FFCP PHASE1:Hg19::chr9:113801375..113801388,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3166|TSSclassifier=W|UniProt=|association_with_transcript=137bp_to_uc010mub.2_5end|description=CAGE_peak_25_at_LPAR1_5end|id=chr9:113801375..113801388,-|ontology_enrichment_celltype=CL:0002009!4.98e-15!65;CL:0002057!5.81e-14!42;CL:0002194!7.74e-14!63;CL:0000576!7.74e-14!63;CL:0000040!7.74e-14!63;CL:0000559!7.74e-14!63;CL:0000557!2.58e-12!71;CL:0000860!3.73e-12!45;CL:0000839!7.28e-11!70;CL:0000766!2.58e-10!76;CL:0000990!1.47e-08!8;CL:0000048!2.68e-07!430|ontology_enrichment_celltype_v019=CL:0000860;8.00e-18;33!CL:0002057;8.00e-18;33!CL:0000990;6.38e-17;8!CL:0000576;8.27e-15;48!CL:0000453;1.00e-14;5!CL:0000451;1.01e-13;10!CL:0000473;3.35e-12;39!CL:0000234;3.35e-12;39!CL:0002598;4.50e-09;2!CL:0000766;1.04e-08;69!CL:0000840;8.99e-07;5|ontology_enrichment_celltype_v019_2=CL:0002009,5.03e-22,61;CL:0000860,1.62e-21,42;CL:0002057,1.62e-21,42;CL:0002194,2.03e-20,59;CL:0000576,2.03e-20,59;CL:0000040,2.03e-20,59;CL:0000559,2.03e-20,59;CL:0000557,1.18e-19,67;CL:0000473,2.35e-18,48;CL:0000234,2.35e-18,48;CL:0000766,5.99e-18,72;CL:0000839,8.28e-18,66;CL:0000990,5.03e-17,8;CL:0000763,1.97e-16,108;CL:0000049,1.97e-16,108;CL:0000453,9.79e-15,5;CL:0000738,1.85e-14,136;CL:0000451,8.32e-14,10;CL:0002031,2.55e-11,120;CL:0002032,2.74e-11,161;CL:0000837,2.74e-11,161;CL:0002087,1.02e-10,115;CL:0000037,1.42e-10,168;CL:0000988,9.74e-10,177;CL:0002598,7.71e-09,2;CL:0000048,1.52e-07,427;CL:0000723,2.56e-07,433;CL:0000134,3.97e-07,354;CL:0000034,5.02e-07,441;CL:0002320,7.70e-07,361;CL:0000840,7.77e-07,5;CL:0001029,7.77e-07,5|ontology_enrichment_development_v019=CL:0002057;2.04e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.65e-09;2|ontology_enrichment_disease_v019_2=DOID:3307,8.39e-10,2|ontology_enrichment_uberon=UBERON:0002204!3.65e-17!167;UBERON:0004765!2.30e-15!101;UBERON:0001434!2.30e-15!101;UBERON:0002371!3.66e-12!80;UBERON:0001474!2.71e-11!86;UBERON:0002390!3.03e-11!102;UBERON:0003061!3.03e-11!102;UBERON:0002193!2.89e-09!112;UBERON:0000062!1.36e-08!511;UBERON:0000468!6.56e-08!659;UBERON:0000467!1.20e-07!625;UBERON:0000480!1.55e-07!626;UBERON:0002405!2.86e-07!115;UBERON:0002050!9.12e-07!605;UBERON:0005423!9.12e-07!605;UBERON:0000479!9.25e-07!787|ontology_enrichment_uberon_v019=UBERON:0005162;4.50e-09;2!UBERON:0000122;4.50e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.57e-17,76;UBERON:0001474,3.10e-15,82;UBERON:0001434,1.52e-14,100;UBERON:0002405,1.76e-14,93;UBERON:0004765,1.76e-13,90;UBERON:0002390,2.01e-13,98;UBERON:0003061,2.01e-13,98;UBERON:0002193,3.79e-13,108;UBERON:0002204,1.56e-11,167;UBERON:0005162,2.43e-09,2;UBERON:0000122,2.43e-09,2|phase1_expression=0.726713517082227,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,1.14620108621927,1.47781061009902,0.550975469195755,1.57345710739562,0.383829398097213,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,4.25439401055856,0.647787332037959,0.77272670290256,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,2.78735733805593,0.575384784644301,0.256160706529101,6.62150243688039,0.689491361473237,0,1.35426486594342,0.188242339542605,0,2.24723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0,1.19678194572979,2.98357325372886,0.290209238628584,0,1.24564449799115,0.251248665256743,0.521482918420201,4.34377689410233,0,0.368277635987565,4.1140110367315,1.05627643155971,0.212604299965044,1.04829322754188,1.12328631146495,1.50176892841506,1.12507910687956,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0.221729397462564,0,0.196468613246569,0,0.370784442784429,1.29818957461873,1.39303789839414,0.797747763113191,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0,0.468642863667593,0,0,0.448346041655403,0,0,0.421352420106746,0.204154171254893,0.61417158655884,0.516628905878827,0,1.48360157567134,1.82032272387605,0,0.336672227908132,0.750711119231785,1.10825646193673,1.31693286264251,0.30648779579902,0.901428353439581,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.721367704669072,0.257640540045629,0.744467425326359,0.168776332241266,0.487185025805993,0,0.460249493211497,0.323292113637624,0,0,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0,3.576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=137bp_to_uc010mub.2_5end | |||
