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FFCP PHASE1:Mm9::chr6:108610428..108610440,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20893|HGNC=|MCL_coexpression_id=34|UniProt=O35185,Q542A5|association_with_transcript=-182bp_to_ENSMUST00000032194,NM_011498,uc009ddn.1_5end|description=CAGE_peak_4_at_Bhlhe40_5end|id=chr6:108610428..108610440,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.75e-07!50;UBERON:0006238!1.75e-07!50;UBERON:0002616!4.78e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.39e-14,47;UBERON:0006238,2.39e-14,47;UBERON:0000073,3.78e-14,54;UBERON:0002616,2.34e-13,46;UBERON:0001049,3.56e-12,52;UBERON:0005068,3.56e-12,52;UBERON:0006241,3.56e-12,52;UBERON:0007135,3.56e-12,52;UBERON:0001017,4.07e-12,73;UBERON:0001016,1.45e-11,75;UBERON:0002021,8.34e-11,10;UBERON:0000411,8.34e-11,10;UBERON:0001950,8.34e-11,10;UBERON:0003080,1.73e-10,40;UBERON:0002780,1.25e-09,39;UBERON:0001890,1.25e-09,39;UBERON:0006240,1.25e-09,39;UBERON:0002346,1.99e-09,64;UBERON:0003075,1.99e-09,64;UBERON:0007284,1.99e-09,64;UBERON:0004121,9.38e-09,95;UBERON:0000924,9.38e-09,95;UBERON:0006601,9.38e-09,95;UBERON:0003056,1.96e-08,49;UBERON:0010371,2.01e-07,73|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,2.58246646883153,2.67498572088167,4.44722600011788,0.68487187290202,0.797721589953364,0,0.34968160967599,0.333109761815663,0,0,0.473193248037357,0.685572168028694,0.42438965179803,0.595303031057488,0.496454756004426,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,1.0470474879476,2.35292595212406,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.436050312760893,0.439372365468944,0,0.139986421625363,0,2.34895648480831,5.07753499407941,2.01656279485478,0.257259436035947,0,1.54701627683233,0.202316460859598,0,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,4.40463523997555,2.29837208553338,3.07213066512487,0.659431438650969,0.457438218012048,0.52091337055676,2.23346399201105,0.56276261003168,1.68078072554491,0.883885756421003,0.284743361598206,0.559198337475902,0.37863096666592,0.453429360640713,7.8263411949453,0,4.75979933595425,0.539703191637817,0,0.896053774194671,0.280888840263504,0.340860645156116,0,0.35333957451034,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0,0.34255163915718,0.776813650941515,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0,0.578397427679647,0,0.485300549842228,1.10420759230197,0,0,4.9772735491963,2.51336048176146,0,12.9400334466394,7.7987355029143,5.08280908292259,2.39665023047716,2.28750301409313,0.125654352112864,1.91206752211504,1.02286182932132,3.1168206683934,1.46017136760982,0.509196819251581,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.30140963567143,0.408218994907967,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,2.1066395619397,3.08817488537658,2.27330799516474,0.414251545071004,0,0.540186184383045,0,0.590292695242212,0.308534225774757,0.930135779001631,0.268273401399619,0.350296027101508,1.31647879930784,0.492502392237286,0.405344047729279,0.438599962275997,0.658650345873152,0.134206418760372,1.26173969138476,0.308713837137853,0.991256348951394,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,0.251335208800269,0.198956472041151,0.779856348476481,0,0,0.398282546508734,0.569003702859245,0.456994050438915,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,1.32849133181642,0.470996183524124,0.616985819609003,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0,0.324270453550071,0,4.31304619582064,0.744281895337007,0,0.252578877947112,0,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,2.72936002979246,2.10981035865966,0.163934945376675,2.01976741763498,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0.395287777946524,2.89189184779626,0.567760340833074,0.178065603667255,0.488660878060728,0.659880491890142,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0.532020700926821,1.07021290561242,1.31639216481697,3.95804433848979,0.469343416127421,0.847328283455281,0,0.49465875882444,0.322928853391811,0.72375509913787,0.238744688006273,0.328281799490123,0.582961673259701,2.22510362412612,0.341741761595705,0.206386867963223,0,0.565105371014073,0.546776910884101,0,19.2075625893056,22.112329467138,12.9907975376158,0,0.316335993581135,0,0,0.627264888043406,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.704143431874524,0.5208175393758,0.838874755405687,0.483168241652012,0.288030006257865,0,1.01362607645082,0.410843828659309,0.51968329191118,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0,1.36038230169127,0.887943813496259,0.807424709485281,0.839423081820392,0.386379188064381,0.187682475451182,0.549454872801795,1.07184189539533,0,2.25900737046827,1.84130094602871,0.572895513439397,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,3.60256962579376,3.62513927187364,2.5888015587591,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.618105171716683,0,0.252697211763798,1.01391719956096,0.943131706930381,0.37456602987953,0.512201219238954,0.746661096422973,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0,0.872078499793971,0.752875043322645,0.761531471025089,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.593175090620871,0.197008964751127,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843|short_description=p4@Bhlhe40}}
|EntrezGene=20893
|HGNC=
|MCL_coexpression_id=34
|UniProt=O35185,Q542A5
|association_with_transcript=-182bp_to_ENSMUST00000032194,NM_011498,uc009ddn.1_5end
|description=CAGE_peak_4_at_Bhlhe40_5end
