FFCP PHASE1:Mm9::chr8:114535292..114535347,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57321|HGNC=|MCL_coexpression_id=483|UniProt=Q8BPK1|association_with_transcript=0bp_to_uc009nnh.1_5end|description=CAGE_peak_1_at_Terf2ip_5end|id=chr8:114535292..114535347,+|ontology_enrichment_celltype=CL:0000117!4.68e-14!23;CL:0000337!4.68e-14!23;CL:0000540!8.07e-10!33;CL:0000047!8.07e-10!33;CL:0000031!8.07e-10!33;CL:0000404!8.07e-10!33;CL:0000393!3.81e-07!39;CL:0000211!3.81e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-14,23;CL:0000337,4.68e-14,23;CL:0000540,8.07e-10,33;CL:0000047,8.07e-10,33;CL:0000031,8.07e-10,33;CL:0000404,8.07e-10,33;CL:0000393,3.81e-07,39;CL:0000211,3.81e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.18e-23!63;UBERON:0002346!2.10e-23!71;UBERON:0003075!2.10e-23!71;UBERON:0007284!2.10e-23!71;UBERON:0001049!2.62e-22!52;UBERON:0005068!2.62e-22!52;UBERON:0006241!2.62e-22!52;UBERON:0007135!2.62e-22!52;UBERON:0000955!9.16e-22!50;UBERON:0006238!9.16e-22!50;UBERON:0002616!3.55e-21!49;UBERON:0003056!2.55e-20!49;UBERON:0001017!6.60e-20!73;UBERON:0005743!6.60e-20!73;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0003080!1.43e-18!40;UBERON:0000073!1.79e-18!75;UBERON:0001016!1.79e-18!75;UBERON:0002780!7.70e-18!39;UBERON:0001890!7.70e-18!39;UBERON:0006240!7.70e-18!39;UBERON:0002020!5.00e-17!34;UBERON:0002791!1.63e-14!29;UBERON:0003528!1.63e-14!29;UBERON:0001893!1.63e-14!29;UBERON:0000153!8.04e-14!94;UBERON:0007811!1.41e-13!86;UBERON:0004111!9.31e-11!122;UBERON:0000025!6.22e-10!114;UBERON:0000956!1.64e-09!21;UBERON:0001869!1.64e-09!21;UBERON:0000203!1.64e-09!21;UBERON:0000475!1.38e-08!200;UBERON:0002619!1.23e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.60e-24,54;UBERON:0002346,2.24e-23,64;UBERON:0003075,2.24e-23,64;UBERON:0007284,2.24e-23,64;UBERON:0001049,2.62e-22,52;UBERON:0005068,2.62e-22,52;UBERON:0006241,2.62e-22,52;UBERON:0007135,2.62e-22,52;UBERON:0010371,1.24e-21,73;UBERON:0003056,2.55e-20,49;UBERON:0001017,6.60e-20,73;UBERON:0000955,1.21e-19,47;UBERON:0006238,1.21e-19,47;UBERON:0010314,2.94e-19,92;UBERON:0002616,4.54e-19,46;UBERON:0003080,1.43e-18,40;UBERON:0001016,1.79e-18,75;UBERON:0004121,4.29e-18,95;UBERON:0000924,4.29e-18,95;UBERON:0006601,4.29e-18,95;UBERON:0002780,7.70e-18,39;UBERON:0001890,7.70e-18,39;UBERON:0006240,7.70e-18,39;UBERON:0002020,5.00e-17,34;UBERON:0003528,1.63e-14,29;UBERON:0002791,1.63e-14,29;UBERON:0001893,1.63e-14,29;UBERON:0004111,9.31e-11,122;UBERON:0000025,6.22e-10,114;UBERON:0000956,1.64e-09,21;UBERON:0001869,1.64e-09,21;UBERON:0000203,1.64e-09,21;UBERON:0002619,1.23e-07,17|phase1_expression=25.9441132309766,15.0059425284925,12.739978702907,10.2837831844322,10.5188103288733,11.5836697619204,10.0453435456076,18.0772652818207,9.57363310631334,8.42632294759177,5.82141091966717,5.74359544766422,13.6960583944965,18.4457049104085,8.99396356902289,7.28910962603373,11.8925519281785,14.8267217718372,10.8320402548534,11.0341309467488,15.1377056468904,10.0283860712894,9.66439219814061,12.3194165550923,13.3057383018959,9.76194338995534,11.630573896295,14.4365725899546,13.4916627814025,8.31699428207772,9.3126814475228,1.90509202037889,4.30545351309199,0,8.08784535