FFCP PHASE1:Hg19::chrX:73048926..73048955,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=12810|TSSclassifier=N|UniProt=|association_with_transcript=346bp_to_ENST00000433732_5end|coexpression_cluster_id=C639|description=CAGE_peak_9_at_XIST_5end|id=chrX:73048926..73048955,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000860;8.35e-09;33!CL:0002057;8.35e-09;33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.24e-19!57;UBERON:0005068!1.24e-19!57;UBERON:0006241!1.24e-19!57;UBERON:0007135!1.24e-19!57;UBERON:0002616!5.15e-17!59;UBERON:0002780!5.47e-15!41;UBERON:0001890!5.47e-15!41;UBERON:0006240!5.47e-15!41;UBERON:0003080!2.49e-14!42;UBERON:0001017!2.11e-13!82;UBERON:0002020!3.74e-13!34;UBERON:0003528!3.74e-13!34;UBERON:0003075!1.25e-12!86;UBERON:0007284!1.25e-12!86;UBERON:0002346!1.39e-12!90;UBERON:0005743!1.89e-12!86;UBERON:0000955!2.14e-12!69;UBERON:0006238!2.14e-12!69;UBERON:0001893!2.66e-12!34;UBERON:0002791!3.04e-12!33;UBERON:0001869!1.32e-11!32;UBERON:0000073!5.37e-11!94;UBERON:0001016!5.37e-11!94;UBERON:0007023!9.07e-10!115;UBERON:0003056!5.78e-09!61;UBERON:0002619!1.30e-08!22;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0000033!2.80e-08!123;UBERON:0000153!7.48e-08!129;UBERON:0007811!7.48e-08!129;UBERON:0001950!2.31e-07!20;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0004121!3.06e-07!169;UBERON:0000062!7.98e-07!511;UBERON:0002420!8.46e-07!9;UBERON:0007245!8.46e-07!9;UBERON:0010009!8.46e-07!9;UBERON:0010011!8.46e-07!9;UBERON:0000454!8.46e-07!9|ontology_enrichment_uberon_v019=UBERON:0003528;4.26e-11;34!UBERON:0002020;4.26e-11;34!UBERON:0002791;2.35e-10;32!UBERON:0002780;5.32e-10;41!UBERON:0001890;5.32e-10;41!UBERON:0000073;1.05e-09;53!UBERON:0002616;1.05e-09;53!UBERON:0001869;1.76e-09;32!UBERON:0001893;2.12e-09;34!UBERON:0002619;6.07e-09;22!UBERON:0002420;1.72e-08;9!UBERON:0007245;1.72e-08;9!UBERON:0010009;1.72e-08;9!UBERON:0010011;1.72e-08;9!UBERON:0000454;1.72e-08;9!UBERON:0000125;9.24e-08;9!UBERON:0002308;9.24e-08;9!UBERON:0000956;1.84e-07;25!UBERON:0000203;1.84e-07;25!UBERON:0001950;2.88e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-17,56;UBERON:0005068,1.86e-17,56;UBERON:0006241,1.86e-17,56;UBERON:0007135,1.86e-17,56;UBERON:0000073,1.87e-15,53;UBERON:0002616,1.87e-15,53;UBERON:0002780,1.25e-13,41;UBERON:0001890,1.25e-13,41;UBERON:0003080,1.25e-13,41;UBERON:0006240,1.25e-13,41;UBERON:0003528,3.65e-13,34;UBERON:0002020,3.65e-13,34;UBERON:0001017,9.98e-12,81;UBERON:0002791,1.23e-11,32;UBERON:0003075,2.87e-11,82;UBERON:0007284,2.87e-11,82;UBERON:0002346,5.54e-11,86;UBERON:0001893,1.26e-10,34;UBERON:0000955,1.51e-10,68;UBERON:0006238,1.51e-10,68;UBERON:0001869,1.89e-10,32;UBERON:0001016,2.23e-10,89;UBERON:0002619,4.84e-09,22;UBERON:0002420,1.55e-08,9;UBERON:0007245,1.55e-08,9;UBERON:0010009,1.55e-08,9;UBERON:0010011,1.55e-08,9;UBERON:0000454,1.55e-08,9;UBERON:0010371,3.71e-08,104;UBERON:0000125,5.35e-08,9;UBERON:0002308,5.35e-08,9;UBERON:0003056,1.12e-07,61;UBERON:0000956,1.51e-07,25;UBERON:0000203,1.51e-07,25;UBERON:0001950,2.49e-07,20|phase1_expression=0.726713