|description=CAGE_peak_25_at_LPAR1_5end | |||
|id=chr9:113801375..113801388,- | |||
|ontology_enrichment_celltype=CL:0002009!4.98e-15!65;CL:0002057!5.81e-14!42;CL:0002194!7.74e-14!63;CL:0000576!7.74e-14!63;CL:0000040!7.74e-14!63;CL:0000559!7.74e-14!63;CL:0000557!2.58e-12!71;CL:0000860!3.73e-12!45;CL:0000839!7.28e-11!70;CL:0000766!2.58e-10!76;CL:0000990!1.47e-08!8;CL:0000048!2.68e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.00e-18;33!CL:0002057;8.00e-18;33!CL:0000990;6.38e-17;8!CL:0000576;8.27e-15;48!CL:0000453;1.00e-14;5!CL:0000451;1.01e-13;10!CL:0000473;3.35e-12;39!CL:0000234;3.35e-12;39!CL:0002598;4.50e-09;2!CL:0000766;1.04e-08;69!CL:0000840;8.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.03e-22,61;CL:0000860,1.62e-21,42;CL:0002057,1.62e-21,42;CL:0002194,2.03e-20,59;CL:0000576,2.03e-20,59;CL:0000040,2.03e-20,59;CL:0000559,2.03e-20,59;CL:0000557,1.18e-19,67;CL:0000473,2.35e-18,48;CL:0000234,2.35e-18,48;CL:0000766,5.99e-18,72;CL:0000839,8.28e-18,66;CL:0000990,5.03e-17,8;CL:0000763,1.97e-16,108;CL:0000049,1.97e-16,108;CL:0000453,9.79e-15,5;CL:0000738,1.85e-14,136;CL:0000451,8.32e-14,10;CL:0002031,2.55e-11,120;CL:0002032,2.74e-11,161;CL:0000837,2.74e-11,161;CL:0002087,1.02e-10,115;CL:0000037,1.42e-10,168;CL:0000988,9.74e-10,177;CL:0002598,7.71e-09,2;CL:0000048,1.52e-07,427;CL:0000723,2.56e-07,433;CL:0000134,3.97e-07,354;CL:0000034,5.02e-07,441;CL:0002320,7.70e-07,361;CL:0000840,7.77e-07,5;CL:0001029,7.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.65e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.39e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.65e-17!167;UBERON:0004765!2.30e-15!101;UBERON:0001434!2.30e-15!101;UBERON:0002371!3.66e-12!80;UBERON:0001474!2.71e-11!86;UBERON:0002390!3.03e-11!102;UBERON:0003061!3.03e-11!102;UBERON:0002193!2.89e-09!112;UBERON:0000062!1.36e-08!511;UBERON:0000468!6.56e-08!659;UBERON:0000467!1.20e-07!625;UBERON:0000480!1.55e-07!626;UBERON:0002405!2.86e-07!115;UBERON:0002050!9.12e-07!605;UBERON:0005423!9.12e-07!605;UBERON:0000479!9.25e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;4.50e-09;2!UBERON:0000122;4.50e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.57e-17,76;UBERON:0001474,3.10e-15,82;UBERON:0001434,1.52e-14,100;UBERON:0002405,1.76e-14,93;UBERON:0004765,1.76e-13,90;UBERON:0002390,2.01e-13,98;UBERON:0003061,2.01e-13,98;UBERON:0002193,3.79e-13,108;UBERON:0002204,1.56e-11,167;UBERON:0005162,2.43e-09,2;UBERON:0000122,2.43e-09,2 | |||
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| |||
|short_description=p25@LPAR1 | |||
}} |
Revision as of 06:57, 14 September 2013
Short description: | p25@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 137bp_to_uc010mub.2_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.57e-17 | 76 |
bone element | 3.10e-15 | 82 |
skeletal system | 1.52e-14 | 100 |
immune system | 1.76e-14 | 93 |
skeletal element | 1.76e-13 | 90 |
hematopoietic system | 2.01e-13 | 98 |
blood island | 2.01e-13 | 98 |
hemolymphoid system | 3.79e-13 | 108 |
musculoskeletal system | 1.56e-11 | 167 |
multi cell component structure | 2.43e-09 | 2 |
neuron projection bundle | 2.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.39e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.