FFCP PHASE1:Hg19::chr6:32410411..32410447,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3122|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=4947|TSSclassifier=W|UniProt=P01903|association_with_transcript=177bp_to_V00523_5end|coexpression_cluster_id=C187|description=CAGE_peak_6_at_HLA-DRA_5end|id=chr6:32410411..32410447,+|ontology_enrichment_celltype=CL:0002087!3.03e-54!119;CL:0000738!2.65e-53!140;CL:0002009!1.92e-48!65;CL:0002031!2.00e-48!124;CL:0002194!3.75e-46!63;CL:0000576!3.75e-46!63;CL:0000040!3.75e-46!63;CL:0000559!3.75e-46!63;CL:0000037!2.60e-45!172;CL:0000566!2.60e-45!172;CL:0000988!8.02e-44!182;CL:0002057!8.92e-44!42;CL:0002032!1.20e-43!165;CL:0000837!1.20e-43!165;CL:0000557!2.20e-42!71;CL:0000860!1.24e-39!45;CL:0000839!2.63e-39!70;CL:0000766!1.22e-37!76;CL:0000763!7.47e-33!112;CL:0000049!7.47e-33!112;CL:0000945!1.91e-18!24;CL:0000826!1.91e-18!24;CL:0000236!3.00e-12!14;CL:0000990!1.92e-11!8;CL:0000451!8.81e-11!10;CL:0000542!9.52e-10!53;CL:0000051!9.52e-10!53;CL:0000838!2.20e-09!52;CL:0002393!3.96e-09!9;CL:0002397!3.96e-09!9;CL:0000840!4.33e-08!5;CL:0001029!4.33e-08!5;CL:0000134!2.36e-07!358;CL:0000453!3.41e-07!5|ontology_enrichment_celltype_v019=CL:0000860;1.99e-56;33!CL:0002057;1.99e-56;33!CL:0000473;7.09e-56;39!CL:0000234;7.09e-56;39!CL:0000576;9.34e-48;48!CL:0000766;3.16e-32;69!CL:0000738;4.82e-21;136!CL:0000236;3.42e-20;13!CL:0002087;6.08e-20;104!CL:0000990;9.36e-20;8!CL:0000451;5.56e-19;10!CL:0000763;1.86e-16;100!CL:0000945;4.30e-15;24!CL:0000840;1.50e-13;5!CL:0000235;9.68e-13;6!CL:0000453;6.07e-12;5!CL:0002393;2.66e-11;6!CL:0002397;2.66e-11;6!CL:0000988;3.55e-10;177!CL:0000219;6.31e-09;193!CL:0002619;9.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0002009,6.77e-94,61;CL:0002194,1.50e-89,59;CL:0000576,1.50e-89,59;CL:0000040,1.50e-89,59;CL:0000559,1.50e-89,59;CL:0000473,3.09e-85,48;CL:0000234,3.09e-85,48;CL:0000557,4.17e-84,67;CL:0000738,1.52e-81,136;CL:0000839,1.82e-78,66;CL:0002087,5.56e-78,115;CL:0000766,2.80e-76,72;CL:0000860,1.56e-73,42;CL:0002057,1.56e-73,42;CL:0002031,2.14e-72,120;CL:0000037,1.61e-67,168;CL:0002032,9.81e-64,161;CL:0000837,9.81e-64,161;CL:0000763,3.79e-63,108;CL:0000049,3.79e-63,108;CL:0000988,5.19e-63,177;CL:0000236,9.31e-22,14;CL:0000134,1.07e-21,354;CL:0002320,7.24e-21,361;CL:0000990,8.27e-20,8;CL:0000451,4.58e-19,10;CL:0000219,6.04e-18,386;CL:0000034,3.38e-15,441;CL:0000945,4.20e-15,24;CL:0000826,4.20e-15,24;CL:0000048,2.15e-14,427;CL:0000723,6.62e-14,433;CL:0000840,1.29e-13,5;CL:0001029,1.29e-13,5;CL:0002393,9.66e-13,9;CL:0002397,9.66e-13,9;CL:0000235,1.27e-12,6;CL:0000453,5.71e-12,5|ontology_enrichment_development_v019=CL:0002057;2.11e-52;42!CL:0000049;8.75e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.66e-42!102;UBERON:0003061!1.66e-42!102;UBERON:0002193!6.50e-39!112;UBERON:0002371!1.79e-37!80;UBERON:0001474!3.02e-33!86;UBERON:0002405!6.54e-30!115;UBERON:0004765!6.99e-26!101;UBERON:0001434!6.99e-26!101;UBERON:0007023!3.98e-17!115;UBERON:0003081!2.27e-12!216;UBERON:0002204!8.75e