517082227,3.63970890614671,1.55049844505568,2.00146596706261,0,2.61701557230111,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.684372125364421,0,0.382067028739756,0.328402357799783,0.393553906568396,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,1.16318591023652,4.1566353805769,0,3.25400651667958,4.11167888021826,0,0.863077176966451,2.30544635876191,0,1.72372840368309,0.645484683583826,0,3.01187743268168,2.72906150057846,0,2.14258724659632,3.53021929783703,0,1.31940520074686,3.78980949481101,0,4.35313857942876,7.37600792098482,0,3.26623264833766,4.69334626578181,0,4.23779651843358,3.31449872388808,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0,0,0,0,0,2.84606484554724,1.76171156811282,0,1.32171328579026,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0.950452044448374,0,0,2.49861453104692,0.473554504088034,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,1.84453049955565,0.130979075497713,0,0,0.97364218096405,0.522389211897802,0,1.19245312152671,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,0,1.72101972449288,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.939475989150119,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,2.19488810440419,0,0,0,5.91985797773244,1.49490172172997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,8.87285243752816,0,1.77236972004421,0,0,0.171567810298526,0,0,0.502644862058154,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.50394638459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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12810 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=346bp_to_ENST00000433732_5end | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_9_at_XIST_5end | |||
|id=chrX:73048926..73048955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.35e-09;33!CL:0002057;8.35e-09;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-19!57;UBERON:0005068!1.24e-19!57;UBERON:0006241!1.24e-19!57;UBERON:0007135!1.24e-19!57;UBERON:0002616!5.15e-17!59;UBERON:0002780!5.47e-15!41;UBERON:0001890!5.47e-15!41;UBERON:0006240!5.47e-15!41;UBERON:0003080!2.49e-14!42;UBERON:0001017!2.11e-13!82;UBERON:0002020!3.74e-13!34;UBERON:0003528!3.74e-13!34;UBERON:0003075!1.25e-12!86;UBERON:0007284!1.25e-12!86;UBERON:0002346!1.39e-12!90;UBERON:0005743!1.89e-12!86;UBERON:0000955!2.14e-12!69;UBERON:0006238!2.14e-12!69;UBERON:0001893!2.66e-12!34;UBERON:0002791!3.04e-12!33;UBERON:0001869!1.32e-11!32;UBERON:0000073!5.37e-11!94;UBERON:0001016!5.37e-11!94;UBERON:0007023!9.07e-10!115;UBERON:0003056!5.78e-09!61;UBERON:0002619!1.30e-08!22;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0000033!2.80e-08!123;UBERON:0000153!7.48e-08!129;UBERON:0007811!7.48e-08!129;UBERON:0001950!2.31e-07!20;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0004121!3.06e-07!169;UBERON:0000062!7.98e-07!511;UBERON:0002420!8.46e-07!9;UBERON:0007245!8.46e-07!9;UBERON:0010009!8.46e-07!9;UBERON:0010011!8.46e-07!9;UBERON:0000454!8.46e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.26e-11;34!UBERON:0002020;4.26e-11;34!UBERON:0002791;