FFCP PHASE1:Mm9::chr9:69608895..69608900,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=319970|HGNC=|MCL_coexpression_id=2470|UniProt=|association_with_transcript=-52bp_to_ENSMUST00000140133,NR_040765_5end|description=CAGE_peak_2_at_B230323A14Rik_5end|id=chr9:69608895..69608900,+|ontology_enrichment_celltype=CL:0000117!2.03e-25!23;CL:0000337!2.03e-25!23;CL:0000540!1.59e-16!33;CL:0000047!1.59e-16!33;CL:0000031!1.59e-16!33;CL:0000404!1.59e-16!33;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0002319!8.69e-12!43;CL:0000221!1.96e-11!44;CL:0000133!1.96e-11!44;CL:0000055!1.31e-09!50;CL:0002613!4.24e-09!3;CL:0002614!1.02e-08!3;CL:0000120!1.08e-08!3|ontology_enrichment_celltype_v019_2=CL:0002613,3.27e-44,3;CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002614,2.49e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!7.39e-15!6;UBERON:0002420!6.21e-12!8;UBERON:0007245!6.21e-12!8;UBERON:0010009!6.21e-12!8;UBERON:0010011!6.21e-12!8;UBERON:0000454!6.21e-12!8;UBERON:0002950!4.94e-11!4;UBERON:0001891!4.94e-11!4;UBERON:0009616!4.94e-11!4;UBERON:0001017!2.09e-10!73;UBERON:0005743!2.09e-10!73;UBERON:0002240!2.39e-10!6;UBERON:0005174!2.39e-10!6;UBERON:0001137!2.39e-10!6;UBERON:0000073!5.35e-10!75;UBERON:0001016!5.35e-10!75;UBERON:0003076!4.24e-09!12;UBERON:0003057!4.24e-09!12;UBERON:0001049!6.60e-09!52;UBERON:0005068!6.60e-09!52;UBERON:0006241!6.60e-09!52;UBERON:0007135!6.60e-09!52;UBERON:0002038!1.02e-08!3;UBERON:0002308!1.02e-08!3;UBERON:0009663!1.02e-08!3;UBERON:0009661!1.02e-08!3;UBERON:0006331!1.02e-08!3;UBERON:0000125!1.02e-08!3;UBERON:0001948!1.68e-08!5;UBERON:0002315!1.68e-08!5;UBERON:0002020!3.30e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.19e-45,8;UBERON:0007245,1.19e-45,8;UBERON:0010009,1.19e-45,8;UBERON:0010011,1.19e-45,8;UBERON:0000454,1.19e-45,8;UBERON:0000369,6.27e-27,5;UBERON:0002435,6.27e-27,5;UBERON:0000204,6.27e-27,5;UBERON:0010082,6.27e-27,5;UBERON:0002038,2.49e-20,3;UBERON:0009663,2.49e-20,3;UBERON:0009661,2.49e-20,3;UBERON:0000125,2.49e-20,3;UBERON:0002308,2.49e-20,3;UBERON:0002950,1.58e-15,4;UBERON:0001891,1.58e-15,4;UBERON:0009616,1.58e-15,4;UBERON:0010286,1.58e-15,4;UBERON:0003528,5.02e-13,29;UBERON:0002791,5.02e-13,29;UBERON:0001893,5.02e-13,29;UBERON:0002020,3.54e-11,34;UBERON:0002780,8.49e-10,39;UBERON:0001890,8.49e-10,39;UBERON:0006240,8.49e-10,39;UBERON:0003080,1.46e-09,40;UBERON:0002616,2.30e-08,46;UBERON:0000955,3.41e-08,47;UBERON:0006238,3.41e-08,47;UBERON:0003056,7.12e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.94e-07,52;UBERON:0005068,1.94e-07,52;UBERON:0006241,1.94e-07,52;UBERON:0007135,1.94e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.56e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,1.18697658957174,2.10421580285542,2.08365348222704,0.279182999001381,1.68828783009504,1.68078072554491,0,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0|short_description=p2@B230323A14Rik}} | ||
|EntrezGene=319970 | |||
|HGNC= | |||
|MCL_coexpression_id=2470 | |||
|UniProt= | |||
|association_with_transcript=-52bp_to_ENSMUST00000140133,NR_040765_5end | |||
|description=CAGE_peak_2_at_B230323A14Rik_5end | |||
