FFCP PHASE1:Hg19::chr1:151032040..151032115,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17719 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRR8 | |||
|association_with_transcript=0bp_to_ENST00000357235,ENST00000483763,ENST00000492796_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_CDC42SE1_5end | |||
|id=chr1:151032040..151032115,- | |||
|ontology_enrichment_celltype=CL:0000738!7.55e-40!140;CL:0000988!1.31e-33!182;CL:0000037!3.31e-33!172;CL:0000566!3.31e-33!172;CL:0002032!1.12e-32!165;CL:0000837!1.12e-32!165;CL:0002087!2.55e-31!119;CL:0002031!4.31e-30!124;CL:0000766!5.04e-26!76;CL:0000763!1.32e-21!112;CL:0000049!1.32e-21!112;CL:0000557!2.25e-21!71;CL:0002057!3.39e-21!42;CL:0002009!5.29e-21!65;CL:0002194!6.18e-20!63;CL:0000576!6.18e-20!63;CL:0000040!6.18e-20!63;CL:0000559!6.18e-20!63;CL:0000839!3.72e-19!70;CL:0000860!1.30e-18!45;CL:0000791!8.92e-11!18;CL:0000789!8.92e-11!18;CL:0002420!8.92e-11!18;CL:0002419!8.92e-11!18;CL:0000790!8.92e-11!18;CL:0000542!3.49e-10!53;CL:0000051!3.49e-10!53;CL:0000838!4.95e-10!52;CL:0000084!4.39e-09!25;CL:0000827!4.39e-09!25;CL:0000625!1.03e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-15;33!CL:0002057;1.34e-15;33!CL:0000576;2.59e-14;48!CL:0000473;6.15e-14;39!CL:0000234;6.15e-14;39!CL:0000766;1.31e-12;69!CL:0000791;8.95e-11;18!CL:0000789;8.95e-11;18!CL:0002419;8.95e-11;18!CL:0002087;9.31e-11;104!CL:0000738;4.04e-09;136!CL:0000084;4.33e-09;25!CL:0000625;1.02e-07;11!CL:0000763;2.60e-07;100!CL:0000988;6.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.54e-42,136;CL:0000988,4.86e-35,177;CL:0000037,7.15e-35,168;CL:0002032,2.24e-34,161;CL:0000837,2.24e-34,161;CL:0002087,1.97e-33,115;CL:0002031,4.46e-32,120;CL:0000766,1.23e-28,72;CL:0000557,9.66e-24,67;CL:0002009,1.65e-23,61;CL:0000763,2.75e-23,108;CL:0000049,2.75e-23,108;CL:0002194,2.11e-22,59;CL:0000576,2.11e-22,59;CL:0000040,2.11e-22,59;CL:0000559,2.11e-22,59;CL:0000473,5.10e-22,48;CL:0000234,5.10e-22,48;CL:0000839,2.35e-21,66;CL:0000860,3.39e-21,42;CL:0002057,3.39e-21,42;CL:0000791,8.92e-11,18;CL:0000789,8.92e-11,18;CL:0002420,8.92e-11,18;CL:0002419,8.92e-11,18;CL:0000790,8.92e-11,18;CL:0000542,3.49e-10,53;CL:0000051,3.49e-10,53;CL:0000838,4.95e-10,52;CL:0000084,4.39e-09,25;CL:0000827,4.39e-09,25;CL:0000625,1.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-15;42!CL:0000790;8.95e-11;18!CL:0000049;8.41e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.44e-25!102;UBERON:0003061!9.44e-25!102;UBERON:0002193!7.64e-24!112;UBERON:0003081!1.35e-16!216;UBERON:0002371!1.24e-15!80;UBERON:0001474!1.51e-14!86;UBERON:0002405!1.15e-10!115;UBERON:0000178!1.04e-09!15;UBERON:0000179!1.04e-09!15;UBERON:0000463!1.04e-09!15;UBERON:0004765!2.27e-09!101;UBERON:0001434!2.27e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-09;15!UBERON:0000179;1.03e-09;15!UBERON:0000463;1.03e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.55e-27,98;UBERON:0003061,9.55e-27,98;UBERON:0002193,1.19e-25,108;UBERON:0002405,4.45e-18,93;UBERON:0002371,2.49e-17,76;UBERON:0003081,2.26e-16,203;UBERON:0001474,4.53e-16,82;UBERON:0004765,1.09e-13,90;UBERON:0000178,1.04e-09,15;UBERON:0000179,1.04e-09,15;UBERON:0000463,1.04e-09,15;UBERON:0001434,5.41e-09,100 | |||
|phase1_expression=68.856105743541,56.5225383072195,59.0598953162119,56.041047077753,57.2110200866928,50.5956343978214,43.0609792886128,42.3252315195977,38.6554729735761,102.716785457631,126.302011403009,150.069222653428,132.411023070684,40.3478310649752,55.6747591222898,67.2325146451775,74.7341214749731,67.9188384060257,77.0933822089001,73.2570295556888,71.6042426267328,84.3193200776056,60.682029271784,68.9847102367336,58.3773274115833,67.7786908984328,62.7248503397586,55.8059439513986,407.525390815465,265.609943483271,205.286179517117,102.97517714164,138.855928556773,147.901604066715,49.3466067696521,49.6170621381101,45.2144676575665,291.401584887768,337.716849539719,293.615708078548,124.944834625878,111.743314776548,111.272645217969,295.158424722516,232.015829424929,262.718538266405,304.946896420258,182.969710169712,215.555634142992,234.18160735023,194.169815549058,200.53693094552,240.63248515416,189.772496973645,255.956059663306,296.669927119145,213.958421645351,238.431616996235,332.101023222429,239.733983225842,267.882255709798,233.204869232008,170.341963608874,215.669723769543,484.939637748364,322.842192849259,406.080106345115,188.687747607814,161.659704710262,181.569874173478,339.023721474687,325.557430213007,357.91896019564,200.058756137409,239.392441760639,156.19569090374,211.51481244885,