|id=chr6:108610428..108610440,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.75e-07!50;UBERON:0006238!1.75e-07!50;UBERON:0002616!4.78e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.39e-14,47;UBERON:0006238,2.39e-14,47;UBERON:0000073,3.78e-14,54;UBERON:0002616,2.34e-13,46;UBERON:0001049,3.56e-12,52;UBERON:0005068,3.56e-12,52;UBERON:0006241,3.56e-12,52;UBERON:0007135,3.56e-12,52;UBERON:0001017,4.07e-12,73;UBERON:0001016,1.45e-11,75;UBERON:0002021,8.34e-11,10;UBERON:0000411,8.34e-11,10;UBERON:0001950,8.34e-11,10;UBERON:0003080,1.73e-10,40;UBERON:0002780,1.25e-09,39;UBERON:0001890,1.25e-09,39;UBERON:0006240,1.25e-09,39;UBERON:0002346,1.99e-09,64;UBERON:0003075,1.99e-09,64;UBERON:0007284,1.99e-09,64;UBERON:0004121,9.38e-09,95;UBERON:0000924,9.38e-09,95;UBERON:0006601,9.38e-09,95;UBERON:0003056,1.96e-08,49;UBERON:0010371,2.01e-07,73
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,2.58246646883153,2.67498572088167,4.44722600011788,0.68487187290202,0.797721589953364,0,0.34968160967599,0.333109761815663,0,0,0.473193248037357,0.685572168028694,0.42438965179803,0.595303031057488,0.496454756004426,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,1.0470474879476,2.35292595212406,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.436050312760893,0.439372365468944,0,0.139986421625363,0,2.34895648480831,5.07753499407941,2.01656279485478,0.257259436035947,0,1.54701627683233,0.202316460859598,0,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,4.40463523997555,2.29837208553338,3.07213066512487,0.659431438650969,0.457438218012048,0.52091337055676,2.23346399201105,0.56276261003168,1.68078072554491,0.883885756421003,0.284743361598206,0.559198337475902,0.37863096666592,0.453429360640713,7.8263411949453,0,4.75979933595425,0.539703191637817,0,0.896053774194671,0.280888840263504,0.340860645156116,0,0.35333957451034,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0,0.34255163915718,0.776813650941515,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0,0.578397427679647,0,0.485300549842228,1.10420759230197,0,0,4.9772735491963,2.51336048176146,0,12.9400334466394,7.7987355029143,5.08280908292259,2.39665023047716,2.28750301409313,0.125654352112864,1.91206752211504,1.02286182932132,3.1168206683934,1.46017136760982,0.509196819251581,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.30140963567143,0.408218994907967,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,2.1066395619397,3.08817488537658,2.27330799516474,0.414251545071004,0,0.540186184383045,0,0.590292695242212,0.308534225774757,0.930135779001631,0.268273401399619,0.350296027101508,1.31647879930784,0.492502392237286,0.405344047729279,0.438599962275997,0.658650345873152,0.134206418760372,1.26173969138476,0.308713837137853,0.991256348951394,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,0.251335208800269,0.198956472041151,0.779856348476481,0,0,0.398282546508734,0.569003702859245,0.456994050438915,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,1.32849133181642,0.470996183524124,0.616985819609003,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0,0.324270453550071,0,4.31304619582064,0.744281895337007,0,0.252578877947112,0,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,2.72936002979246,2.10981035865966,0.163934945376675,2.01976741763498,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0.395287777946524,2.89189184779626,0.567760340833074,0.178065603667255,0.488660878060728,0.659880491890142,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0.532020700926821,1.07021290561242,1.31639216481697,3.95804433848979,0.469343416127421,0.847328283455281,0,0.49465875882444,0.322928853391811,0.72375509913787,0.238744688006273,0.328281799490123,0.582961673259701,2.22510362412612,0.341741761595705,0.206386867963223,0,0.565105371014073,0.546776910884101,0,19.2075625893056,22.112329467138,12.9907975376158,0,0.316335993581135,0,0,0.627264888043406,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.704143431874524,0.5208175393758,0.838874755405687,0.483168241652012,0.288030006257865,0,1.01362607645082,0.410843828659309,0.51968329191118,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0,1.36038230169127,0.887943813496259,0.807424709485281,0.839423081820392,0.386379188064381,0.187682475451182,0.549454872801795,1.07184189539533,0,2.25900737046827,1.84130094602871,0.572895513439397,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,3.60256962579376,3.62513927187364,2.5888015587591,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.618105171716683,0,0.252697211763798,1.01391719956096,0.943131706930381,0.37456602987953,0.512201219238954,0.746661096422973,0.476293691283074,0.115884325944855,0.38581844092741,0.4120859008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|short_description=p4@Bhlhe40
}}

Revision as of 08:28, 14 September 2013

Short description:p4@Bhlhe40
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Bhlhe40_5end
Coexpression cluster:MCL_coexpression_mm9:34
Association with transcript: -182bp_to_ENSMUST00000032194, NM_011498, uc009ddn.1_5end
EntrezGene:Bhlhe40
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Bhlhe40

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain2.39e-1447
future brain2.39e-1447
regional part of nervous system3.78e-1454
regional part of brain2.34e-1346
neural tube3.56e-1252
neural rod3.56e-1252
future spinal cord3.56e-1252
neural keel3.56e-1252
central nervous system4.07e-1273
nervous system1.45e-1175
occipital lobe8.34e-1110
visual cortex8.34e-1110
neocortex8.34e-1110
anterior neural tube1.73e-1040
regional part of forebrain1.25e-0939
forebrain1.25e-0939
future forebrain1.25e-0939
neurectoderm1.99e-0964
neural plate1.99e-0964
presumptive neural plate1.99e-0964
ectoderm-derived structure9.38e-0995
ectoderm9.38e-0995
presumptive ectoderm9.38e-0995
pre-chordal neural plate1.96e-0849
ecto-epithelium2.01e-0773







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