON:0003080,2.73e-09,40;UBERON:0002780,2.93e-09,39;UBERON:0001890,2.93e-09,39;UBERON:0006240,2.93e-09,39;UBERON:0001016,7.99e-09,75;UBERON:0000955,1.37e-08,47;UBERON:0006238,1.37e-08,47;UBERON:0000025,1.47e-08,114;UBERON:0002616,4.37e-08,46;UBERON:0003528,8.96e-08,29;UBERON:0002791,8.96e-08,29;UBERON:0001893,8.96e-08,29;UBERON:0004111,2.07e-07,122
|phase1_expression=7.36684696682052,0,0,0,0,0.839396359559449,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.47997726838022,0.91763712426868,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,2.61630187656536,0.659058548203415,0.972149495371417,0.839918529752175,0,0,0,0,0.771778308107841,0.85960031981627,1.03134418455488,18.8154308599426,17.9856932952491,18.3811107016792,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,4.2264013585371,4.25127410464758,6.48028503992115,6.52007380189284,19.9955689082663,17.8903518170807,7.96190194897201,9.20116521775069,12.8690630125403,6.60695285996332,6.63974158042976,5.37622866396852,20.5742608859102,30.373897676,21.3574481928272,5.862842979029,7.87867654044352,3.81995619442025,14.142172102736,17.5117167382897,19.0127434741807,0,0.0755715601067855,2.02905142091174,0.860423876981386,0,1.07940638327563,0.649776417447669,0.448026887097336,1.82577746171277,1.70430322578058,4.93593408745451,1.41335829804136,5.63373679106722,2.56652954828636,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0.593768556259299,3.46970653532272,3.34912026143355,2.30615497256059,4.06951129492081,4.35078216402108,1.25666591329675,1.97755974187499,0.86759614151947,1.76922110389975,5.98537344805414,1.98757366614354,0.484875253135222,1.86391761218122,3.22058876712702,1.46612694769419,0.510914110417183,0,0,0,4.49371918214468,7.77751024791665,18.3455354084782,4.86708096538374,4.60287823194595,4.77912502486988,6.81413304884582,10.8968119319838,1.8661045591514,0.252722758433675,2.52530227063769,7.28674480591141,13.3343220571414,14.0448461248172,13.1113191517072,9.5251098811859,6.53379973452734,8.99536555773397,8.79591460512653,8.40715172438085,8.13156144721623,10.7330185740009,8.32943783224784,4.17070873838397,3.83077383174383,4.7329891373827,6.76716507182877,0,0,0,5.17814431338755,4.69052119962192,4.50155153652537,4.7348947117042,7.08351234290654,7.0962871928194,6.27841650826101,6.17028823219124,6.889155199663,10.3672705445493,9.52171291658752,7.05298643048945,5.99419948443863,3.95190207523891,3.48936688776967,2.94405927989778,6.89460902941206,0,0,7.89166526980366,4.41249676534833,5.92790322081629,3.22693639397348,4.00280478920767,2.28270751335071,1.42358718463353,3.45867804920423,3.2673577144035,4.77495532898762,3.31438948102504,5.39291645192533,1.29682829924817,0.796565093017469,12.5180814629034,6.16941968092536,12.3978509240388,5.29493452397817,7.37019451236978,7.925347647606,5.75452487830741,2.21415221969403,1.72698600625512,0.863780147452604,1.1858105083486,1.50160595144485,1.76903095601883,2.02375901146368,1.01430060694251,2.17059443777175,3.05551022137704,3.45235364940973,1.62135226775035,3.0201755450689,4.31304619582064,3.72140947668503,4.99260276983297,3.03094653536534,2.69096120282868,1.4473305640901,1.84753190166605,3.22135400009824,4.4000543639347,3.05541154395339,6.57132695207806,9.88286918906713,11.6641384034147,4.48807390072937,7.56648691709717,5.3151525515706,6.53764551495697,5.73521601505083,4.48980952851328,3.47157740595628,0,0,2.45882136509518,3.03530420935206,3.69266356971921,5.50894926983355,0,3.53459298086122,2.2085575359138,1.95219372148319,4.09304455692318,0,1.33679204449436,0.566153061577665,1.21443210502468,2.33804686329049,1.58115111178609,13.4954952897159,4.40014264145633,10.3278050127008,9.77321756121457,2.3095817216155,0,5.58395463156457,3.93020624054176,3.96070667487386,4.13422650033082,4.61152721915891,3.35956781118687,6.90714086007261,6.41695281092498,4.10847785316561,1.05418608574999,0,4.42571487479924,6.12207719706455,6.07985813778946,4.92975180572662,6.0295679438373,4.45922044005176,5.10101963866575,4.87143918583359,0.704015124191131,0.847328283455281,0.661585194164886,0.49465875882444,2.58343082713449,2.35220407219808,0.954978752025092,0.656563598980245,2.04036585640896,3.70850604021019,0,2.47664241555867,2.40752885580625,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,0,7.11755985557555,6.91286188231286,5.83228840437727,5.85447228840512,3.27543845619266,4.04593039154462,5.78574190077352,1.57053565190418,4.66613903850454,0,0,4.33597983527538,7.44563207056939,6.02798683866548,8.39538852605252,6.42033276864957,9.62329356895182,5.208175393758,3.25063967719704,0.483168241652012,1.15212002503146,0,2.22997736819181,1.95150818613172,0.51968329191118,1.79026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,1.13365191807606,0,0,0,1.9318959403219,0.750729901804728,2.74727436400898,0.857473516316263,0,6.7770221114048,9.20650473014354,5.15605962095457,5.67115501734169,8.90607275701835,4.5323633843382,3.37511250115903,6.30449684513909,7.25027854374727,8.80192529978094,10.7938841487544,9.57659696162474,8.36594668195257,5.59145449257076,5.03071590307158,4.04455718590031,5.11167473943715,5.56294654545014,3.53011130550997,6.06473308233114,5.0695859978048,4.90428487603798,4.68207537349412,4.09760975391163,5.16919220600519,3.81034953026459,5.67833197129792,5.01563973205633,3.70877310722976,6.03515572551029,5.14303878578123,3.72699192934609,6.19934093863034,5.66851024866081,5.08190654242785,6.34609559187574,4.20734337607377,5.78753365163254,3.39510284614654,5.61142271657738,6.8808310512021,4.33419722452479,4.91077251803627,5.26785260032284,3.66522560864169,6.74488560432454,6.31615342802603,5.15690529715916,4.20834330551455,4.41182838239031,6.95603506861264
|short_description=p6@D0H4S114
}}