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.73e-72,76;UBERON:0001474,7.67e-66,82;UBERON:0002390,7.49e-59,98;UBERON:0003061,7.49e-59,98;UBERON:0004765,1.42e-58,90;UBERON:0002405,1.72e-58,93;UBERON:0002193,6.00e-54,108;UBERON:0001434,4.08e-51,100;UBERON:0002204,2.53e-25,167;UBERON:0003081,7.41e-25,203;UBERON:0002384,9.83e-20,371;UBERON:0000926,9.83e-11,315;UBERON:0004120,9.83e-11,315;UBERON:0006603,9.83e-11,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.916960868975415,0.903106483949403,1.10195093839151,1.96682138424452,0,1.23852898652861,0,0,0,0.619737604642413,0.426507697462265,0,1.66198622559563,1.00272223735071,1.95309783644267,3.13481663935894,4.53451132426571,3.09090681161024,3.48955773070955,7.55751887377619,9.21819432513701,5.57829688573643,10.6903650885675,7.12324653058738,4.60307827715441,8.19714260893122,5.43909128743746,4.82643953031266,9.68227025375739,5.41705946377367,4.1413314699373,8.73299680185107,6.06753408001728,7.65209730927256,8.02322567690234,6.39337125799041,5.60747210317417,8.7764009353518,7.6720455095885,5.5139755339431,9.64554881974938,8.09668923694247,6.28121663141858,9.38669253156363,4.56096573880745,7.87019353423379,6.62899744777616,7.59509729858123,5.28138215779854,5.10250319916104,3.56419697364239,2.2465726229299,2.4028302854641,0.48217676009124,0.570025487482497,4.17725022118089,1.64397738388171,3.51992488922645,3.82297027883492,5.33705552318133,4.26730222566507,4.00395987036012,4.02326707968138,4.62731410949403,2.86216126360609,4.55370375287559,4.11066032559657,4.96955196562797,1.32171328579026,1.12101712596307,1.58030450865046,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,8.43823223502177,8.7064868649633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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4947 | |||
|TSSclassifier=W | |||
|UniProt=P01903 | |||
|association_with_transcript=177bp_to_V00523_5end | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_6_at_HLA-DRA_5end | |||
|id=chr6:32410411..32410447,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.03e-54!119;CL:0000738!2.65e-53!140;CL:0002009!1.92e-48!65;CL:0002031!2.00e-48!124;CL:0002194!3.75e-46!63;CL:0000576!3.75e-46!63;CL:0000040!3.75e-46!63;CL:0000559!3.75e-46!63;CL:0000037!2.60e-45!172;CL:0000566!2.60e-45!172;CL:0000988!8.02e-44!182;CL:0002057!8.92e-44!42;CL:0002032!1.20e-43!165;CL:0000837!1.20e-43!165;CL:0000557!2.20e-42!71;CL:0000860!1.24e-39!45;CL:0000839!2.63e-39!70;CL:0000766!1.22e-37!76;CL:0000763!7.47e-33!112;CL:0000049!7.47e-33!112;CL:0000945!1.91e-18!24;CL:0000826!1.91e-18!24;CL:0000236!3.00e-12!14;CL:0000990!1.92e-11!8;CL:0000451!8.81e-11!10;CL:0000542!9.52e-10!53;CL:0000051!9.52e-10!53;CL:0000838!2.20e-09!52;CL:0002393!3.96e-09!9;CL:0002397!3.96e-09!9;CL:0000840!4.33e-08!5;CL:0001029!4.33e-08!5;CL:0000134!2.36e-07!358;CL:0000453!3.41e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-56;33!CL:0002057;1.99e-56;33!CL:0000473;7.09e-56;39!CL:0000234;7.09e-56;39!CL:0000576;9.34e-48;48!CL:0000766;3.16e-32;69!CL:0000738;4.82e-21;136!CL:0000236;3.42e-20;13!CL:0002087;6.08e-20;104!CL:0000990;9.36e-20;8!CL:0000451;5.56e-19;10!CL:0000763;1.86e-16;100!CL:0000945;4.30e-15;24!CL:0000840;1.50e-13;5!CL:0000235;9.68e-13;6!CL:0000453;6.07e-12;5!CL:0002393;2.66e-11;6!CL:0002397;2.66e-11;6!CL:0000988;3.55e-10;177!CL:0000219;6.31e-09;193!CL:0002619;9.