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FFCP PHASE1:Mm9::chr4:48598070..48598087,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=230157|HGNC=|MCL_coexpression_id=335|UniProt=Q6PFE7|association_with_transcript=5bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end|description=CAGE_peak_4_at_Tmeff1_5end|id=chr4:48598070..48598087,+|ontology_enrichment_celltype=CL:0000540!5.94e-15!33;CL:0000047!5.94e-15!33;CL:0000031!5.94e-15!33;CL:0000404!5.94e-15!33;CL:0000117!2.21e-12!23;CL:0000337!2.21e-12!23;CL:0000393!1.40e-11!39;CL:0000211!1.40e-11!39;CL:0002319!1.00e-10!43;CL:0000221!1.94e-10!44;CL:0000133!1.94e-10!44;CL:0000055!4.43e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.48e-19,33;CL:0000047,1.48e-19,33;CL:0000031,1.48e-19,33;CL:0000404,1.48e-19,33;CL:0000117,2.38e-18,23;CL:0000337,2.38e-18,23;CL:0000393,4.58e-15,39;CL:0000211,4.58e-15,39;CL:0002319,8.40e-13,43;CL:0000221,2.64e-12,44;CL:0000133,2.64e-12,44;CL:0002609,1.29e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.77e-18!71;UBERON:0003075!6.77e-18!71;UBERON:0007284!6.77e-18!71;UBERON:0001017!1.25e-17!73;UBERON:0005743!1.25e-17!73;UBERON:0000073!2.37e-17!75;UBERON:0001016!2.37e-17!75;UBERON:0004121!5.96e-17!102;UBERON:0000924!5.96e-17!102;UBERON:0006601!5.96e-17!102;UBERON:0003056!6.00e-14!49;UBERON:0001049!1.54e-13!52;UBERON:0005068!1.54e-13!52;UBERON:0006241!1.54e-13!52;UBERON:0007135!1.54e-13!52;UBERON:0000033!3.71e-13!63;UBERON:0000955!7.64e-11!50;UBERON:0006238!7.64e-11!50;UBERON:0002616!9.33e-11!49;UBERON:0003080!2.56e-10!40;UBERON:0002020!3.05e-10!34;UBERON:0002780!5.14e-10!39;UBERON:0001890!5.14e-10!39;UBERON:0006240!5.14e-10!39;UBERON:0002791!4.87e-08!29;UBERON:0003528!4.87e-08!29;UBERON:0001893!4.87e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.16e-20,64;UBERON:0003075,4.16e-20,64;UBERON:0007284,4.16e-20,64;UBERON:0001017,7.08e-17,73;UBERON:0004121,2.90e-16,95;UBERON:0000924,2.90e-16,95;UBERON:0006601,2.90e-16,95;UBERON:0001016,4.74e-16,75;UBERON:0010371,6.74e-16,73;UBERON:0001049,4.87e-14,52;UBERON:0005068,4.87e-14,52;UBERON:0006241,4.87e-14,52;UBERON:0007135,4.87e-14,52;UBERON:0003056,1.47e-13,49;UBERON:0000073,4.47e-13,54;UBERON:0010314,5.59e-12,92;UBERON:0002020,2.05e-11,34;UBERON:0002616,3.84e-10,46;UBERON:0000955,9.46e-10,47;UBERON:0006238,9.46e-10,47;UBERON:0003080,1.59e-09,40;UBERON:0002780,4.24e-09,39;UBERON:0001890,4.24e-09,39;UBERON:0006240,4.24e-09,39;UBERON:0002420,1.75e-08,8;UBERON:0007245,1.75e-08,8;UBERON:0010009,1.75e-08,8;UBERON:0010011,1.75e-08,8;UBERON:0000454,1.75e-08,8;UBERON:0003528,3.08e-08,29;UBERON:0002791,3.08e-08,29;UBERON:0001893,3.08e-08,29|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0,9.71119012126069,8.46385566835253,6.33831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,6.22137673850866,6.61529097825284,9.88527318351495,2.85650984403804,1.10434270475807,5.87955836231779,4.98396449294829,1.83843757322004,0,0.766124028511126,2.76491759861238,8.44072241473241,7.86793734980723,8.85552729946492,1.67509799400829,1.68828783009504,1.68078072554491,1.17851434189467,3.55929201997757,5.96478226640962,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0.346970653532272,1.82679286987285,0.230615497256059,1.3565037649736,0.823120949949934,0,0.494389935468748,0.289198713839823,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,1.83000241127451,6.03140890141749,0.869121600961382,1.53429274398198,1.87009240103604,2.10913641988085,0.305518091550949,0,0,0.420883711772948,2.34216797332867,5.9774547152703,3.78130472591233,2.71268672104287,2.4493139694478,1.7935920839879,1.96773621575431,0.517406741478031,3.44908788692548,2.26927296201383,0.703804496655795,1.09597866213787,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0.720248245844059,0,0.393528463494808,0.462801338662135,0,1.07309360559848,0.233530684734339,0.329119699826961,0,0,0,0,0,0.420579897128254,5.86556290561921,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,1.89667900953082,1.02823661348756,0,0.203651327845314,1.16371492300575,0.631222379012867,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,2.65287976478679,0.651859905768103,0.509235257325564,1.64283173801951,0.670025029767263,0.476087281772027,0.975668239288994,1.10344600874334,0.44292937929755,0.956728611944923,0.327726629431476,0.345369963731791,0.144649058581512,1.50791283939272,0,0,0,2.0871576698413,7.2671245687166,0.655739781506702,0,1.57754109708128,1.17131623288992,1.29254038639679,1.19484398976276,0.891194696329576,0.283076530788832,2.833674911724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|EntrezGene=230157