303569,9.64160943079256,9.59595974433135,17.1597968602132,7.813353445238,14.6586648312664,11.7646297606203,13.6609096991689,18.4493934151838,13.09326906946,11.1514624341466,12.2976323948327,10.9534788208725,8.50298109883741,14.2796018777407,9.52706505463989,10.6389680435276,4.31257693094915,11.9125650300993,18.1340535502836,14.452033363126,9.77585856936598,8.30946975822394,10.8291139378263,30.7521020506589,36.5003775697703,29.7900759647904,5.42151251310611,6.22506357277798,4.94944844504769,6.92206453796882,3.5524005747305,5.69240209984969,11.1423308543251,24.1596796678753,25.2461104680262,20.4015212510841,19.1386159550548,21.4242484723065,26.8254850280749,25.5907407618691,19.3035945188104,37.4393995397922,33.1987079021488,34.715076515911,28.0917792865313,33.8504281328916,31.2548022334056,31.8268618861574,37.1423322620909,39.5747461741938,27.4004584490511,25.4845308630394,30.383109669524,9.99585751998029,9.29530189313462,8.11620568364698,11.185510400758,7.47968467078526,12.9528765993076,7.79731700937203,8.51251085484938,13.2017754923847,14.4865774191349,11.950156211732,9.18682893726885,22.8166340038222,8.98285341900225,2.54805239706646,0,6.71122227134764,7.09407623330276,7.58286667522175,13.4736978068491,12.4290184150642,17.2192881315197,15.26670875542,8.8294988710521,13.1450833435953,13.565037649736,18.1086608988985,20.3579877954074,10.3821886448437,10.2665543413137,15.9229899350977,14.235482795372,17.0047969214503,9.21262980956922,11.1835056730873,26.3502717310392,27.4375185925626,10.9846533739694,4.67278985573089,6.59893004092748,6.98886248901856,39.8443100816828,26.0775343606617,38.3245773944236,28.8548371519179,32.2201476236216,33.8694512632083,30.1768749306029,17.9237280376557,12.1918831197891,16.6797020566225,14.0996043443938,18.2168620147785,16.093147310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| ||
|EntrezGene=57321 | |||
|HGNC= | |||
|MCL_coexpression_id=483 | |||
|UniProt=Q8BPK1 | |||
|association_with_transcript=0bp_to_uc009nnh.1_5end | |||
|description=CAGE_peak_1_at_Terf2ip_5end | |||
|id=chr8:114535292..114535347,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.68e-14!23;CL:0000337!4.68e-14!23;CL:0000540!8.07e-10!33;CL:0000047!8.07e-10!33;CL:0000031!8.07e-10!33;CL:0000404!8.07e-10!33;CL:0000393!3.81e-07!39;CL:0000211!3.81e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-14,23;CL:0000337,4.68e-14,23;CL:0000540,8.07e-10,33;CL:0000047,8.07e-10,33;CL:0000031,8.07e-10,33;CL:0000404,8.07e-10,33;CL:0000393,3.81e-07,39;CL:0000211,3.81e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.18e-23!63;UBERON:0002346!2.10e-23!71;UBERON:0003075!2.10e-23!71;UBERON:0007284!2.10e-23!71;UBERON:0001049!2.62e-22!52;UBERON:0005068!2.62e-22!52;UBERON:0006241!2.62e-22!52;UBERON:0007135!2.62e-22!52;UBERON:0000955!9.16e-22!50;UBERON:0006238!9.16e-22!50;UBERON:0002616!3.55e-21!49;UBERON:0003056!2.55e-20!49;UBERON:0001017!6.60e-20!73;UBERON:0005743!6.60e-20!73;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0003080!1.43e-18!40;UBERON:0000073!1.79e-18!75;UBERON:0001016!1.79e-18!75;UBERON:0002780!7.70e-18!39;UBERON:0001890!7.70e-18!39;UBERON:0006240!7.70e-18!39;UBERON:0002020!5.00e-17!34;UBERON:0002791!1.63