FFCP PHASE1:Mm9::chr8:87297330..87297365,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18032|HGNC=|MCL_coexpression_id=1345|UniProt=E9PUH7|association_with_transcript=-35bp_to_ENSMUST00000109764_5end|description=CAGE_peak_5_at_Nfix_5end|id=chr8:87297330..87297365,-|ontology_enrichment_celltype=CL:0002319!2.55e-07!43;CL:0000055!5.28e-07!50;CL:0000117!5.91e-07!23;CL:0000337!5.91e-07!23;CL:0000221!6.90e-07!44;CL:0000133!6.90e-07!44;CL:0002453!9.27e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.01e-08,8;CL:0002609,5.53e-08,6;CL:0002319,5.85e-08,43;CL:0000221,1.21e-07,44;CL:0000133,1.21e-07,44;CL:0000117,3.25e-07,23;CL:0000337,3.25e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.06e-16!52;UBERON:0005068!3.06e-16!52;UBERON:0006241!3.06e-16!52;UBERON:0007135!3.06e-16!52;UBERON:0001017!1.46e-15!73;UBERON:0005743!1.46e-15!73;UBERON:0002020!3.37e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0000955!2.12e-13!50;UBERON:0006238!2.12e-13!50;UBERON:0002791!2.40e-13!29;UBERON:0003528!2.40e-13!29;UBERON:0001893!2.40e-13!29;UBERON:0002616!2.55e-13!49;UBERON:0004121!5.73e-13!102;UBERON:0000924!5.73e-13!102;UBERON:0006601!5.73e-13!102;UBERON:0000033!2.87e-12!63;UBERON:0002780!5.96e-12!39;UBERON:0001890!5.96e-12!39;UBERON:0006240!5.96e-12!39;UBERON:0003080!8.06e-12!40;UBERON:0002346!1.60e-11!71;UBERON:0003075!1.60e-11!71;UBERON:0007284!1.60e-11!71;UBERON:0003056!6.72e-11!49;UBERON:0002619!1.22e-10!17|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.23e-19,21;UBERON:0001869,5.23e-19,21;UBERON:0000203,5.23e-19,21;UBERON:0002020,1.02e-18,34;UBERON:0003528,3.95e-18,29;UBERON:0002791,3.95e-18,29;UBERON:0001893,3.95e-18,29;UBERON:0001049,5.78e-15,52;UBERON:0005068,5.78e-15,52;UBERON:0006241,5.78e-15,52;UBERON:0007135,5.78e-15,52;UBERON:0002619,3.47e-14,17;UBERON:0001017,6.07e-14,73;UBERON:0002616,2.29e-13,46;UBERON:0001016,2.83e-13,75;UBERON:0000073,4.23e-13,54;UBERON:0000955,6.63e-13,47;UBERON:0006238,6.63e-13,47;UBERON:0002780,1.10e-12,39;UBERON:0001890,1.10e-12,39;UBERON:0006240,1.10e-12,39;UBERON:0003080,3.48e-12,40;UBERON:0002346,2.49e-11,64;UBERON:0003075,2.49e-11,64;UBERON:0007284,2.49e-11,64;UBERON:0004121,1.76e-10,95;UBERON:0000924,1.76e-10,95;UBERON:0006601,1.76e-10,95;UBERON:0010371,1.25e-09,73;UBERON:0003056,1.47e-09,49;UBERON:0001954,4.52e-09,7;UBERON:0003022,4.52e-09,7;UBERON:0002421,4.52e-09,7;UBERON:0000349,4.52e-09,7;UBERON:0002600,4.52e-09,7;UBERON:0002021,6.36e-07,10;UBERON:0000411,6.36e-07,10;UBERON:0001950,6.36e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.917733760808408,0.782391344348039,8.93903141159831,22.8473630043851,20.0262796046512,5.73944328663986,5.75010257459886,0,0,0,0,0.286533439938757,0,1.41621522601718,0,1.90149421051854,1.35537812827653,0,0,0,0,2.39680088414724,4.2264013585371,28.7220226094483,48.872149676072,42.0649922702764,0.856952953211411,1.10434270475807,1.34739879136449,1.34183659425531,3.67687514644008,0,0.510749352340751,0.153606533256243,1.31886287730194,1.46380229763855,5.73004707612436,0.279182999001381,0,0.45839474333043,1.17851434189467,0.711858403995515,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.722996784599558,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.34224637609238,2.09446706813455,0,0,0,0,0.149790639404823,0,1.00523481690292,1.73824320192276,1.02286182932132,0.62336413367868,0.648965052271031,0.407357455401265,0.622034853050465,0,