Revision as of 15:56, 13 September 2013

Short description:p6@D0H4S114
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_D0H4S114_5end
Coexpression cluster:NA
Association with transcript: -111bp_to_ENSMUST00000171533, NM_001109989, uc012bav.1_5end
EntrezGene:D0H4S114
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@D0H4S114

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F118.35
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C67.29
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C914.04
eyeball, embryo E17.CNhs11023.1261-18D413.11
eyeball, neonate N00.CNhs11207.633-15C69.53
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I210.37
heart, neonate N10.CNhs11118.749-24G19.52
heart, neonate N16.CNhs11209.782-15G17.05
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G77.93
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A95.79
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B79.62
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I810.79
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.24e-1223
neuroblast (sensu Vertebrata)8.24e-1223
neuron1.23e-0733
neuronal stem cell1.23e-0733
neuroblast1.23e-0733
electrically signaling cell1.23e-0733

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.12e-1592
neurectoderm8.03e-1464
neural plate8.03e-1464
presumptive neural plate8.03e-1464
pre-chordal neural plate6.04e-1349
ecto-epithelium7.13e-1273
regional part of nervous system1.14e-1154
gray matter9.32e-1134
neural tube1.02e-1052
neural rod1.02e-1052
future spinal cord1.02e-1052
neural keel1.02e-1052
central nervous system8.98e-1073
ectoderm-derived structure1.51e-0995
ectoderm1.51e-0995
presumptive ectoderm1.51e-0995
anterior neural tube2.73e-0940
regional part of forebrain2.93e-0939
forebrain2.93e-0939
future forebrain2.93e-0939
nervous system7.99e-0975
brain1.37e-0847
future brain1.37e-0847
tube1.47e-08114
regional part of brain4.37e-0846
brain grey matter8.96e-0829
regional part of telencephalon8.96e-0829
telencephalon8.96e-0829
anatomical conduit2.07e-07122







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