e-14!29;UBERON:0003528!1.63e-14!29;UBERON:0001893!1.63e-14!29;UBERON:0000153!8.04e-14!94;UBERON:0007811!1.41e-13!86;UBERON:0004111!9.31e-11!122;UBERON:0000025!6.22e-10!114;UBERON:0000956!1.64e-09!21;UBERON:0001869!1.64e-09!21;UBERON:0000203!1.64e-09!21;UBERON:0000475!1.38e-08!200;UBERON:0002619!1.23e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.60e-24,54;UBERON:0002346,2.24e-23,64;UBERON:0003075,2.24e-23,64;UBERON:0007284,2.24e-23,64;UBERON:0001049,2.62e-22,52;UBERON:0005068,2.62e-22,52;UBERON:0006241,2.62e-22,52;UBERON:0007135,2.62e-22,52;UBERON:0010371,1.24e-21,73;UBERON:0003056,2.55e-20,49;UBERON:0001017,6.60e-20,73;UBERON:0000955,1.21e-19,47;UBERON:0006238,1.21e-19,47;UBERON:0010314,2.94e-19,92;UBERON:0002616,4.54e-19,46;UBERON:0003080,1.43e-18,40;UBERON:0001016,1.79e-18,75;UBERON:0004121,4.29e-18,95;UBERON:0000924,4.29e-18,95;UBERON:0006601,4.29e-18,95;UBERON:0002780,7.70e-18,39;UBERON:0001890,7.70e-18,39;UBERON:0006240,7.70e-18,39;UBERON:0002020,5.00e-17,34;UBERON:0003528,1.63e-14,29;UBERON:0002791,1.63e-14,29;UBERON:0001893,1.63e-14,29;UBERON:0004111,9.31e-11,122;UBERON:0000025,6.22e-10,114;UBERON:0000956,1.64e-09,21;UBERON:0001869,1.64e-09,21;UBERON:0000203,1.64e-09,21;UBERON:0002619,1.23e-07,17 | |||
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| |||
|short_description=p1@Terf2ip | |||
}} |
Revision as of 14:49, 14 September 2013
Short description: | p1@Terf2ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Terf2ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_uc009nnh.1_5end |
EntrezGene: | Terf2ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.68e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-14 | 23 |
neuron | 8.07e-10 | 33 |
neuronal stem cell | 8.07e-10 | 33 |
neuroblast | 8.07e-10 | 33 |
electrically signaling cell | 8.07e-10 | 33 |
electrically responsive cell | 3.81e-07 | 39 |
electrically active cell | 3.81e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.60e-24 | 54 |
neurectoderm | 2.24e-23 | 64 |
neural plate | 2.24e-23 | 64 |
presumptive neural plate | 2.24e-23 | 64 |
neural tube | 2.62e-22 | 52 |
neural rod | 2.62e-22 | 52 |
future spinal cord | 2.62e-22 | 52 |
neural keel | 2.62e-22 | 52 |
ecto-epithelium | 1.24e-21 | 73 |
pre-chordal neural plate | 2.55e-20 | 49 |
central nervous system | 6.60e-20 | 73 |
brain | 1.21e-19 | 47 |
future brain | 1.21e-19 | 47 |
structure with developmental contribution from neural crest | 2.94e-19 | 92 |
regional part of brain | 4.54e-19 | 46 |
anterior neural tube | 1.43e-18 | 40 |
nervous system | 1.79e-18 | 75 |
ectoderm-derived structure | 4.29e-18 | 95 |
ectoderm | 4.29e-18 | 95 |
presumptive ectoderm | 4.29e-18 | 95 |
regional part of forebrain | 7.70e-18 | 39 |
forebrain | 7.70e-18 | 39 |
future forebrain | 7.70e-18 | 39 |
gray matter | 5.00e-17 | 34 |
brain grey matter | 1.63e-14 | 29 |
regional part of telencephalon | 1.63e-14 | 29 |
telencephalon | 1.63e-14 | 29 |
anatomical conduit | 9.31e-11 | 122 |
tube | 6.22e-10 | 114 |
cerebral cortex | 1.64e-09 | 21 |
cerebral hemisphere | 1.64e-09 | 21 |
pallium | 1.64e-09 | 21 |
regional part of cerebral cortex | 1.23e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.