1.47309299120532,0,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.562210347358373,0.517406741478031,0,0,0.351902248327898,0.657587197282725,0.834141747676794,2.089512999133,2.46938563689532,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.405344047729279,0,0.219550115291051,0.268412837520744,3.15434922846191,44.6606017726094,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,1.65562047782839,0.481651769963376,0.117211686592203,1.80328439914343,0.757412781613119,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0.321321316421807,1.13552068166615,1.42452482933804,0.977321756121456,2.8044920905331,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,1.2178597964584,0,0,0.441056796109924,0.98931751764888,0.645857706783622,0.72375509913787,0.358117032009409,0.328281799490123,0,1.11255181206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| ||
|EntrezGene=18032 | |||
|HGNC= | |||
|MCL_coexpression_id=1345 | |||
|UniProt=E9PUH7 | |||
|association_with_transcript=-35bp_to_ENSMUST00000109764_5end | |||
|description=CAGE_peak_5_at_Nfix_5end | |||
|id=chr8:87297330..87297365,- | |||
|ontology_enrichment_celltype=CL:0002319!2.55e-07!43;CL:0000055!5.28e-07!50;CL:0000117!5.91e-07!23;CL:0000337!5.91e-07!23;CL:0000221!6.90e-07!44;CL:0000133!6.90e-07!44;CL:0002453!9.27e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.01e-08,8;CL:0002609,5.53e-08,6;CL:0002319,5.85e-08,43;CL:0000221,1.21e-07,44;CL:0000133,1.21e-07,44;CL:0000117,3.25e-07,23;CL:0000337,3.25e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.06e-16!52;UBERON:0005068!3.06e-16!52;UBERON:0006241!3.06e-16!52;UBERON:0007135!3.06e-16!52;UBERON:0001017!1.46e-15!73;UBERON:0005743!1.46e-15!73;UBERON:0002020!3.37e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0000955!2.12e-13!50;UBERON:0006238!2.12e-13!50;UBERON:0002791!2.40e-13!29;UBERON:0003528!2.40e-13!29;UBERON:0001893!2.40e-13!29;UBERON:0002616!2.55e-13!49;UBERON:0004121!5.73e-13!102;UBERON:0000924!5.73e-13!102;UBERON:0006601!5.73e-13!102;UBERON:0000033!2.87e-12!63;UBERON:0002780!5.96e-12!39;UBERON:0001890!5.96e-12!39;UBERON:0006240!5.96e-12!39;UBERON:0003080!8.06e-12!40;UBERON:0002346!1.60e-11!71;UBERON:0003075!1.60e-11!71;UBERON:0007284!1.60e-11!71;UBERON:0003056!6.72e-11!49;UBERON:0002619!1.22e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.23e-19,21;UBERON:0001869,5.23e-19,21;UBERON:0000203,5.23e-19,21;UBERON:0002020,1.02e-18,34;UBERON:0003528,3.95e-18,29;UBERON:0002791,3.95e-18,29;UBERON:0001893,3.95e-18,29;UBERON:0001049,5.78e-15,52;UBERON:0005068,5.78e-15,52;UBERON:0006241,5.78e-15,52;UBERON:0007135,5.78e-15,52;UBERON:0002619,3.47e-14,17;UBERON:0001017,6.07e-14,73;UBERON:0002616,2.29e-13,46;UBERON:0001016,2.83e-13,75;UBERON:0000073,4.23e-13,54;UBERON:0000955,6.63e-13,47;UBERON:0006238,6.63e-13,47;UBERON:0002780,1.10e-12,39;UBERON:0001890,1.10e-12,39;UBERON:0006240,1.10e-12,39;UBERON:0003080,3.48e-12,40;UBERON:0002346,2.49e-11,64;UBERON:0003075,2.49e-11,64;UBERON:0007284,2.49e-11,64;UBERON:0004121,1.76e-10,95;UBERON:0000924,1.76e-10,95;UBERON:0006601,1.76e-10,95;UBERON:0010371,1.25e-09,73;UBERON:0003056,1.47e-09,49;UBERON:0001954,4.52e-09,7;UBERON:0003022,4.52e-09,7;UBERON:0002421,4.52e-09,7;UBERON:0000349,4.52e-09,7;UBERON:0002600,4.52e-09,7;UBERON:0002021,6.36e-07,10;UBERON:0000411,6.36e-07,10;UBERON:0001950,6.36e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.917733760808408