231.122238083078,169.886945138814,164.167340394959,236.11409583532,174.992259306519,228.79511779972,273.069305631066,252.62062809725,249.637180201407,213.010665103159,247.718301620382,267.062128605084,211.799933506851,278.91435486363,321.218742585904,259.56352189703,97.8067831484791,169.834094583405,55.3106578027662,265.361479883561,264.496243330188,287.636497100313,322.168376617837,249.982378507964,247.613202399266,288.343558043709,308.495555115046,263.377681282504,304.166037263312,366.939235401596,307.803441300797,292.763591357286,270.17147726384,252.860266274051,339.649216481482,329.789316472422,301.786054085196,350.194004746672,314.433425985746,248.710100347647,273.183819158691,274.77938553318,328.12237675382,341.81881327462,325.054599201344,335.029639948044,346.971702839628,422.265855746929,369.846067692754,315.313150817682,253.621282976713,225.452085045497,204.057585070864,80.4562658836074,60.3630773733273,36.8244178109367,48.0714072671473,47.6271015104095,54.3174446103089,92.2531698579275,127.011701148988,72.9808788506604,68.0709250210071,73.2542112680671,55.2731698600347,172.675966650665,182.055161407155,116.187966928377,115.099756354816,126.177104532403,96.5887028436635,112.111002512905,85.8066828071295,50.2868890637764,62.7971254427471,73.9409268424176,89.3186548239935,60.8274182504364,56.6743166396539,69.8043188232947,64.6041897923322,76.133980214956,72.6343729699334,91.0394256666672,82.8696595233179,72.4864310918064,69.1206591050233,79.3939108924124,64.4744038211056,58.3776368828042,57.7696894879443,88.9236497302123,92.0787689781085,68.1510487421115,1013.39141008333,1128.44056867163,187.956536473432,59.6366342034382,65.088082995594,123.80258406036,98.0981242960943,50.0082418899683,51.5823392130923,77.9267668826846,60.4335493622042,47.3040773807645,59.5421170548021,55.577047058576,77.0409306712701,73.1743424089599,83.6527511646654,38.0835293732991,46.2082175451004,37.9599648601575,42.0415505144678,42.7344573131867,38.0621686163093,41.4432967647433,38.0786383666481,37.5072585668029,46.3321114340001,44.5080472701402,70.082424869228,76.1735230325213,34.0038950187214,36.1592522429976,35.1871426664912,28.0945677363736,49.0380473278431,30.7988020758523,79.4025282120147,90.7711556585642,53.1757898158233,56.3738857084435,96.3292418430931,51.423212089981,112.331275459894,61.2324457330931,82.1940738014967,71.8110728038034,71.4387581110844,51.6399931383299,39.2799918069713,104.017810607368,62.5670529993646,59.8548890856021,123.300424318183,130.64539176301,94.6455164783713,41.9589549085808,45.325180765948,41.7136254901571,42.0863883362404,41.6329403944787,41.2424415755688,70.4022895484172,52.7457569318166,96.6944449467364,45.9724248751659,29.597058748453,58.4435592196829,54.4528548952268,52.0583824548321,61.7646247301406,57.5201732403952,59.0803841586631,56.2246555027886,49.4478092115872,44.2459230488349,88.5786545549578,120.607925470963,64.2055457676984,77.9146170343372,30.4212083572394,90.4201039343416,34.2658145875214,40.6146051461479,49.810317609961,48.8968259350798,168.027686960606,206.81922599402,85.0475106602397,116.661440899747,104.584466004614,64.4759566873339,63.5057904911202,58.6607849173889,40.3885908171227,81.1339436417235,59.2621456098062,61.8325994762444,131.964134459199,142.508702907749,154.378062816798,159.59090882496,139.713292551405,119.041969163207,110.364258226651,117.673330711181,140.696439166175,121.194352360322,120.382161257876,110.849228526587,103.897152135607,148.446930727193,194.994296973149,121.571463389604,97.3422719498951,119.562377199741,114.873098265846,123.172161136348,86.9920588270117,74.4850783452915,74.8865253492115,77.4825792826443,54.49500860416,68.5712972425883,76.9166708758778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| |||
|short_description=p1@CDC42SE1 | |||
}} |
Revision as of 20:47, 10 January 2014
Short description: | p1@CDC42SE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC42SE1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000357235, ENST00000483763, ENST00000492796_5end |
EntrezGene: | CDC42SE1 |
HGNC: | 17719 |
UniProt: | Q9NRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.55e-27 | 98 |
blood island | 9.55e-27 | 98 |
hemolymphoid system | 1.19e-25 | 108 |
immune system | 4.45e-18 | 93 |
bone marrow | 2.49e-17 | 76 |
lateral plate mesoderm | 2.26e-16 | 203 |
bone element | 4.53e-16 | 82 |
skeletal element | 1.09e-13 | 90 |
blood | 1.04e-09 | 15 |
haemolymphatic fluid | 1.04e-09 | 15 |
organism substance | 1.04e-09 | 15 |
skeletal system | 5.41e-09 | 100 |