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FFCP PHASE1:Mm9::chr2:90910459..90910503,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=68427|HGNC=|UniProt=|association_with_transcript=-4bp_to_ENSMUST00000123685_5end|description=CAGE_peak_2_at_Slc39a13_5end|id=chr2:90910459..90910503,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.66e-17!63;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0001017!1.44e-16!73;UBERON:0005743!1.44e-16!73;UBERON:0002616!4.28e-16!49;UBERON:0001049!7.62e-16!52;UBERON:0005068!7.62e-16!52;UBERON:0006241!7.62e-16!52;UBERON:0007135!7.62e-16!52;UBERON:0000073!1.04e-15!75;UBERON:0001016!1.04e-15!75;UBERON:0002346!1.10e-13!71;UBERON:0003075!1.10e-13!71;UBERON:0007284!1.10e-13!71;UBERON:0004121!1.71e-13!102;UBERON:0000924!1.71e-13!102;UBERON:0006601!1.71e-13!102;UBERON:0004111!4.48e-12!122;UBERON:0003056!4.07e-11!49;UBERON:0000025!7.17e-11!114;UBERON:0003080!8.76e-11!40;UBERON:0002780!3.11e-10!39;UBERON:0001890!3.11e-10!39;UBERON:0006240!3.11e-10!39;UBERON:0002020!4.46e-09!34;UBERON:0002791!3.24e-08!29;UBERON:0003528!3.24e-08!29;UBERON:0001893!3.24e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.63e-17,54;UBERON:0001017,1.42e-16,73;UBERON:0001049,7.52e-16,52;UBERON:0005068,7.52e-16,52;UBERON:0006241,7.52e-16,52;UBERON:0007135,7.52e-16,52;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.81e-15,47;UBERON:0006238,7.81e-15,47;UBERON:0002346,1.15e-14,64;UBERON:0003075,1.15e-14,64;UBERON:0007284,1.15e-14,64;UBERON:0002616,2.90e-14,46;UBERON:0004121,5.01e-14,95;UBERON:0000924,5.01e-14,95;UBERON:0006601,5.01e-14,95;UBERON:0010314,1.43e-13,92;UBERON:0010371,6.77e-13,73;UBERON:0004111,4.44e-12,122;UBERON:0003056,4.03e-11,49;UBERON:0000025,7.11e-11,114;UBERON:0003080,8.68e-11,40;UBERON:0002780,3.08e-10,39;UBERON:0001890,3.08e-10,39;UBERON:0006240,3.08e-10,39;UBERON:0002020,4.42e-09,34;UBERON:0003528,3.22e-08,29;UBERON:0002791,3.22e-08,29;UBERON:0001893,3.22e-08,29|phase1_expression=6.88640042550614,1.04692622291808,0.454999239389536,0.30246421130683,0,2.18243053485457,2.56973904655078,2.06597317506522,0.140788722151667,0.468129052643987,0.171217968225505,0.638177271962691,1.71200729931206,2.18551006047494,0.666219523631325,1.21485160433896,1.39912375625629,2.20823515750766,3.70208970735495,2.12194825899015,6.54833334163237,0.893618560807968,1.30599894569468,0.95995453676044,1.37645568640302,0.57423196411502,1.29228598847722,1.29282739611533,1.33016393619462,3.2763916868791,1.77384408524244,2.54012269383853,3.69038872550742,0,1.73310971850765,1.82858109894342,0.612508068787107,0.418531630736908,0,0.523523743973798,2.35292595212406,0.683045484958446,0.971020706062307,2.39203954153597,2.53442328048786,1.83546752161682,10.1710874765245,6.97680500417429,10.3252505885202,13.026803237977,5.87942970826523,2.87505128729943,1.34226084846189,2.17608642603403,0.672187598284928,1.02903774414379,3.15186783932632,2.06268836910977,4.85559506063035,6.87688273053643,6.97214543856797,5.76035704517525,8.00365316500025,5.84934816232909,4.94433181283487,6.3943210345149,5.09320187881288,9.98967593836042,3.7328260431052,4.59020190327748,2.3135745748652,4.28476476605705,3.53389665522582,3.30725157880376,3.06705507258356,4.5960939330501,13.2139057199266,11.7472351038373,9.83081812839958,5.67111037239834,6.77008562657831,4.16730696445408,12.0048689570594,9.00420176050688,9.32069311438542,8.54422897873636,5.55249555116501,4.28718725398191,2.57469057332826,1.88928900266964,2.6087803983151,3.44169550792555,1.3599426674155,2.15881276655127,3.24888208723835,5.37632264516803,6.17955448579708,2.38602451609281,3.63700406444016,2.82671659608272,2.81686839553361,2.56652954828636,2.54805239706646,28.4426681261332,1.5154372870785,1.77351905832569,2.02209778005913,3.53970027129086,4.14300613835475