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.77e-94,61;CL:0002194,1.50e-89,59;CL:0000576,1.50e-89,59;CL:0000040,1.50e-89,59;CL:0000559,1.50e-89,59;CL:0000473,3.09e-85,48;CL:0000234,3.09e-85,48;CL:0000557,4.17e-84,67;CL:0000738,1.52e-81,136;CL:0000839,1.82e-78,66;CL:0002087,5.56e-78,115;CL:0000766,2.80e-76,72;CL:0000860,1.56e-73,42;CL:0002057,1.56e-73,42;CL:0002031,2.14e-72,120;CL:0000037,1.61e-67,168;CL:0002032,9.81e-64,161;CL:0000837,9.81e-64,161;CL:0000763,3.79e-63,108;CL:0000049,3.79e-63,108;CL:0000988,5.19e-63,177;CL:0000236,9.31e-22,14;CL:0000134,1.07e-21,354;CL:0002320,7.24e-21,361;CL:0000990,8.27e-20,8;CL:0000451,4.58e-19,10;CL:0000219,6.04e-18,386;CL:0000034,3.38e-15,441;CL:0000945,4.20e-15,24;CL:0000826,4.20e-15,24;CL:0000048,2.15e-14,427;CL:0000723,6.62e-14,433;CL:0000840,1.29e-13,5;CL:0001029,1.29e-13,5;CL:0002393,9.66e-13,9;CL:0002397,9.66e-13,9;CL:0000235,1.27e-12,6;CL:0000453,5.71e-12,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-52;42!CL:0000049;8.75e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.66e-42!102;UBERON:0003061!1.66e-42!102;UBERON:0002193!6.50e-39!112;UBERON:0002371!1.79e-37!80;UBERON:0001474!3.02e-33!86;UBERON:0002405!6.54e-30!115;UBERON:0004765!6.99e-26!101;UBERON:0001434!6.99e-26!101;UBERON:0007023!3.98e-17!115;UBERON:0003081!2.27e-12!216;UBERON:0002204!8.75e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.73e-72,76;UBERON:0001474,7.67e-66,82;UBERON:0002390,7.49e-59,98;UBERON:0003061,7.49e-59,98;UBERON:0004765,1.42e-58,90;UBERON:0002405,1.72e-58,93;UBERON:0002193,6.00e-54,108;UBERON:0001434,4.08e-51,100;UBERON:0002204,2.53e-25,167;UBERON:0003081,7.41e-25,203;UBERON:0002384,9.83e-20,371;UBERON:0000926,9.83e-11,315;UBERON:0004120,9.83e-11,315;UBERON:0006603,9.83e-11,315 | |||
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| |||
|short_description=p6@HLA-DRA | |||
}} |
Revision as of 20:23, 13 September 2013
Short description: | p6@HLA-DRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HLA-DRA_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 177bp_to_V00523_5end |
EntrezGene: | HLA-DRA |
HGNC: | 4947 |
UniProt: | P01903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.73e-72 | 76 |
bone element | 7.67e-66 | 82 |
hematopoietic system | 7.49e-59 | 98 |
blood island | 7.49e-59 | 98 |
skeletal element | 1.42e-58 | 90 |
immune system | 1.72e-58 | 93 |
hemolymphoid system | 6.00e-54 | 108 |
skeletal system | 4.08e-51 | 100 |
musculoskeletal system | 2.53e-25 | 167 |
lateral plate mesoderm | 7.41e-25 | 203 |
connective tissue | 9.83e-20 | 371 |
mesoderm | 9.83e-11 | 315 |
mesoderm-derived structure | 9.83e-11 | 315 |
presumptive mesoderm | 9.83e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.