FFCP PHASE1:Mm9::chr2:79825880..79825884,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:79825880..79825884,-|id=chr2:79825880..79825884,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.76e-07,3;CL:0000737,1.76e-07,3;CL:0000746,1.76e-07,3;CL:0000513,1.76e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.91e-10!10;UBERON:0000411!7.91e-10!10;UBERON:0001950!7.91e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-43,10;UBERON:0000411,6.39e-43,10;UBERON:0001950,6.39e-43,10;UBERON:0002619,1.76e-30,17;UBERON:0000956,1.94e-24,21;UBERON:0001869,1.94e-24,21;UBERON:0000203,1.94e-24,21;UBERON:0003528,2.43e-17,29;UBERON:0002791,2.43e-17,29;UBERON:0001893,2.43e-17,29;UBERON:0002780,3.27e-15,39;UBERON:0001890,3.27e-15,39;UBERON:0006240,3.27e-15,39;UBERON:0003080,8.58e-15,40;UBERON:0002020,1.36e-14,34;UBERON:0002616,1.16e-12,46;UBERON:0000955,2.33e-12,47;UBERON:0006238,2.33e-12,47;UBERON:0003056,8.61e-12,49;UBERON:0001049,5.08e-11,52;UBERON:0005068,5.08e-11,52;UBERON:0006241,5.08e-11,52;UBERON:0007135,5.08e-11,52;UBERON:0000073,1.49e-10,54;UBERON:0002346,1.18e-08,64;UBERON:0003075,1.18e-08,64;UBERON:0007284,1.18e-08,64;UBERON:0010314,6.29e-08,92;UBERON:0010371,2.18e-07,73;UBERON:0001017,2.18e-07,73;UBERON:0001016,3.80e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.916789486660861,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.869121600961382,1.02286182932132,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0,0.32833492815819,0.162137619091711,0,0,0.134206418760372,1.26173969138476,0.205809224758569,0,0,0.639864751605702,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.0701358198903186,0.569128834118316,1.18088118383682,1.255989822731,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0,0,0,0,0.325929952884052,0.678980343100753,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.406638934253697,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.0826534557253359,0.523511883968059,0.388844919875379,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.629156066554265,0,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,4.64003592327956,4.11049511862385,3.0215755895588,10.1253375034771,1.80128481289688,6.79713613476307,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.565879024158229,0,0,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.436039249896986,0.658765662907314,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr2:79825880..79825884,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:79825880..79825884,- | |||
|id=chr2:79825880..79825884,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.76e-07,3;CL:0000737,1.76e-07,3;CL:0000746,1.76e-07,3;CL:0000513,1.76e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.91e-10!10;UBERON:0000411!7.91e-10!10;UBERON:0001950!7.91e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-43,10;UBERON:0000411,6.39e-43,10;UBERON:0001950,6.39e-43,10;UBERON:0002619,1.76e-30,17;UBERON:0000956,1.94e-24,21;UBERON:0001869,1.94e-24,21;UBERON:0000203,1.94e-24,21;UBERON:0003528,2.43e-17,29;UBERON:0002791,2.43e-17,29;UBERON:0001893,2.43e-17,29;UBERON:0002780,3.27e-15,39;UBERON:0001890,3.27e-15,39;UBERON:0006240,3.27e-15,39;UBERON:0003080,8.58e-15,40;UBERON:0002020,1.36e-14,34;UBERON:0002616,1.16e-12,46;UBERON:0000955,2.33e-12,47;UBERON:0006238,2.33e-12,47;UBERON:0003056,8.61e-12,49;UBERON:0001049,5.08e-11,52;UBERON:0005068,5.08e-11,52;UBERON:0006241,5.08e-11,52;UBERON:0007135,5.08e-11,52;UBERON:0000073,1.49e-10,54;UBERON:0002346,1.18e-08,64;UBERON:0003075,1.18e-08,64;UBERON:0007284,1.18e-08,64;UBERON:0010314,6.29e-08,92;UBERON:0010371,2.18e-07,73;UBERON:0001017,2.18e-07,73;UBERON:0001016,3.80e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.916789486660861,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.869121600961382,1.02286182932132,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0,0.32833492815819,0.162137619091711,0,0,0.134206418760372,1.26173969138476,0.205809224758569,0,0,0.639864751605702,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.0701358198903186,0.569128834118316,1.18088118383682,1.255989822731,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0,0,0,0,0.325929952884052,0.678980343100753,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.406638934253697,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.0826534557253359,0.523511883968059,0.388844919875379,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.629156066554265,0,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,4.64003592327956,4.11049511862385,3.0215755895588,10.1253375034771,1.80128481289688,6.79713613476307,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.565879024158229,0,0,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.436039249896986,0.658765662907314,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr2:79825880..79825884,- | |||
}} |
Revision as of 00:43, 14 September 2013
Short description: | p@chr2:79825880..79825884, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79825880..79825884, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.76e-07 | 3 |
striated muscle cell | 1.76e-07 | 3 |
cardiac muscle cell | 1.76e-07 | 3 |
cardiac muscle myoblast | 1.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.39e-43 | 10 |
visual cortex | 6.39e-43 | 10 |
neocortex | 6.39e-43 | 10 |
regional part of cerebral cortex | 1.76e-30 | 17 |
cerebral cortex | 1.94e-24 | 21 |
cerebral hemisphere | 1.94e-24 | 21 |
pallium | 1.94e-24 | 21 |
brain grey matter | 2.43e-17 | 29 |
regional part of telencephalon | 2.43e-17 | 29 |
telencephalon | 2.43e-17 | 29 |
regional part of forebrain | 3.27e-15 | 39 |
forebrain | 3.27e-15 | 39 |
future forebrain | 3.27e-15 | 39 |
anterior neural tube | 8.58e-15 | 40 |
gray matter | 1.36e-14 | 34 |
regional part of brain | 1.16e-12 | 46 |
brain | 2.33e-12 | 47 |
future brain | 2.33e-12 | 47 |
pre-chordal neural plate | 8.61e-12 | 49 |
neural tube | 5.08e-11 | 52 |
neural rod | 5.08e-11 | 52 |
future spinal cord | 5.08e-11 | 52 |
neural keel | 5.08e-11 | 52 |
regional part of nervous system | 1.49e-10 | 54 |
neurectoderm | 1.18e-08 | 64 |
neural plate | 1.18e-08 | 64 |
presumptive neural plate | 1.18e-08 | 64 |
structure with developmental contribution from neural crest | 6.29e-08 | 92 |
ecto-epithelium | 2.18e-07 | 73 |
central nervous system | 2.18e-07 | 73 |
nervous system | 3.80e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.