,5.64080128446334,2.60227990149204,1.21786191324856,2.99800146432876,2.41156224884196,4.58595957829249,4.14699751387929,1.97755974187499,9.25435884287435,3.5384422077995,5.82360659810673,5.07935492458905,2.90925151881133,3.72783522436244,23.4224637609238,22.6202443358531,1.53274233125155,0.718890747035522,0,1.65191295194984,10.4853447583376,7.32000964509802,5.27748278874031,5.73620256634512,7.41574826257959,13.9217989854905,9.24775199486219,2.54598409625791,4.22983700074316,9.60346482047964,7.15502310014011,1.56144531555244,1.83921683546778,3.42118046630164,3.61691562805716,6.05524842446818,4.22775276940004,5.80950692270319,10.0894314588216,4.74249584452253,2.26927296201383,4.75068035242662,2.84954452155847,1.66828349535359,2.78601733217733,1.85203922767149,1.99034266818493,0.702213187313235,2.57347907114715,2.27330799516474,3.10688658803253,2.11073453982987,2.88099298337624,2.3674473558521,4.32881309844288,2.00547246753592,5.11574678450897,4.02410102099429,4.32031766758527,5.26591519723137,3.77585167381919,6.08016071593918,6.14039947186396,3.07370161407471,6.44190810049784,9.2527577368216,5.9684675179985,1.32167513193519,1.32225283331772,2.77274725695804,2.78684006232526,1.80414445850931,1.81515172161008,1.111890219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|EntrezGene=68427
|HGNC=
|UniProt=
|association_with_transcript=-4bp_to_ENSMUST00000123685_5end
|description=CAGE_peak_2_at_Slc39a13_5end
|id=chr2:90910459..90910503,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.66e-17!63;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0001017!1.44e-16!73;UBERON:0005743!1.44e-16!73;UBERON:0002616!4.28e-16!49;UBERON:0001049!7.62e-16!52;UBERON:0005068!7.62e-16!52;UBERON:0006241!7.62e-16!52;UBERON:0007135!7.62e-16!52;UBERON:0000073!1.04e-15!75;UBERON:0001016!1.04e-15!75;UBERON:0002346!1.10e-13!71;UBERON:0003075!1.10e-13!71;UBERON:0007284!1.10e-13!71;UBERON:0004121!1.71e-13!102;UBERON:0000924!1.71e-13!102;UBERON:0006601!1.71e-13!102;UBERON:0004111!4.48e-12!122;UBERON:0003056!4.07e-11!49;UBERON:0000025!7.17e-11!114;UBERON:0003080!8.76e-11!40;UBERON:0002780!3.11e-10!39;UBERON:0001890!3.11e-10!39;UBERON:0006240!3.11e-10!39;UBERON:0002020!4.46e-09!34;UBERON:0002791!3.24e-08!29;UBERON:0003528!3.24e-08!29;UBERON:0001893!3.24e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.63e-17,54;UBERON:0001017,1.42e-16,73;UBERON:0001049,7.52e-16,52;UBERON:0005068,7.52e-16,52;UBERON:0006241,7.52e-16,52;UBERON:0007135,7.52e-16,52;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.81e-15,47;UBERON:0006238,7.81e-15,47;UBERON:0002346,1.15e-14,64;UBERON:0003075,1.15e-14,64;UBERON:0007284,1.15e-14,64;UBERON:0002616,2.90e-14,46;UBERON:0004121,5.01e-14,95;UBERON:0000924,5.01e-14,95;UBERON:0006601,5.01e-14,95;UBERON:0010314,1.43e-13,92;UBERON:0010371,6.77e-13,73;UBERON:0004111,4.44e-12,122;UBERON:0003056,4.03e-11,49;UBERON:0000025,7.11e-11,114;UBERON:0003080,8.68e-11,40;UBERON:0002780,3.08e-10,39;UBERON:0001890,3.08e-10,39;UBERON:0006240,3.08e-10,39;UBERON:0002020,4.42e-09,34;UBERON:0003528,3.22e-08,29;UBERON:0002791,3.22e-08,29;UBERON:0001893,3.22e-08,29
|phase1_expression=6.88640042550614,1.04692622291808,0.454999239389536,0.30246421130683,0,2.18243053485457,2.56973904655078,2.06597317506522,0.140788722151667,0.468129052643987,0.171217968225505,0.638177271962691,1.71200729931206,2.18551006047494,0.666219523631325,1.21485160433896,1.39912375625629,2.20823515750766,3.70208970735495,2.12194825899015,6.54833334163237,0.893618560807968,1.30599894569468,0.95995453676044,1.37645568640302,0.57423196411502,1.29228598847722,1.29282739611533,1.33016393619462,3.2763916868791,1.77384408524244,2.54012269383853,3.69038872550742,0,1.73310971850765,1.82858109894342,0.612508068787107,0.418531630736908,0,0.523523743973798,2.35292595