|id=chr9:69608895..69608900,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.03e-25!23;CL:0000337!2.03e-25!23;CL:0000540!1.59e-16!33;CL:0000047!1.59e-16!33;CL:0000031!1.59e-16!33;CL:0000404!1.59e-16!33;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0002319!8.69e-12!43;CL:0000221!1.96e-11!44;CL:0000133!1.96e-11!44;CL:0000055!1.31e-09!50;CL:0002613!4.24e-09!3;CL:0002614!1.02e-08!3;CL:0000120!1.08e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.27e-44,3;CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002614,2.49e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!7.39e-15!6;UBERON:0002420!6.21e-12!8;UBERON:0007245!6.21e-12!8;UBERON:0010009!6.21e-12!8;UBERON:0010011!6.21e-12!8;UBERON:0000454!6.21e-12!8;UBERON:0002950!4.94e-11!4;UBERON:0001891!4.94e-11!4;UBERON:0009616!4.94e-11!4;UBERON:0001017!2.09e-10!73;UBERON:0005743!2.09e-10!73;UBERON:0002240!2.39e-10!6;UBERON:0005174!2.39e-10!6;UBERON:0001137!2.39e-10!6;UBERON:0000073!5.35e-10!75;UBERON:0001016!5.35e-10!75;UBERON:0003076!4.24e-09!12;UBERON:0003057!4.24e-09!12;UBERON:0001049!6.60e-09!52;UBERON:0005068!6.60e-09!52;UBERON:0006241!6.60e-09!52;UBERON:0007135!6.60e-09!52;UBERON:0002038!1.02e-08!3;UBERON:0002308!1.02e-08!3;UBERON:0009663!1.02e-08!3;UBERON:0009661!1.02e-08!3;UBERON:0006331!1.02e-08!3;UBERON:0000125!1.02e-08!3;UBERON:0001948!1.68e-08!5;UBERON:0002315!1.68e-08!5;UBERON:0002020!3.30e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.19e-45,8;UBERON:0007245,1.19e-45,8;UBERON:0010009,1.19e-45,8;UBERON:0010011,1.19e-45,8;UBERON:0000454,1.19e-45,8;UBERON:0000369,6.27e-27,5;UBERON:0002435,6.27e-27,5;UBERON:0000204,6.27e-27,5;UBERON:0010082,6.27e-27,5;UBERON:0002038,2.49e-20,3;UBERON:0009663,2.49e-20,3;UBERON:0009661,2.49e-20,3;UBERON:0000125,2.49e-20,3;UBERON:0002308,2.49e-20,3;UBERON:0002950,1.58e-15,4;UBERON:0001891,1.58e-15,4;UBERON:0009616,1.58e-15,4;UBERON:0010286,1.58e-15,4;UBERON:0003528,5.02e-13,29;UBERON:0002791,5.02e-13,29;UBERON:0001893,5.02e-13,29;UBERON:0002020,3.54e-11,34;UBERON:0002780,8.49e-10,39;UBERON:0001890,8.49e-10,39;UBERON:0006240,8.49e-10,39;UBERON:0003080,1.46e-09,40;UBERON:0002616,2.30e-08,46;UBERON:0000955,3.41e-08,47;UBERON:0006238,3.41e-08,47;UBERON:0003056,7.12e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.94e-07,52;UBERON:0005068,1.94e-07,52;UBERON:0006241,1.94e-07,52;UBERON:0007135,1.94e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.56e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,1.18697658957174,2.10421580285542,2.08365348222704,0.279182999001381,1.68828783009504,1.68078072554491,0,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@B230323A14Rik | |||
}} |
Revision as of 18:37, 14 September 2013
Short description: | p2@B230323A14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B230323A14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2470 |
Association with transcript: | -52bp_to_ENSMUST00000140133, NR_040765_5end |
EntrezGene: | B230323A14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.27e-44 | 3 |
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
neuron of the substantia nigra | 2.49e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.