|HGNC=
|MCL_coexpression_id=335
|UniProt=Q6PFE7
|association_with_transcript=5bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end
|description=CAGE_peak_4_at_Tmeff1_5end
|id=chr4:48598070..48598087,+
|ontology_enrichment_celltype=CL:0000540!5.94e-15!33;CL:0000047!5.94e-15!33;CL:0000031!5.94e-15!33;CL:0000404!5.94e-15!33;CL:0000117!2.21e-12!23;CL:0000337!2.21e-12!23;CL:0000393!1.40e-11!39;CL:0000211!1.40e-11!39;CL:0002319!1.00e-10!43;CL:0000221!1.94e-10!44;CL:0000133!1.94e-10!44;CL:0000055!4.43e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.48e-19,33;CL:0000047,1.48e-19,33;CL:0000031,1.48e-19,33;CL:0000404,1.48e-19,33;CL:0000117,2.38e-18,23;CL:0000337,2.38e-18,23;CL:0000393,4.58e-15,39;CL:0000211,4.58e-15,39;CL:0002319,8.40e-13,43;CL:0000221,2.64e-12,44;CL:0000133,2.64e-12,44;CL:0002609,1.29e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.77e-18!71;UBERON:0003075!6.77e-18!71;UBERON:0007284!6.77e-18!71;UBERON:0001017!1.25e-17!73;UBERON:0005743!1.25e-17!73;UBERON:0000073!2.37e-17!75;UBERON:0001016!2.37e-17!75;UBERON:0004121!5.96e-17!102;UBERON:0000924!5.96e-17!102;UBERON:0006601!5.96e-17!102;UBERON:0003056!6.00e-14!49;UBERON:0001049!1.54e-13!52;UBERON:0005068!1.54e-13!52;UBERON:0006241!1.54e-13!52;UBERON:0007135!1.54e-13!52;UBERON:0000033!3.71e-13!63;UBERON:0000955!7.64e-11!50;UBERON:0006238!7.64e-11!50;UBERON:0002616!9.33e-11!49;UBERON:0003080!2.56e-10!40;UBERON:0002020!3.05e-10!34;UBERON:0002780!5.14e-10!39;UBERON:0001890!5.14e-10!39;UBERON:0006240!5.14e-10!39;UBERON:0002791!4.87e-08!29;UBERON:0003528!4.87e-08!29;UBERON:0001893!4.87e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.16e-20,64;UBERON:0003075,4.16e-20,64;UBERON:0007284,4.16e-20,64;UBERON:0001017,7.08e-17,73;UBERON:0004121,2.90e-16,95;UBERON:0000924,2.90e-16,95;UBERON:0006601,2.90e-16,95;UBERON:0001016,4.74e-16,75;UBERON:0010371,6.74e-16,73;UBERON:0001049,4.87e-14,52;UBERON:0005068,4.87e-14,52;UBERON:0006241,4.87e-14,52;UBERON:0007135,4.87e-14,52;UBERON:0003056,1.47e-13,49;UBERON:0000073,4.47e-13,54;UBERON:0010314,5.59e-12,92;UBERON:0002020,2.05e-11,34;UBERON:0002616,3.84e-10,46;UBERON:0000955,9.46e-10,47;UBERON:0006238,9.46e-10,47;UBERON:0003080,1.59e-09,40;UBERON:0002780,4.24e-09,39;UBERON:0001890,4.24e-09,39;UBERON:0006240,4.24e-09,39;UBERON:0002420,1.75e-08,8;UBERON:0007245,1.75e-08,8;UBERON:0010009,1.75e-08,8;UBERON:0010011,1.75e-08,8;UBERON:0000454,1.75e-08,8;UBERON:0003528,3.08e-08,29;UBERON:0002791,3.08e-08,29;UBERON:0001893,3.08e-08,29
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0,9.71119012126069,8.46385566835253,6.33831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,6.22137673850866,6.61529097825284,9.88527318351495,2.85650984403804,1.10434270475807,5.87955836231779,4.98396449294829,1.83843757322004,0,0.766124028511126,2.76491759861238,8.44072241473241,7.86793734980723,8.85552729946492,1.67509799400829,1.68828783009504,1.68078072554491,1.17851434189467,3.55929201997757,5.96478226640962,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0.346970653532272,1.82679286987285,0.230615497256059,1.3565037649736,0.823120949949934,0,0.494389935468748,0.289198713839823,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,1.83000241127451,6.03140890141749,0.869121600961382,1.53429274398198,1.87009240103604,2.10913641988085,0.305518091550949,0,0,0.420883711772948,2.34216797332867,5.9774547152703,3.78130472591233,2.71268672104287,2.4493139694478,1.7935920839879,1.96773621575431,