FFCP PHASE1:Mm9::chr5:5514877..5514891,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64945|HGNC=|MCL_coexpression_id=3342|UniProt=Q9ET43|association_with_transcript=-4bp_to_ENSMUST00000060947_5end|description=CAGE_peak_2_at_Cldn12_5end|id=chr5:5514877..5514891,-|ontology_enrichment_celltype=CL:0000055!3.70e-11!50;CL:0002321!3.91e-10!70;CL:0000220!3.91e-10!70;CL:0000221!4.73e-09!44;CL:0000133!4.73e-09!44;CL:0002319!9.49e-09!43;CL:0000393!5.30e-08!39;CL:0000211!5.30e-08!39|ontology_enrichment_celltype_v019_2=CL:0002321,4.29e-11,70;CL:0000221,1.27e-09,44;CL:0000133,1.27e-09,44;CL:0002319,2.62e-09,43;CL:0000393,2.23e-08,39;CL:0000211,2.23e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!9.40e-14!122;UBERON:0004121!1.13e-13!102;UBERON:0000924!1.13e-13!102;UBERON:0006601!1.13e-13!102;UBERON:0000025!1.43e-13!114;UBERON:0000073!8.05e-13!75;UBERON:0001016!8.05e-13!75;UBERON:0001017!1.89e-12!73;UBERON:0005743!1.89e-12!73;UBERON:0000033!6.18e-11!63;UBERON:0003056!9.21e-09!49;UBERON:0000955!1.05e-08!50;UBERON:0006238!1.05e-08!50;UBERON:0003914!1.27e-08!47;UBERON:0002346!1.31e-08!71;UBERON:0003075!1.31e-08!71;UBERON:0007284!1.31e-08!71;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0002616!3.05e-08!49;UBERON:0009854!1.87e-07!23;UBERON:0009856!1.87e-07!23;UBERON:0002365!2.16e-07!25;UBERON:0002330!2.16e-07!25;UBERON:0001049!3.35e-07!52;UBERON:0005068!3.35e-07!52;UBERON:0006241!3.35e-07!52;UBERON:0007135!3.35e-07!52;UBERON:0003080!5.46e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.62e-15,95;UBERON:0000924,3.62e-15,95;UBERON:0006601,3.62e-15,95;UBERON:0004111,3.60e-13,122;UBERON:0001016,4.75e-13,75;UBERON:0000025,5.69e-13,114;UBERON:0001017,1.15e-12,73;UBERON:0002346,4.08e-10,64;UBERON:0003075,4.08e-10,64;UBERON:0007284,4.08e-10,64;UBERON:0010314,5.51e-10,92;UBERON:0010371,1.06e-09,73;UBERON:0003914,1.29e-08,47;UBERON:0003056,1.42e-08,49;UBERON:0002107,1.51e-08,22;UBERON:0007499,1.51e-08,22;UBERON:0006925,1.51e-08,22;UBERON:0009497,1.51e-08,22;UBERON:0000015,1.51e-08,22;UBERON:0002423,1.51e-08,22;UBERON:0006235,1.51e-08,22;UBERON:0008835,1.51e-08,22;UBERON:0003894,1.51e-08,22;UBERON:0004161,1.51e-08,22;UBERON:0008836,1.51e-08,22;UBERON:0000955,4.32e-08,47;UBERON:0006238,4.32e-08,47;UBERON:0000073,1.07e-07,54;UBERON:0009854,1.16e-07,23;UBERON:0009856,1.16e-07,23;UBERON:0002616,1.26e-07,46;UBERON:0002365,2.02e-07,25;UBERON:0002330,2.02e-07,25;UBERON:0001049,2.90e-07,52;UBERON:0005068,2.90e-07,52;UBERON:0006241,2.90e-07,52;UBERON:0007135,2.90e-07,52;UBERON:0003080,9.22e-07,40|phase1_expression=1.92178616525753,2.44282785347553,1.36499771816861,1.51232105653415,0.500895729946347,2.85394762250213,0.700837921786577,0,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,2.46625541438102,0.0992909512008853,0,1.27993938234725,0.91763712426868,1.14846392823004,3.01533397311352,0.861884930743556,1.71021077510736,0.756090389279792,2.21730510655305,0.635030673459631,1.84519436275371,0,2.3108129580102,2.65975432573588,2.45003227514843,0,0,0,0,0,0,2.26614272356039,3.04130793658544,4.03802854755699,0,15.9158364157726,7.0299578475031,8.74934545834275,6.99932108126813,7.18762821824858,0,0,0,3.8588915405392,2.0057340795713,5.15672092277442,1.82084814773638,1.05798195854407,1.90149421051854,2.71075625655306,0.889294796111139,0.449949858640699,0,0,2.09720077362883,3.07374644257244,3.62913643079672,2.02508907497536,5.04779907243317,1.99955689082663,1.76694832761291,1.95985278743926,2.20444583341944,1.83843757322004,1.10115880999389,4.46905683298157,4.30098293117482,2.90149833006426,2.65314166446988,4.16730696445408,3.90856198601933,2.25105044012672,3.36156145108982,0,1.56608848879013,1.86399445825301,4.01348824665875,1.5870027622425,2.31891590961342,6.88339101585109,8.15965600449301,9.17495425784289,9.74664626171504,18.8171292580881,3.65155492342555,0.852151612890289,0.779358013808606,0.35333957451034,2.95771181531029,0,0,0,1.5154372870785,1.77351905832569,0,5.59501010623394,1.03575153458869,1.48442139