2.35e-10;32!UBERON:0002780;5.32e-10;41!UBERON:0001890;5.32e-10;41!UBERON:0000073;1.05e-09;53!UBERON:0002616;1.05e-09;53!UBERON:0001869;1.76e-09;32!UBERON:0001893;2.12e-09;34!UBERON:0002619;6.07e-09;22!UBERON:0002420;1.72e-08;9!UBERON:0007245;1.72e-08;9!UBERON:0010009;1.72e-08;9!UBERON:0010011;1.72e-08;9!UBERON:0000454;1.72e-08;9!UBERON:0000125;9.24e-08;9!UBERON:0002308;9.24e-08;9!UBERON:0000956;1.84e-07;25!UBERON:0000203;1.84e-07;25!UBERON:0001950;2.88e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-17,56;UBERON:0005068,1.86e-17,56;UBERON:0006241,1.86e-17,56;UBERON:0007135,1.86e-17,56;UBERON:0000073,1.87e-15,53;UBERON:0002616,1.87e-15,53;UBERON:0002780,1.25e-13,41;UBERON:0001890,1.25e-13,41;UBERON:0003080,1.25e-13,41;UBERON:0006240,1.25e-13,41;UBERON:0003528,3.65e-13,34;UBERON:0002020,3.65e-13,34;UBERON:0001017,9.98e-12,81;UBERON:0002791,1.23e-11,32;UBERON:0003075,2.87e-11,82;UBERON:0007284,2.87e-11,82;UBERON:0002346,5.54e-11,86;UBERON:0001893,1.26e-10,34;UBERON:0000955,1.51e-10,68;UBERON:0006238,1.51e-10,68;UBERON:0001869,1.89e-10,32;UBERON:0001016,2.23e-10,89;UBERON:0002619,4.84e-09,22;UBERON:0002420,1.55e-08,9;UBERON:0007245,1.55e-08,9;UBERON:0010009,1.55e-08,9;UBERON:0010011,1.55e-08,9;UBERON:0000454,1.55e-08,9;UBERON:0010371,3.71e-08,104;UBERON:0000125,5.35e-08,9;UBERON:0002308,5.35e-08,9;UBERON:0003056,1.12e-07,61;UBERON:0000956,1.51e-07,25;UBERON:0000203,1.51e-07,25;UBERON:0001950,2.49e-07,20 | |||
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| |||
|short_description=p9@XIST | |||
}} |
Revision as of 12:30, 14 September 2013
Short description: | p9@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 346bp_to_ENST00000433732_5end |
EntrezGene: | NA |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.86e-17 | 56 |
neural rod | 1.86e-17 | 56 |
future spinal cord | 1.86e-17 | 56 |
neural keel | 1.86e-17 | 56 |
regional part of nervous system | 1.87e-15 | 53 |
regional part of brain | 1.87e-15 | 53 |
regional part of forebrain | 1.25e-13 | 41 |
forebrain | 1.25e-13 | 41 |
anterior neural tube | 1.25e-13 | 41 |
future forebrain | 1.25e-13 | 41 |
brain grey matter | 3.65e-13 | 34 |
gray matter | 3.65e-13 | 34 |
central nervous system | 9.98e-12 | 81 |
regional part of telencephalon | 1.23e-11 | 32 |
neural plate | 2.87e-11 | 82 |
presumptive neural plate | 2.87e-11 | 82 |
neurectoderm | 5.54e-11 | 86 |
telencephalon | 1.26e-10 | 34 |
brain | 1.51e-10 | 68 |
future brain | 1.51e-10 | 68 |
cerebral hemisphere | 1.89e-10 | 32 |
nervous system | 2.23e-10 | 89 |
regional part of cerebral cortex | 4.84e-09 | 22 |
basal ganglion | 1.55e-08 | 9 |
nuclear complex of neuraxis | 1.55e-08 | 9 |
aggregate regional part of brain | 1.55e-08 | 9 |
collection of basal ganglia | 1.55e-08 | 9 |
cerebral subcortex | 1.55e-08 | 9 |
ecto-epithelium | 3.71e-08 | 104 |
neural nucleus | 5.35e-08 | 9 |
nucleus of brain | 5.35e-08 | 9 |
pre-chordal neural plate | 1.12e-07 | 61 |
cerebral cortex | 1.51e-07 | 25 |
pallium | 1.51e-07 | 25 |
neocortex | 2.49e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.