FFCP PHASE1:Hg19::chr6:112575838..112575847,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6484 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000455073_5end | |||
|coexpression_cluster_id=C2836 | |||
|description=CAGE_peak_6_at_LAMA4_5end | |||
|id=chr6:112575838..112575847,- | |||
|ontology_enrichment_celltype=CL:0000055!8.00e-20!180;CL:0000222!3.97e-17!119;CL:0000057!2.86e-13!75;CL:0000187!2.98e-12!54;CL:0002139!4.84e-12!24;CL:0000183!2.18e-11!59;CL:0000680!3.02e-11!57;CL:0000056!3.02e-11!57;CL:0000355!3.02e-11!57;CL:0000393!4.77e-10!60;CL:0000211!4.77e-10!60;CL:0000071!5.41e-10!18;CL:0002546!5.41e-10!18;CL:0000115!2.41e-09!35;CL:0000192!1.30e-08!42;CL:0000514!1.30e-08!42;CL:0002620!6.90e-08!23;CL:0000213!9.26e-08!57;CL:0000215!9.26e-08!57;CL:0002078!9.53e-08!44;CL:1000413!1.37e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.18e-19;24!CL:0000071;4.73e-17;18!CL:0000115;2.43e-14;36!CL:1000413;7.26e-12;9!CL:0002078;9.75e-10;45!CL:0002544;1.49e-08;6!CL:0002620;4.21e-08;23!CL:0000213;5.22e-07;58!CL:0000215;5.22e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.93e-20,24;CL:0000222,7.79e-19,121;CL:0000071,2.44e-17,18;CL:0002546,2.44e-17,18;CL:0000115,4.27e-16,36;CL:0002078,1.83e-13,45;CL:1000413,4.41e-12,9;CL:0000187,1.68e-11,55;CL:0000680,1.76e-10,58;CL:0000056,1.76e-10,58;CL:0000355,1.76e-10,58;CL:0000213,2.09e-10,58;CL:0000215,2.09e-10,58;CL:0000393,1.43e-09,61;CL:0000211,1.43e-09,61;CL:0002544,1.38e-08,6;CL:0000192,1.53e-08,43;CL:0000514,1.53e-08,43;CL:0002620,9.32e-08,23;CL:0000057,1.26e-07,76;CL:0000048,3.99e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002546;4.73e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.98e-20!79;UBERON:0007798!5.98e-20!79;UBERON:0001009!1.46e-16!113;UBERON:0004535!2.12e-16!110;UBERON:0000055!5.95e-16!69;UBERON:0004872!8.35e-16!84;UBERON:0001981!1.49e-15!60;UBERON:0007500!1.49e-15!60;UBERON:0004537!1.49e-15!60;UBERON:0006965!1.49e-15!60;UBERON:0001637!3.95e-13!42;UBERON:0003509!3.95e-13!42;UBERON:0004572!3.95e-13!42;UBERON:0000477!1.06e-12!286;UBERON:0003914!2.51e-12!118;UBERON:0000490!4.98e-12!138;UBERON:0000119!7.23e-12!312;UBERON:0004573!2.76e-11!33;UBERON:0004571!2.76e-11!33;UBERON:0004111!3.18e-11!241;UBERON:0000483!3.67e-11!309;UBERON:0000914!4.31e-11!83;UBERON:0002329!4.31e-11!83;UBERON:0003077!4.31e-11!83;UBERON:0003059!4.31e-11!83;UBERON:0007282!4.31e-11!83;UBERON:0009618!4.31e-11!83;UBERON:0007285!4.31e-11!83;UBERON:0002385!1.23e-10!63;UBERON:0001015!1.23e-10!63;UBERON:0000383!1.23e-10!63;UBERON:0000025!1.51e-10!194;UBERON:0004290!2.58e-10!70;UBERON:0001134!3.86e-10!61;UBERON:0002036!3.86e-10!61;UBERON:0003082!3.86e-10!61;UBERON:0000475!5.14e-10!365;UBERON:0001986!5.41e-10!18;UBERON:0004638!5.41e-10!18;UBERON:0004852!5.41e-10!18;UBERON:0006914!3.19e-08!25;UBERON:0000487!4.23e-08!22;UBERON:0000947!5.41e-08!21;UBERON:0010191!5.41e-08!21;UBERON:0003915!1.37e-07!9;UBERON:0004700!1.37e-07!9;UBERON:0001917!1.37e-07!9;UBERON:0000486!1.39e-07!82;UBERON:0005256!2.65e-07!143;UBERON:0000467!3.30e-07!625;UBERON:0000480!4.38e-07!626;UBERON:0000468!7.09e-07!659;UBERON:0000481!8.74e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.73e-17;18!UBERON:0001986;4.73e-17;18!UBERON:0004852;4.73e-17;18!UBERON:0006914;1.77e-15;25!UBERON:0000487;1.05e-