0.517406741478031,3.44908788692548,2.26927296201383,0.703804496655795,1.09597866213787,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0.720248245844059,0,0.393528463494808,0.462801338662135,0,1.07309360559848,0.233530684734339,0.329119699826961,0,0,0,0,0,0.420579897128254,5.86556290561921,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,1.89667900953082,1.02823661348756,0,0.203651327845314,1.16371492300575,0.631222379012867,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,2.65287976478679,0.651859905768103,0.509235257325564,1.64283173801951,0.670025029767263,0.476087281772027,0.975668239288994,1.10344600874334,0.44292937929755,0.956728611944923,0.327726629431476,0.345369963731791,0.144649058581512,1.50791283939272,0,0,0,2.0871576698413,7.2671245687166,0.655739781506702,0,1.57754109708128,1.17131623288992,1.29254038639679,1.19484398976276,0.891194696329576,0.283076530788832,2.83367491172426,1.75353514746787,1.18586333383957,0.642642632843614,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.728341908464944,0.906970670894253,0,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0,0,0,0,3.24109969256358,2.32845630808958,1.28602221018955,0.532020700926821,0.713475270408282,0.658196082408484,0.913394847343798,0.23467170806371,2.54198485036584,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,4.07935664423121,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,2.37251995185852,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,9.58277995763124,2.24274819065968,1.48912641411388,0.388902376688095,1.29159823477731,0.337912250981556,0.821500670520278,1.69265700297135,0.629156066554265,0.483168241652012,12.6733202753461,0,0.608175645870493,0.616265742988964,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0,0,0,0,0,1.99787358036658,0.897138566094757,1.34307693091263,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0,0.453142408984205,1.03552062350364,3.42498247027783,1.99512436700516,3.24393850932855,1.21553358534147,1.67690530102386,1.2869045591501,1.77797382241292,0.412070114477788,0.962757628775446,0.505394423527595,0,0.943131706930381,0.749132059759059,0.704276676453562,1.26358031702349,1.42888107384922,0.695305955669133,1.15745532278223,0.412085900803307,0.588795680537589,0,0.70990322463735,1.1921809497366,0.436039249896986,0.941093804153306,0.423073039458382,1.09756783723664,0.263069711437843,0.271608227691724,0,1.42362021749009,1.37906275325789,0.818462086339379,1.08455788830176,1.15743966588685,1.74867404556562,0.701794825336225,0.644613162144895,0.382576664137687,0,0.695603506861264
|short_description=p4@Tmeff1
}}

Revision as of 05:10, 14 September 2013

Short description:p4@Tmeff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tmeff1_5end
Coexpression cluster:MCL_coexpression_mm9:335
Association with transcript: 5bp_to_ENSMUST00000107703, NM_021436, uc008svk.1, uc008svl.1_5end
EntrezGene:Tmeff1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Tmeff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.16e-2064
neural plate4.16e-2064
presumptive neural plate4.16e-2064
central nervous system7.08e-1773
ectoderm-derived structure2.90e-1695
ectoderm2.90e-1695
presumptive ectoderm2.90e-1695
nervous system4.74e-1675
ecto-epithelium6.74e-1673
neural tube4.87e-1452
neural rod4.87e-1452
future spinal cord4.87e-1452
neural keel4.87e-1452
pre-chordal neural plate1.47e-1349
regional part of nervous system4.47e-1354
structure with developmental contribution from neural crest5.59e-1292
gray matter2.05e-1134
regional part of brain3.84e-1046
brain9.46e-1047
future brain9.46e-1047
anterior neural tube1.59e-0940
regional part of forebrain4.24e-0939
forebrain4.24e-0939
future forebrain4.24e-0939
basal ganglion1.75e-088
nuclear complex of neuraxis1.75e-088
aggregate regional part of brain1.75e-088
collection of basal ganglia1.75e-088
cerebral subcortex1.75e-088
brain grey matter3.08e-0829
regional part of telencephalon3.08e-0829
telencephalon3.08e-0829







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