212406,0.683045484958446,0.971020706062307,2.39203954153597,2.53442328048786,1.83546752161682,10.1710874765245,6.97680500417429,10.3252505885202,13.026803237977,5.87942970826523,2.87505128729943,1.34226084846189,2.17608642603403,0.672187598284928,1.02903774414379,3.15186783932632,2.06268836910977,4.85559506063035,6.87688273053643,6.97214543856797,5.76035704517525,8.00365316500025,5.84934816232909,4.94433181283487,6.3943210345149,5.09320187881288,9.98967593836042,3.7328260431052,4.59020190327748,2.3135745748652,4.28476476605705,3.53389665522582,3.30725157880376,3.06705507258356,4.5960939330501,13.2139057199266,11.7472351038373,9.83081812839958,5.67111037239834,6.77008562657831,4.16730696445408,12.0048689570594,9.00420176050688,9.32069311438542,8.54422897873636,5.55249555116501,4.28718725398191,2.57469057332826,1.88928900266964,2.6087803983151,3.44169550792555,1.3599426674155,2.15881276655127,3.24888208723835,5.37632264516803,6.17955448579708,2.38602451609281,3.63700406444016,2.82671659608272,2.81686839553361,2.56652954828636,2.54805239706646,28.4426681261332,1.5154372870785,1.77351905832569,2.02209778005913,3.53970027129086,4.14300613835475,5.64080128446334,2.60227990149204,1.21786191324856,2.99800146432876,2.41156224884196,4.58595957829249,4.14699751387929,1.97755974187499,9.25435884287435,3.5384422077995,5.82360659810673,5.07935492458905,2.90925151881133,3.72783522436244,23.4224637609238,22.6202443358531,1.53274233125155,0.718890747035522,0,1.65191295194984,10.4853447583376,7.32000964509802,5.27748278874031,5.73620256634512,7.41574826257959,13.9217989854905,9.24775199486219,2.54598409625791,4.22983700074316,9.60346482047964,7.15502310014011,1.56144531555244,1.83921683546778,3.42118046630164,3.61691562805716,6.05524842446818,4.22775276940004,5.80950692270319,10.0894314588216,4.74249584452253,2.26927296201383,4.75068035242662,2.84954452155847,1.66828349535359,2.78601733217733,1.85203922767149,1.99034266818493,0.702213187313235,2.57347907114715,2.27330799516474,3.10688658803253,2.11073453982987,2.88099298337624,2.3674473558521,4.32881309844288,2.00547246753592,5.11574678450897,4.02410102099429,4.32031766758527,5.26591519723137,3.77585167381919,6.08016071593918,6.14039947186396,3.07370161407471,6.44190810049784,9.2527577368216,5.9684675179985,1.32167513193519,1.32225283331772,2.77274725695804,2.78684006232526,1.80414445850931,1.81515172161008,1.11189021922435,0.760902504450237,2.84717436926707,1.4822905925161,2.5133520880027,3.38226002469956,2.14460495831032,2.69645822596266,1.51296634912286,1.39398891278057,2.46568271239006,1.71372768914593,4.50830942692322,2.24016460629846,3.49114476901726,3.92760591385784,5.31186911843761,7.52811754695971,6.27994911365499,8.63780147452604,2.07516838961004,1.33476084572875,1.17935397067922,1.34917267430912,2.43432145666204,1.4470629585145,1.52775511068852,2.5892652370573,3.08056930872567,4.11842119782122,4.31304619582064,4.83783231969054,4.05648975048929,6.06189307073068,5.56131981917928,4.82443521363367,7.57488079683079,1.51593129416388,2.11854469374634,1.69745085775188,2.58159273117352,4.18765643604539,3.33261097240419,2.53673742215138,3.15270288212382,2.43611158613652,5.26200736569707,5.07976275618788,4.48980952851328,5.06271705035291,3.01582567878545,2.71952841909355,4.42587845717133,3.03530420935206,16.215609588767,11.1351102262593,1.3114795630134,12.1186045058099,2.52406575533005,2.73307121007647,1.29254038639679,2.15071918157297,3.11918143715352,2.83076530788832,2.83367491172426,2.04579100537918,1.18586333383957,9.96096080907602,4.40014264145633,4.27357448801413,4.0721739838394,4.61916344323099,6.63725691699814,2.91336763385978,3.02323556964751,7.35559811048003,10.0402643579463,7.07100840271033,4.9101375701962,3.63533729477506,5.34746067577082,8.53299246426703