,0.782391344348039,8.93903141159831,22.8473630043851,20.0262796046512,5.73944328663986,5.75010257459886,0,0,0,0,0.286533439938757,0,1.41621522601718,0,1.90149421051854,1.35537812827653,0,0,0,0,2.39680088414724,4.2264013585371,28.7220226094483,48.872149676072,42.0649922702764,0.856952953211411,1.10434270475807,1.34739879136449,1.34183659425531,3.67687514644008,0,0.510749352340751,0.153606533256243,1.31886287730194,1.46380229763855,5.73004707612436,0.279182999001381,0,0.45839474333043,1.17851434189467,0.711858403995515,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.722996784599558,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.34224637609238,2.09446706813455,0,0,0,0,0.149790639404823,0,1.00523481690292,1.73824320192276,1.02286182932132,0.62336413367868,0.648965052271031,0.407357455401265,0.622034853050465,0,1.47309299120532,0,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.562210347358373,0.517406741478031,0,0,0.351902248327898,0.657587197282725,0.834141747676794,2.089512999133,2.46938563689532,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.405344047729279,0,0.219550115291051,0.268412837520744,3.15434922846191,44.6606017726094,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,1.65562047782839,0.481651769963376,0.117211686592203,1.80328439914343,0.757412781613119,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0.321321316421807,1.13552068166615,1.42452482933804,0.977321756121456,2.8044920905331,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,1.2178597964584,0,0,0.441056796109924,0.98931751764888,0.645857706783622,0.72375509913787,0.358117032009409,0.328281799490123,0,1.11255181206306,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0,0.352071715937262,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,1.81384306892169,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.214368379079066,0.501572104035363,3.3885110557024,2.30162618253588,2.86447756719698,1.3748254587495,2.74033007908257,1.5107877947794,0.675022500231806,2.2516060161211,1.35942722695261,0.51776031175182,0,0,0.853668028770671,3.64660075602441,1.25767897576789,1.2869045591501,1.77797382241292,2.47242068686673,1.60459604795908,3.28506375292937,2.28131369901216,1.88626341386076,1.21733959710847,1.28050304809739,1.83793500657962,0.952587382566147,1.85414921511769,0.964546102318525,1.23625770240992,1.61918812147837,1.02860775715625,2.30718548007139,2.38436189947321,0.726732083161643,1.03520318456864,1.52306294205018,1.64635175585495,0.526139422875686,1.62964936615034,0,1.18635018124174,1.47756723563345,0.818462086339379,1.08455788830176,1.15743966588685,5.49583271463481,0.701794825336225,1.28922632428979,0.956441660344217,1.98532277207564,1.15933917810211 | |||
|short_description=p5@Nfix | |||
}} |
Revision as of 16:18, 14 September 2013
Short description: | p5@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nfix_5end |
Coexpression cluster: | MCL_coexpression_mm9:1345 |
Association with transcript: | -35bp_to_ENSMUST00000109764_5end |
EntrezGene: | Nfix |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.01e-08 | 8 |
neuron of cerebral cortex | 5.53e-08 | 6 |
neural cell | 5.85e-08 | 43 |
ectodermal cell | 1.21e-07 | 44 |
neurectodermal cell | 1.21e-07 | 44 |
CNS neuron (sensu Vertebrata) | 3.25e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.25e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.