064825,0.867426633830679,1.21786191324856,0.922461989024234,1.3565037649736,0.587943535678524,2.13633205260448,3.21353458054686,1.87979163995885,0.884610551949874,1.13236794963186,0.883366073841574,0.969750506270444,0,2.92780797011547,3.97948742945565,2.04365644166873,0.359445373517761,0,0.254140454146129,2.99581278809645,1.83000241127451,1.00523481690292,2.60736480288415,2.04572365864264,3.53239675751252,4.54275536589721,1.62942982160506,1.11966273549084,1.51633655060205,3.78795340595653,2.47228841629137,2.75882525320168,3.06105620669094,2.41127708537144,2.24520447199382,1.7935920839879,1.49922759295566,4.9153640440413,0.646703978798527,1.89106080167819,1.23165786914764,1.31517439456545,1.39023624612799,0.348252166522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| ||
|EntrezGene=64945 | |||
|HGNC= | |||
|MCL_coexpression_id=3342 | |||
|UniProt=Q9ET43 | |||
|association_with_transcript=-4bp_to_ENSMUST00000060947_5end | |||
|description=CAGE_peak_2_at_Cldn12_5end | |||
|id=chr5:5514877..5514891,- | |||
|ontology_enrichment_celltype=CL:0000055!3.70e-11!50;CL:0002321!3.91e-10!70;CL:0000220!3.91e-10!70;CL:0000221!4.73e-09!44;CL:0000133!4.73e-09!44;CL:0002319!9.49e-09!43;CL:0000393!5.30e-08!39;CL:0000211!5.30e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.29e-11,70;CL:0000221,1.27e-09,44;CL:0000133,1.27e-09,44;CL:0002319,2.62e-09,43;CL:0000393,2.23e-08,39;CL:0000211,2.23e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.40e-14!122;UBERON:0004121!1.13e-13!102;UBERON:0000924!1.13e-13!102;UBERON:0006601!1.13e-13!102;UBERON:0000025!1.43e-13!114;UBERON:0000073!8.05e-13!75;UBERON:0001016!8.05e-13!75;UBERON:0001017!1.89e-12!73;UBERON:0005743!1.89e-12!73;UBERON:0000033!6.18e-11!63;UBERON:0003056!9.21e-09!49;UBERON:0000955!1.05e-08!50;UBERON:0006238!1.05e-08!50;UBERON:0003914!1.27e-08!47;UBERON:0002346!1.31e-08!71;UBERON:0003075!1.31e-08!71;UBERON:0007284!1.31e-08!71;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0002616!3.05e-08!49;UBERON:0009854!1.87e-07!23;UBERON:0009856!1.87e-07!23;UBERON:0002365!2.16e-07!25;UBERON:0002330!2.16e-07!25;UBERON:0001049!3.35e-07!52;UBERON:0005068!3.35e-07!52;UBERON:0006241!3.35e-07!52;UBERON:0007135!3.35e-07!52;UBERON:0003080!5.46e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.62e-15,95;UBERON:0000924,3.62e-15,95;UBERON:0006601,3.62e-15,95;UBERON:0004111,3.60e-13,122;UBERON:0001016,4.75e-13,75;UBERON:0000025,5.69e-13,114;UBERON:0001017,1.15e-12,73;UBERON:0002346,4.08e-10,64;UBERON:0003075,4.08e-10,64;UBERON:0007284,4.08e-10,64;UBERON:0010314,5.51e-10,92;UBERON:0010371,1.06e-09,73;UBERON:0003914,1.29e-08,47;UBERON:0003056,1.42e-08,49;UBERON:0002107,1.51e-08,22;UBERON:0007499,1.51e-08,22;UBERON:0006925,1.51e-08,22;UBERON:0009497,1.51e-08,22;UBERON:0000015,1.51e-08,22;UBERON:0002423,1.51e-08,22;UBERON:0006235,1.51e-08,22;UBERON:0008835,1.51e-08,22;UBERON:0003894,1.51e-08,22;UBERON:0004161,1.51e-08,22;UBERON:0008836,1.51e-08,22;UBERON:0000955,4.32e-08,47;UBERON:0006238,4.32e-08,47;UBERON:0000073,1.07e-07,54;UBERON:0009854,1.16e-07,23;UBERON:0009856,1.16e-07,23;UBERON:0002616,1.26e-07,46;UBERON:0002365,2.02e-07,25;UBERON:0002330,2.02e-07,25;UBERON:0001049,2.90e-07,52;UBERON:0005068,2.90e-07,52;UBERON:0006241,2.90e-07,52;UBERON:0007135,2.90e-07,52;UBERON:0003080,9.22e-07,40 | |||
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| |||
|short_description=p2@Cldn12 | |||
}} |
Revision as of 07:47, 14 September 2013
Short description: | p2@Cldn12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cldn12_5end |
Coexpression cluster: | MCL_coexpression_mm9:3342 |
Association with transcript: | -4bp_to_ENSMUST00000060947_5end |
EntrezGene: | Cldn12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.29e-11 | 70 |
ectodermal cell | 1.27e-09 | 44 |
neurectodermal cell | 1.27e-09 | 44 |
neural cell | 2.62e-09 | 43 |
electrically responsive cell | 2.23e-08 | 39 |
electrically active cell | 2.23e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.