14;22!UBERON:0004573;1.76e-14;33!UBERON:0004571;1.76e-14;33!UBERON:0001637;1.68e-13;42!UBERON:0003509;1.68e-13;42!UBERON:0004572;1.68e-13;42!UBERON:0003915;7.26e-12;9!UBERON:0004700;7.26e-12;9!UBERON:0001917;7.26e-12;9!UBERON:0000490;1.60e-10;33!UBERON:0000055;3.58e-10;65!UBERON:0000947;4.53e-10;21!UBERON:0010191;4.53e-10;21!UBERON:0007500;7.58e-10;56!UBERON:0001981;7.58e-10;56!UBERON:0004537;7.58e-10;56!UBERON:0002049;1.01e-08;75!UBERON:0007798;1.01e-08;75!UBERON:0003914;1.08e-07;74!UBERON:0004535;3.97e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.55e-20,78;UBERON:0007798,1.55e-20,78;UBERON:0004535,8.38e-19,109;UBERON:0000055,1.05e-18,68;UBERON:0001009,7.23e-18,112;UBERON:0004872,9.92e-18,83;UBERON:0004638,2.44e-17,18;UBERON:0001986,2.44e-17,18;UBERON:0004852,2.44e-17,18;UBERON:0007500,2.46e-17,59;UBERON:0001981,2.46e-17,59;UBERON:0004537,2.46e-17,59;UBERON:0006965,2.46e-17,59;UBERON:0001637,2.88e-16,42;UBERON:0003509,2.88e-16,42;UBERON:0004572,2.88e-16,42;UBERON:0006914,1.07e-15,25;UBERON:0000487,3.62e-15,22;UBERON:0003914,7.21e-15,117;UBERON:0004573,1.40e-14,33;UBERON:0004571,1.40e-14,33;UBERON:0000490,4.98e-14,148;UBERON:0003915,4.41e-12,9;UBERON:0004700,4.41e-12,9;UBERON:0001917,4.41e-12,9;UBERON:0007503,9.82e-11,78;UBERON:0007524,1.78e-10,73;UBERON:0002329,3.42e-10,71;UBERON:0003059,3.42e-10,71;UBERON:0007282,3.42e-10,71;UBERON:0004290,3.42e-10,71;UBERON:0009618,3.42e-10,71;UBERON:0000947,4.04e-10,21;UBERON:0010191,4.04e-10,21;UBERON:0003077,6.31e-10,72;UBERON:0007285,6.31e-10,72;UBERON:0002385,1.41e-09,64;UBERON:0001015,1.41e-09,64;UBERON:0000383,1.41e-09,64;UBERON:0001134,2.73e-09,62;UBERON:0002036,2.73e-09,62;UBERON:0003082,2.73e-09,62;UBERON:0000486,1.02e-08,83;UBERON:0000119,1.07e-08,309;UBERON:0000926,1.53e-08,315;UBERON:0004120,1.53e-08,315;UBERON:0006603,1.53e-08,315;UBERON:0000483,3.85e-08,306;UBERON:0005256,1.16e-07,122;UBERON:0004111,2.90e-07,240;UBERON:0000025,9.60e-07,192 | |||
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| |||
|short_description=p6@LAMA4 | |||
}} |
Revision as of 17:27, 13 September 2013
Short description: | p6@LAMA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LAMA4_5end |
Coexpression cluster: | C2836_Fibroblast_Endothelial_mature_Cardiac_Smooth_mesenchymal_Adipocyte |
Association with transcript: | 1bp_to_ENST00000455073_5end |
EntrezGene: | LAMA4 |
HGNC: | 6484 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.93e-20 | 24 |
mesodermal cell | 7.79e-19 | 121 |
blood vessel endothelial cell | 2.44e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-17 | 18 |
endothelial cell | 4.27e-16 | 36 |
meso-epithelial cell | 1.83e-13 | 45 |
endothelial cell of artery | 4.41e-12 | 9 |
muscle cell | 1.68e-11 | 55 |
muscle precursor cell | 1.76e-10 | 58 |
myoblast | 1.76e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-10 | 58 |
lining cell | 2.09e-10 | 58 |
barrier cell | 2.09e-10 | 58 |
electrically responsive cell | 1.43e-09 | 61 |
electrically active cell | 1.43e-09 | 61 |
aortic endothelial cell | 1.38e-08 | 6 |
smooth muscle cell | 1.53e-08 | 43 |
smooth muscle myoblast | 1.53e-08 | 43 |
skin fibroblast | 9.32e-08 | 23 |
fibroblast | 1.26e-07 | 76 |
multi fate stem cell | 3.99e-07 | 427 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.