,6.32511651449993,12.3762651897824,19.4050575279659,3.42116078659489,3.23396709456886,3.42939256050548,3.54680467284547,6.24290861607247,3.9491764944509,6.39376393140658,1.40803024838226,4.66030555900404,8.38007912608855,2.4732937941222,1.93757312035087,2.0506394475573,1.79058516004705,3.11867709515616,2.62332752966866,13.1651964427462,3.41741761595705,2.88941615148511,1.29636169158798,0.753473828018764,1.77702496037333,2.74533807847827,0.679913719975421,0.979660166265606,1.10559979043539,7.63736494412091,0.949007980743406,4.26970880966382,2.05210147561422,2.71814784818809,3.9305261474312,2.42755823492677,2.47960367176008,3.14107130380836,3.49960427887841,2.4853572523477,3.38215763210514,1.04661582230785,1.15820943319968,1.94451188344048,2.0665571756437,1.85851738039856,1.40828686374905,3.6457227756306,2.83120229949419,5.79801889982414,7.77681016896237,2.52808896502543,1.41907650703115,0.821687657318618,1.16928740680016,1.43221356533985,1.58945083825012,1.68273629327956,1.18151621739662,1.21159739937777,2.13379058634,1.31074040677893,1.36441033035653,0.962118416403295,1.5193997283604,4.76133805591944,2.44184548711471,1.43542170575161,2.01461539636894,7.72758376128762,2.81523713176773,2.74727436400898,1.92931541171159,8.02515366456581,11.2950368523413,5.06357760157895,3.43737308063638,5.499301834998,6.16574267793578,6.0431511791176,2.70009000092722,6.75481804836331,9.06284817968409,6.73088405277366,1.66059756134683,2.79317411380722,2.39027048055788,1.45864030240976,2.30574478890781,3.12533964365024,2.889207461421,5.76898160268904,4.81378814387723,3.03236654116557,4.56262739802432,3.2066478035633,4.30750934361459,3.71345883948242,4.07791829584854,3.81034953026459,4.51948871184936,2.31491064556446,2.47251540481984,3.53277408322554,4.80016953339582,2.30718548007139,3.33810665926249,2.61623549938191,4.04670335785922,3.46919892355874,3.29270351170991,3.15683653725411,3.53090695999241,3.92799590160417,3.2031454893527,3.44765688314472,4.91077251803627,2.94379998253335,3.85813221962283,4.49659040288303,3.50897412668113,2.57845264857958,4.97349663378993,3.97064554415128,4.40548887678801
|short_description=p2@Slc39a13
}}

Revision as of 00:50, 14 September 2013

Short description:p2@Slc39a13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc39a13_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_ENSMUST00000123685_5end
EntrezGene:Slc39a13
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Slc39a13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D92.57
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B223.42
cerebellum, neonate N30.CNhs11135.1395-42I222.62
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.93
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I17.53
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H18.64
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C216.22
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.63e-1754
central nervous system1.42e-1673
neural tube7.52e-1652
neural rod7.52e-1652
future spinal cord7.52e-1652
neural keel7.52e-1652
nervous system1.02e-1575
brain7.81e-1547
future brain7.81e-1547
neurectoderm1.15e-1464
neural plate1.15e-1464
presumptive neural plate1.15e-1464
regional part of brain2.90e-1446
ectoderm-derived structure5.01e-1495
ectoderm5.01e-1495
presumptive ectoderm5.01e-1495
structure with developmental contribution from neural crest1.43e-1392
ecto-epithelium6.77e-1373
anatomical conduit4.44e-12122
pre-chordal neural plate4.03e-1149
tube7.11e-11114
anterior neural tube8.68e-1140
regional part of forebrain3.08e-1039
forebrain3.08e-1039
future forebrain3.08e-1039
gray matter4.42e-0934
brain grey matter3.22e-0829
regional part of telencephalon3.22e-0829
telencephalon3.22e-0829







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